Paracidovorax citrulli: Aave_1196
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Entry
Aave_1196 CDS
T00451
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
aav
Paracidovorax citrulli
Brite
KEGG Orthology (KO) [BR:
aav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aav03019
]
Aave_1196
03009 Ribosome biogenesis [BR:
aav03009
]
Aave_1196
03036 Chromosome and associated proteins [BR:
aav03036
]
Aave_1196
Enzymes [BR:
aav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Aave_1196
Messenger RNA biogenesis [BR:
aav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Aave_1196
Ribosome biogenesis [BR:
aav03009
]
Eukaryotic type
90S particles
RNase
Aave_1196
Prokaryotic type
rRNA processing factors
Aave_1196
Chromosome and associated proteins [BR:
aav03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Aave_1196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ABM31788
UniProt:
A1TLF0
LinkDB
All DBs
Position
1316723..1317409
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AA seq
228 aa
AA seq
DB search
MVSPSLSALQDRLQHVFSDPSLLQRATTHRSFSADHNERLEFLGDSVLNLAVSSLLYQRL
RDLPEGDLSRVRANLVRQEALHSLALGLQLPQVLRLGEGETKSGGKQRPSILADALEALI
GAVYLDAGYQCAEALVHRLYQDVEINPRMPAAEKDAKTALQEWLQGRKMKLPQYRVVATV
GAAHRQTFDVECDIPELGLTERGIGGSRRAGEQAAAAAMLATLKAKHP
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
ttggtttcacccagcctttccgcgctgcaggaccgcctgcagcatgttttctccgatcca
tccctgctgcagcgggccaccacgcaccgcagcttctcggccgaccataacgaacgcctg
gagtttctcggcgactcggtgctgaacctggccgtatcgagcctgctctaccagcgcctg
cgcgacctgccggaaggcgatctctcccgggtgcgcgccaacttggtgcgccaggaggcg
ctgcacagcctggccctgggcctgcagttgccgcaggtgctgcgcctgggcgagggggag
acgaaatccggtggcaagcagcgcccgtccatcctggccgatgccctggaagccctgatc
ggggccgtctacctggatgccggctaccagtgcgccgaggcgctggtgcaccggctctac
caggacgtggagatcaatcctcgcatgccggcggccgagaaggatgccaagaccgcattg
caggagtggctgcagggccgcaaaatgaagctgccgcagtaccgcgtggtcgccacggtg
ggggctgcccaccggcagaccttcgacgtggaatgcgacatcccggaactgggcctgacc
gagcgcggcatcggcggatcgcggagggcgggcgaacaggctgccgccgccgccatgctg
gccaccctgaaagcgaaacacccatga
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