KEGG   Apteryx australis mantelli (brown kiwi): 106493957Help
Entry
106493957         CDS       T04298                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
aam  Apteryx australis mantelli (brown kiwi)
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:aam00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    106493957 (LIG4)
Enzymes [BR:aam01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     106493957 (LIG4)
DNA repair and recombination proteins [BR:aam03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     106493957 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Un
AA seq 913 aa AA seqDB search
MASTPASQPSPKKTVASQVPFADLCCTLERMQTCKSRPEKNKYFKDFLDSWRRFHDALHQ
KEKDVTDSFYPAMRLILPQLERERMAYGIKEIMLAKLYIELLNLPKDGKDAAKLLNYRTP
AGSRGDAGDFAMIAYFVLKPRCPKQGRLTIEQVNELLDAIANNNAAKNKGLLKKSLLQLI
SQSSALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPTVSL
SDVSIMLFSAFKPMLAAIADVQQIEKQMNHQIFYIETKLDGERMQMHKDGDVYKYFSRNG
YDYTQQFGASPREGSLTPFIHKVFKSNVQNCILDGEMMAYNPETQTFMQKGNKFDIKRMV
EESDLQTCYCVFDVLMVNDQKLGHETLTKRYEILSGIFTPVTGRIHAVHKTSARTRKEVI
DALNEAIDNREEGIMVKDPMSTYKPDKRGEGWLKIKPEYVSGLMDELDLLIVGGYWGKGS
RGGMMSHFLCAIAETPPPNEKPSIFHSICRVGSGYTMKELYDLGLKLAKHWKPYHRKDPP
CNILCGTEKPEVYIEPFNSVIVQIKAAEIVNSDMYKTDCTLRFPRIERIREDKEWYECMT
SDMLEHLRSKAEGKLASKHLHIDDDDEPQEKKKKTVPKVKKVIGIAEQFKAPDLSNINKI
SNVFEDVEFCVMTGTGRYLKSELESRIAECGGSVVQNPGPDTYCVIVGTENVRVKNIIAS
NKYDVVKAEWLLQCFQTKMLVPWQPAFMIHMCPDTKEHFAREYDCYGDSYTADADVAQLK
EVFSRMKDNNKMLSLDVIAELEERYSWNSCQLSIFRGNTIYVDCYAVVNEPRTKIHGTRL
SIRALELRFYGAKVVPHLEEGVSHVVIGEDHSRVKEMKALRRTFGKKFKIVSELWVTESV
EEGVPKNENQYLI
NT seq 2742 nt NT seq  +upstreamnt  +downstreamnt
atggcttctacacctgcttcacagccttctcctaaaaaaacagtagcctctcaggtgcct
tttgcagatctatgctgtactctggagcgaatgcagacatgtaaatctcggccagaaaaa
aacaaatatttcaaggattttctggattcctggaggaggttccatgatgctctccatcaa
aaggagaaagatgttacagattctttttaccctgcaatgcgacttattcttccacagttg
gaaagagaaaggatggcatatggaattaaagaaattatgcttgcaaagctgtatattgaa
ctgcttaatttaccaaaagatggaaaagatgctgcaaagcttttaaattacagaacacct
gctggctcacgtggagatgctggagactttgcaatgattgcatactttgtattaaaacct
aggtgcccaaaacaaggcagactgacaatagaacaagtcaacgaactcttagatgcaata
gctaataataatgctgccaaaaacaagggtctattaaagaaaagtctccttcagttaatt
tctcagagctcagcacttgaacaaaaatggcttatccggatgattataaaggatctaaaa
cttggtgttagtcaacaaactatattttccatttttcatcctgatgctgctgaattacac
aatgtcacaactgatttggaaaaagtctgtagacaactacatgatcccactgtctcactt
agtgatgtttctatcatgttattttctgcctttaaaccaatgcttgctgctattgctgac
gtccagcaaattgagaaacaaatgaatcatcagatattctacatagaaactaaactggat
ggtgagcgtatgcagatgcacaaagatggagatgtatataagtatttttcccgaaatggg
tatgactatactcagcagtttggtgcttcaccccgtgaaggttcattaactccgtttatt
cataaagtatttaaaagcaatgtgcaaaattgcattcttgatggtgaaatgatggcttac
aatcctgagacacaaacattcatgcaaaaaggaaacaaatttgacataaaaagaatggtg
gaggaatctgatctgcagacttgctactgtgtgtttgatgtattaatggttaacgatcaa
aagttgggccatgaaacactaaccaaaagatacgagatcttaagtggcatatttacccca
gtaacaggtagaatacatgctgtacataaaacaagtgccagaactagaaaagaagtaatt
gatgctttaaatgaagcaatagataatagagaggaaggaattatggtgaaagatcccatg
tccacttacaagcctgacaaacgtggggaaggctggttaaaaatcaagccggaatatgtc
agtgggttgatggatgaactagaccttttgattgttggcggttactggggaaagggctcc
cgtggtggaatgatgtctcattttttgtgtgctattgcggaaactccacctccaaatgaa
aaacctagtattttccactctatttgtcgtgttggctctggttatactatgaaggaattg
tatgatctgggtttgaaactggctaaacactggaagccctaccataggaaggaccctcca
tgcaacattttgtgtggaactgaaaaacctgaagtgtacattgaaccttttaactctgta
atagttcagattaaggcagctgagattgttaacagtgatatgtataaaactgactgtact
ttgagattcccccgaatcgagagaataagagaggacaaggaatggtatgaatgcatgact
tcagacatgttagaacatctcagaagcaaagcagaagggaagctggcctctaaacacctt
catatagatgatgatgatgagccacaagagaaaaaaaagaaaactgtaccaaaggtgaag
aaggtaattggaatagcagagcagtttaaagcccctgatctttctaatataaacaagatt
tcaaatgtattcgaagatgttgaattttgtgttatgacaggaacaggaagatatttgaag
tctgaattagaaagcagaatagctgagtgtggtggaagtgtggtacagaaccctggacca
gacacttactgtgtcattgtaggaactgagaatgtcagagtgaaaaacatcattgcttcc
aacaagtatgatgtggtgaaggcagagtggctcctccagtgttttcaaaccaaaatgctt
gtaccttggcagcctgcctttatgattcatatgtgtcctgacacaaaagaacattttgct
cgtgaatatgattgttacggagacagctatacagcagatgcagatgttgcacaactaaag
gaagtgttctcaagaatgaaagataataataagatgttgtctttggacgtgattgctgaa
ttagaagaacgttattcatggaacagctgccaactcagtatattcagaggaaacactatt
tatgtggactgttatgctgttgttaatgaacccagaacaaaaatccatggaacaagacta
tcaattagagcgttggagctccgattttatggtgcaaaagtagtccctcacctagaagag
ggtgtgtcgcatgtcgttataggagaagatcactcccgggtaaaagagatgaaagcactg
aggagaacatttggtaaaaaatttaaaattgtatctgagctgtgggtaactgagtcggta
gaggaaggagtcccaaagaatgaaaatcaatatttaatttaa

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