Paracidovorax avenae: Acav_1203
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Entry
Acav_1203 CDS
T01445
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
aaa
Paracidovorax avenae
Brite
KEGG Orthology (KO) [BR:
aaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaa03021
]
Acav_1203
Transcription machinery [BR:
aaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Acav_1203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
UBM
TpcC
Motif
Other DBs
NCBI-ProteinID:
ADX45125
UniProt:
F0QCY2
LinkDB
All DBs
Position
1344842..1345471
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AA seq
209 aa
AA seq
DB search
MNASLPPPSPADSDLQLVERTVSGDQRAYGLLVVKYQRRIERLIGRMVRDSDLVQDIAQE
TFLRAYRALHQFRGEAQFYTWLYRIAVNTAKKALMDIKRNPVISENALRGGEDEDETSRI
GHELTTDETPETVMAAQEIAAAVNTAMEALPEDLRQAVTLREIEGLTYEEIAEVMQCPIG
TVRSRIFRAREAISARVRPLLEKQTGKRW
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcttccctgcccccgccttcccctgccgacagcgacctccagctcgtggagcgc
accgtgtccggcgaccagcgggcctacgggctgctggtcgtgaaataccagcgccgcatc
gaacgcctcatcggccgcatggtgcgcgactcggacctggtgcaggacatcgcccaggaa
accttcctgcgcgcctaccgtgcactgcaccagttccgcggggaagcgcagttctacacc
tggctctaccgcatcgcggtcaacacggcgaagaaggccttgatggacatcaagcgcaat
cccgtcatttccgagaacgcattgcgcggcggagaagacgaggatgaaacttcccgtatc
ggacacgaactaaccaccgacgaaacgccggaaaccgtgatggccgcgcaggagatcgcc
gctgcggtcaacacggccatggaagcgttgccggaggatctgcgccaggcggtcacgctg
cgcgagatcgaaggcctgacctatgaggaaatcgccgaggtgatgcagtgccccatagga
acggtgcgatcgaggatattccgtgcccgggaggcgatttccgcccgggtacggccattg
ctggaaaagcagacaggcaagcgctggtga
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