KEGG   ORTHOLOGY: K14577Help
Entry
K14577                      KO                                     

Name
E4.1.2.46
Definition
aliphatic (R)-hydroxynitrile lyase [EC:4.1.2.46]
Pathway
Cyanoamino acid metabolism
Brite
KEGG Orthology (KO) [BR:ko00001]
 Metabolism
  Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    K14577  E4.1.2.46; aliphatic (R)-hydroxynitrile lyase
Enzymes [BR:ko01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.2  Aldehyde-lyases
    4.1.2.46  aliphatic (R)-hydroxynitrile lyase
     K14577  E4.1.2.46; aliphatic (R)-hydroxynitrile lyase
BRITE hierarchy
Other DBs
Genes
AG: 
TaxonomyKoalaUniProt
Reference
PMID:9030531
  Authors
Trummler K, Wajant H
  Title
Molecular cloning of acetone cyanohydrin lyase from flax (Linum usitatissimum). Definition of a novel class of hydroxynitrile lyases.
  Journal
J Biol Chem 272:4770-4 (1997)
DOI:10.1074/jbc.272.8.4770
  Sequence
LinkDB All DBs

KEGG   ORTHOLOGY: K13033Help
Entry
K13033                      KO                                     

Name
E4.1.2.47
Definition
(S)-hydroxynitrile lyase [EC:4.1.2.47]
Pathway
Cyanoamino acid metabolism
Brite
KEGG Orthology (KO) [BR:ko00001]
 Metabolism
  Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    K13033  E4.1.2.47; (S)-hydroxynitrile lyase
Enzymes [BR:ko01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.2  Aldehyde-lyases
    4.1.2.47  (S)-hydroxynitrile lyase
     K13033  E4.1.2.47; (S)-hydroxynitrile lyase
BRITE hierarchy
Other DBs
Genes
AG: 
AAC49184(HNL) CAA82334(HNL)
TaxonomyKoalaUniProt
Reference
PMID:8621461
  Authors
Hasslacher M, Schall M, Hayn M, Griengl H, Kohlwein SD, Schwab H
  Title
Molecular cloning of the full-length cDNA of (S)-hydroxynitrile lyase from Hevea  brasiliensis. Functional expression in Escherichia coli and Saccharomyces cerevisiae and identification of an active site residue.
  Journal
J Biol Chem 271:5884-91 (1996)
DOI:10.1074/jbc.271.10.5884
  Sequence
Reference
PMID:8203915
  Authors
Hughes J, Carvalho FJ, Hughes MA
  Title
Purification, characterization, and cloning of alpha-hydroxynitrile lyase from cassava (Manihot esculenta Crantz).
  Journal
Arch Biochem Biophys 311:496-502 (1994)
DOI:10.1006/abbi.1994.1267
  Sequence
LinkDB All DBs

KEGG   ENZYME: 4.1.2.46Help
Entry
EC 4.1.2.46                 Enzyme                                 

Name
aliphatic (R)-hydroxynitrile lyase;
(R)-HNL;
(R)-oxynitrilase;
(R)-hydroxynitrile lyase;
LuHNL
Class
Lyases;
Carbon-carbon lyases;
Aldehyde-lyases
BRITE hierarchy
Sysname
(2R)-2-hydroxy-2-methylbutanenitrile butan-2-one-lyase (cyanide forming)
Reaction(IUBMB)
(2R)-2-hydroxy-2-methylbutanenitrile = cyanide + butan-2-one [RN:R09358]
Reaction(KEGG)
R09358;
(other) R01553 R02811
Show
Substrate
(2R)-2-hydroxy-2-methylbutanenitrile [CPD:C18796]
Product
cyanide [CPD:C00177];
butan-2-one [CPD:C02845]
Comment
The enzyme contains Zn2+ [1]. The enzyme catalyses the stereoselective synthesis of aliphatic (R)-cyanohydrins [1]. No activity towards mandelonitrile and 4-hydroxymandelonitrile [5]. Natural substrates for the (R)-oxynitrilase from Linum usitatissimum are acetone and butan-2-one, which are the building blocks of the cyanogen glycosides in Linum, linamarin and lotaustralin, or linustatin and neolinustatin, respectively [4].
History
EC 4.1.2.46 created 2011
Pathway
Cyanoamino acid metabolism
Biosynthesis of secondary metabolites
Orthology
K14577  
aliphatic (R)-hydroxynitrile lyase
Reference
1
  Authors
Trummler, K., Roos, J., Schwaneberg, U., Effenberger, F., Forster, S., Pfizenmaier, K. and Wajant, H.
  Title
Expression of the Zn2+-containing hydroxynitrile lyase from flax (Linum usitatissimum) in Pichia pastoris- utilization of the recombinant enzyme for enzymatic analysis and site-directed mutagenesis.
  Journal
Plant Sci. 139 (1998) 19-27.
Reference
2  [PMID:9030531]
  Authors
Trummler K, Wajant H
  Title
Molecular cloning of acetone cyanohydrin lyase from flax (Linum usitatissimum). Definition of a novel class of hydroxynitrile lyases.
  Journal
J. Biol. Chem. 272 (1997) 4770-4.
  Sequence
Reference
3
  Authors
Albrecht, J., Jansen, I.and Kula, M.R.
  Title
Improved purification of an (R)-oxynitrilase from Linum usitatissimum (flax) and investigation of the substrate range.
  Journal
Biotechnol. Appl. Biochem. 17 (1993) 191-203.
Reference
4  [PMID:3377504]
  Authors
Xu LL, Singh BK, Conn EE.
  Title
Purification and characterization of acetone cyanohydrin lyase from Linum usitatissimum.
  Journal
Arch. Biochem. Biophys. 263 (1988) 256-63.
  Sequence
Reference
5
  Authors
Cabirol, F.L., Tan, P.L., Tay, B., Cheng, S., Hanefeld, U. and Sheldon, R.A.
  Title
Linum usitatissimum hydroxynitrile lyase cross-linked enzyme aggregates: a recyclable enantioselective catalyst.
  Journal
Adv. Synth. Catal. 350 (2008) 2329-2338.
Reference
6
  Authors
Breithaupt, H., Pohl, M., Bonigk, W., Heim, P., Schimz, K.-L. and Kula, M.-R.
  Title
Cloning and expression of (R)-hydroxynitrile lyase from Linum usitatissimum (flax).
  Journal
J. Mol. Catal. B 6 (1999) 315-332.
Other DBs
ExplorEnz - The Enzyme Database: 
IUBMB Enzyme Nomenclature: 
ExPASy - ENZYME nomenclature database: 
BRENDA, the Enzyme Database: 
LinkDB All DBs

KEGG   ENZYME: 4.1.2.47Help
Entry
EC 4.1.2.47                 Enzyme                                 

Name
(S)-hydroxynitrile lyase;
(S)-cyanohydrin producing hydroxynitrile lyase;
(S)-oxynitrilase;
(S)-HbHNL;
(S)-MeHNL;
hydroxynitrile lyase;
oxynitrilase;
HbHNL;
MeHNL;
(S)-selective hydroxynitrile lyase;
(S)-cyanohydrin carbonyl-lyase (cyanide forming)
Class
Lyases;
Carbon-carbon lyases;
Aldehyde-lyases
BRITE hierarchy
Sysname
(S)-cyanohydrin lyase (cyanide forming)
Reaction(IUBMB)
(1) an aliphatic (S)-hydroxynitrile = cyanide + an aliphatic aldehyde or ketone;
(2) an aromatic (S)-hydroxynitrile = cyanide + an aromatic aldehyde [RN:R09359]
Reaction(KEGG)
R09359;
(other) R01409 R02811
Show
Substrate
aliphatic (S)-hydroxynitrile;
aromatic (S)-hydroxynitrile
Product
cyanide [CPD:C01326];
aliphatic aldehyde;
aliphatic ketone;
aromatic aldehyde [CPD:C00193]
Comment
Hydroxynitrile lyases catalyses the the cleavage of hydroxynitriles into cyanide and the corresponding aldehyde or ketone. In nature the liberation of cyanide serves as a defense mechanism against herbivores and microbial attack in plants. In vitro the enzymes from Manihot esculenta and Hevea brasiliensis accept a broad range of aliphatic and aromatic carbonyl compounds as substrates and catalyse the formation of (S)-hydroxynitriles [1,10].
History
EC 4.1.2.47 created 2011
Pathway
Cyanoamino acid metabolism
Biosynthesis of secondary metabolites
Orthology
K13033  
(S)-hydroxynitrile lyase
Reference
1
  Authors
Forster, S., Roos, J., Effenberger, F., Wajant, H. and Sprauer, A.
  Title
The first recombinant hydroxynitrile lyase and its application in the synthesis of (S)-cyanohydrins.
  Journal
Angew. Chem. Int. Ed. 35 (1996) 437-439.
Reference
2  [PMID:12616635]
  Authors
Buhler H, Effenberger F, Forster S, Roos J, Wajant H
  Title
Substrate specificity of mutants of the hydroxynitrile lyase from Manihot esculenta.
  Journal
Chembiochem. 4 (2003) 211-6.
Reference
3  [PMID:18540112]
  Authors
Semba H, Dobashi Y, Matsui T
  Title
Expression of hydroxynitrile lyase from Manihot esculenta in yeast and its application in (S)-mandelonitrile production using an immobilized enzyme reactor.
  Journal
Biosci. Biotechnol. Biochem. 72 (2008) 1457-63.
Reference
4  [PMID:19006143]
  Authors
Avi M, Wiedner RM, Griengl H, Schwab H
  Title
Improvement of a stereoselective biocatalytic synthesis by substrate and enzyme engineering: 2-hydroxy-(4'-oxocyclohexyl)acetonitrile as the model.
  Journal
Chemistry. 14 (2008) 11415-22.
Reference
5  [PMID:18204865]
  Authors
von Langermann J, Guterl JK, Pohl M, Wajant H, Kragl U
  Title
Hydroxynitrile lyase catalyzed cyanohydrin synthesis at high pH-values.
  Journal
Bioprocess. Biosyst. Eng. 31 (2008) 155-61.
Reference
6  [PMID:18524775]
  Authors
Schmidt A, Gruber K, Kratky C, Lamzin VS
  Title
Atomic resolution crystal structures and quantum chemistry meet to reveal subtleties of hydroxynitrile lyase catalysis.
  Journal
J. Biol. Chem. 283 (2008) 21827-36.
Reference
7  [PMID:17250917]
  Authors
Gartler G, Kratky C, Gruber K
  Title
Structural determinants of the enantioselectivity of the hydroxynitrile lyase from Hevea brasiliensis.
  Journal
J. Biotechnol. 129 (2007) 87-97.
Reference
8  [PMID:15299689]
  Authors
Wagner UG, Schall M, Hasslacher M, Hayn M, Griengl H, Schwab H, Kratky C
  Title
Crystallization and preliminary X-ray diffraction studies of a hydroxynitrile lyase from Hevea brasiliensis.
  Journal
Acta. Crystallogr. D. Biol. Crystallogr. 52 (1996) 591-3.
Reference
9
  Authors
Schmidt, M., Herve, S., Klempier, N. and Griengl, H.
  Title
Preparation of optically active cyanohydrins using the (S)-hydroxynitrile lyase from Hevea brasiliensis.
  Journal
Tetrahedron 52 (1996) 7833-7840.
Reference
10
  Authors
Klempier, N. and Griengl, H.
  Title
Aliphatic (S)-cyanohydrins by enzyme catalyzed synthesis.
  Journal
Tetrahedron Lett. 34 (1993) 4769-4772.
Other DBs
ExplorEnz - The Enzyme Database: 
IUBMB Enzyme Nomenclature: 
ExPASy - ENZYME nomenclature database: 
BRENDA, the Enzyme Database: 
LinkDB All DBs

KEGG   REACTION: R01553Help
Entry
R01553                      Reaction                               

Name
acetone-cyanohydrin acetone-lyase (cyanide-forming)
Definition
Acetone cyanohydrin <=> Hydrogen cyanide + Acetone
Equation
Reaction class
C00207_C02659
C01326_C02659
Enzyme
Pathway
Cyanoamino acid metabolism
Biosynthesis of secondary metabolites
Orthology
K13033  
(S)-hydroxynitrile lyase [EC:4.1.2.47]
LinkDB All DBs

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