Aquifex aeolicus: aq_1732
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Entry
aq_1732 CDS
T00013
Name
(RefSeq) phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
aae
Aquifex aeolicus
Pathway
aae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
aq_1732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aae03019
]
aq_1732
Messenger RNA biogenesis [BR:
aae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
aq_1732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DivIVA
HrpE
KhpA-B_KH
REF
Motif
Other DBs
NCBI-GeneID:
1193337
NCBI-ProteinID:
NP_214188
UniProt:
O67622
LinkDB
All DBs
Position
1220470..1222146
Genome browser
AA seq
558 aa
AA seq
DB search
MDVLSILLILVAVGVGIFVGRQFLGQKQAPAPTYQPVPSPQILEEAKSKAEEIIKEAKEK
AEVILKEAKESAEKIVREAEEKAEKLIREAKEEVERIKEEVERRKKELKEREENVLAKER
HLDRRWEALEKREEELLHRERELKDFERSLERWRDEIRHKEEELKHMKEEVEELKKKELE
ELQRIAKLTLEEARQEIIKKVEEEAKKDAVKLMKVIEEDAKRRAEFEAKKIIATATQRLA
PQIAVNYTTTTVELPSNEFKGRIIGREGRNIRTFEILTGVDLIIDDTPDIVTISSFDPLR
REIAKEALQRLIADGRIHPARIEEVVDEVKREFDEKIRKIGEETVYELDLHDINPGLYYY
IGKLYFRTSYSQNVLLHSKEVAYIAGLMAEELGLDAKLARRAGLLHDIGKAISHELGGSH
TDIGVELARKYGEPDAVINAIRAHHEEEPVRYPEVALVCAADALSAARPGARRETLEAYI
RRLEKLEEIVKSFKGVANAYAVQAGREVRVIVNPEEISDEEAYLLSKEIPKKIEEELDFP
GQIKVVVIRETRHVEYAK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggacgttcttagtattcttttaatccttgttgcagttggagtaggcatttttgtagga
agacaatttttgggacaaaaacaagcccctgcacctacatatcagccagtgccctctcct
caaatactggaagaagccaaaagtaaggcggaagagataataaaagaggctaaagaaaag
gcagaagtaatactaaaagaagctaaggaaagcgcggagaagatagtaagggaggcggaa
gaaaaggcggagaaactcataagggaagctaaggaagaagttgaaaggataaaggaggaa
gtagaaaggaggaagaaggaattaaaggagagagaggaaaatgtactcgcaaaagaaaga
cacctggacaggagatgggaagcccttgagaagagggaagaggaactcctccacagggaa
agggaacttaaggattttgaaagaagtctggaaaggtggagagacgaaataagacacaag
gaagaagagctaaaacacatgaaagaggaagtggaagaactaaagaaaaaagaacttgaa
gaactccagaggatagcaaagctcactttagaagaggcaaggcaggagataataaagaag
gttgaagaagaggcgaagaaggacgccgtaaaactcatgaaagtcatagaagaagacgca
aagaggagggcggagtttgaagccaagaagataatagcgaccgcaacccagagactcgct
ccccagatagcggtaaactacaccacgaccaccgtagaactccccagcaacgagttcaag
ggaaggataataggtagggaaggaaggaacataagaacctttgaaatactcacaggtgtt
gacctcataatagacgacactccggacatcgtgactatatcttcctttgaccccttaagg
agagaaatagcaaaagaagccctccagaggctcatagcggacgggagaattcacccagcg
aggattgaagaagtagttgatgaagtaaagagggagtttgacgaaaagataagaaaaatt
ggtgaagagaccgtttacgagcttgaccttcacgacataaaccccggactctactactac
ataggaaagctctacttcagaacaagctattcccagaacgtcctcttacactccaaggaa
gttgcctatatagcgggactaatggcagaagagctcggacttgacgcaaagctcgcaagg
agagcgggactccttcacgacataggaaaggctatttctcacgaactcggaggttctcac
acggacataggcgtagagcttgcaaggaagtacggagagcccgacgcagtaataaacgcc
ataagggcacaccacgaggaagaacccgtaagatatcccgaggttgccctcgtttgtgca
gcggatgccctttcggctgcaagaccgggagccagaagggaaacccttgaagcttacata
aggagacttgagaaactcgaagaaatagtgaagtccttcaagggagtagcgaacgcatat
gcagtacaggcgggaagggaagtaagagttatagtaaatcccgaggagatttctgacgaa
gaggcttacttgctcagtaaagaaatacccaagaagatagaagaagaactggactttccc
ggccagataaaggtggtagtgataagggagacgaggcacgtggagtacgccaagtaa
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