Aggregatibacter aphrophilus NJ8700: NT05HA_1501
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Entry
NT05HA_1501 CDS
T00929
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aap
Aggregatibacter aphrophilus NJ8700
Pathway
aap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NT05HA_1501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aap03021
]
NT05HA_1501
03019 Messenger RNA biogenesis [BR:
aap03019
]
NT05HA_1501
Transcription machinery [BR:
aap03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NT05HA_1501
Messenger RNA biogenesis [BR:
aap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NT05HA_1501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_22
AAA_25
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ACS97840
LinkDB
All DBs
Position
1505635..1506897
Genome browser
AA seq
420 aa
AA seq
DB search
MHLTELKNMPVSDLVKLGEDQMGLENLARLRKQDIVFAILKQHAKGGEDIFGGGVLEILP
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKIRPPKEGERYFALLKVDQV
NDDKPEVSRSKILFENLTPLHANSRLRMERGNGSTEDLTARILDLASPIGKGQRGLIVAP
PKAGKTMLLQNIAQSITHNYPDVELIVLLIDERPEEVTEMQRSVKGEVIASTFDEPATRH
VQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRKIAEKRVFPAID
FNRSGTRKEDLLTTPDELQKMWILRKILNPMGEVEAMEFLIDKLAVAKTNEEFFEIMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttacagaacttaaaaatatgcctgtttccgatctcgtgaaactcggcgaagac
caaatgggtttagaaaatttagcccgtttacgcaaacaagatattgtttttgcgattttg
aagcagcacgccaaaggtggggaagatattttcggtggcggcgtcttggaaattttaccg
gacggttttggatttctacgttcggcggacagttcctatttagctggtcctgatgatatc
tatgtttccccaagccaaattcgtcgtttcaatttgcaaacaggggacaaaatcgaaggt
aaaattcgaccgccgaaagaaggcgaacgctactttgccctcctcaaagttgaccaagtc
aatgacgacaaaccggaagtttcccgcagcaaaatccttttcgaaaacttaaccccatta
cacgccaactcccgtttaagaatggaacgcggcaacggctctaccgaagatttaaccgcc
cgtattttagatttagcctcccctatcgggaaaggtcagcgtggcttgatcgtagcacca
ccgaaagcgggtaaaaccatgttgttgcaaaatatcgcgcaaagcattacccacaactat
cctgatgtcgaacttatcgtattactgatcgatgaacgtccggaagaagtaacggaaatg
cagcgctccgtaaaaggcgaagtgattgcttctacctttgacgaaccggcaactcgtcac
gtccaagtggcagaaatggtaatcgaaaaagccaaacgttctgtagagcacaaaaaagat
gtggtgattttgctcgattccatcacccgtttagcccgcgcatacaataccgtgacaccg
gcatccggtaaaattttatccggtggtgtagacgccaacgcattacaccgtccaaaacgt
ttcttcggtgcagcacgtaacgtggaagaaggcggtagcttaaccattatcgcaacggca
ttagtagataccggctccaaaatggacgaagtcatcttcgaagaatttaaaggtacaggt
aacatggaattacatctttcccgtaaaattgcggaaaaacgcgtattccccgctatcgac
ttcaaccgttcaggcacccgtaaagaagacttgcttaccacccctgacgagctgcaaaaa
atgtggatcctacgcaaaatccttaacccaatgggcgaagtggaagcgatggaattcctt
atcgacaaactcgccgtggcgaaaaccaacgaagagttttttgagattatgaaacgctca
taa
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