Alteromonas stellipolaris R10SW13: AVL56_01440
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Entry
AVL56_01440 CDS
T04403
Symbol
lacZ
Name
(GenBank) beta-D-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Pathway
aaw00052
Galactose metabolism
aaw00511
Other glycan degradation
aaw00600
Sphingolipid metabolism
aaw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
AVL56_01440 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
AVL56_01440 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
AVL56_01440 (lacZ)
Enzymes [BR:
aaw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
AVL56_01440 (lacZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_72
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
AMJ93096
LinkDB
All DBs
Position
345629..348805
Genome browser
AA seq
1058 aa
AA seq
DB search
MANVAQVVAQKDWQNPVVFQRNRVNGHSPLNGFVTQDDAKQNVNAQKQSLNGEWEFRLYP
QPEAVDEDLLSEELSEAANWQPITVPSNWQMQGFDKPIYCNVKYPFPVNPPEVPSDNPTG
CYRTTFSVTENALQQRNHIVFEGVNSAFHLWCNGEYVGYSQDSRLPAEFNLTSFLKAGEN
RLAVMVIRWSDGSYLEDQDMWWLSGIFRDVVLVTKPQHHIQDVFATPKLDACYRDGSLDV
RTAINAPASYTVGIQLFDGETAVTEQSVSGTNNRRIDEKGGWDDVIFQSLAITEPKKWTA
ETPYLYRLVVTLFDDAGDVVVAEGYNIGFRQIDMLDGQLCVNGKPILIRGVNRHEHHESK
GHAVNEADMIEDIKLLKQNNFNAVRTAHYPNHPRWYELCDEYGLYLVDEANIETHGMFPM
GRLSRDALWAGAYLARYTQMVERDKNHASIIIWSLGNECGHGPNQDAMYGWSKAFDPSRP
VQYEGGGANTTATDIIAPMYARVDTDVLDDAVPKWAIKKWLSLPGETRPVILCEYAHAMG
NSLGSFTDYWQAFKDYPRLQGGFIWDWVDQGLVKHTDSGEAYWAYGGDFGDIDNDRQFCI
NGLLFPDRTPHPALFEAKYCQQHLAFTLKALEHEQAGRYQLTITSDYVFRSTDNEALHWQ
LLENGECVASGTKTLSIGPQSSQTLTIKPNFKFVPDATYHLNIDVVLANDCDWANAGHVL
DTEQFEIANTAGFSVFTSANTNTGDATNGENKDEGKAKAQDKLTVEHTESKVSIQATSNC
FVLNADTGLLTSWLVDGEEQLSAPLEDNFFRAPLDNDIGVSEVDNPDPNAWESRWRRAGI
GQWQRNCAGVDVVVSTQDVRVTALFNYHYDNALVASTSWCYRVNATGTLDLDVQVKLADA
LPPMPRIGLQWAVPRSSQAEAKIQWKGLGPFENYPDRLAAARFGSYSESIACMHTPYIFP
TDNGLRSNCRELSINAIKVAGDFHFAVSPYGQKQLDEAKHTCDLTPADNTYVYLDHAHMG
VGGDDSWSPSTHKAFLLEKKAYRYHLSLSALKASAENC
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgttgctcaagttgttgcgcaaaaagattggcagaaccctgtcgtatttcaa
agaaatcgcgtgaatggacatagtccattaaacggttttgtaacccaagacgatgctaaa
caaaatgttaatgcgcaaaaacaaagtttaaatggtgaatgggaatttaggttatacccc
caacctgaagccgttgatgaagacttactgagcgaagagctgtctgaagctgcaaactgg
caacctattactgtaccttcaaattggcaaatgcagggttttgataagcctatctactgc
aatgtcaaatatccttttccggtaaacccacctgaagtacctagcgataaccccacaggc
tgctaccgtactactttttcggtaactgaaaatgcgttgcagcagcgtaaccatatcgtg
tttgaaggggttaatagcgcgtttcacctgtggtgtaatggtgaatacgtaggttattcg
caagatagccgtctaccggctgaattcaatttaacgtcctttttaaaagccggtgaaaat
cgcttagcggttatggttattcgctggtctgatggcagctatttagaagatcaagacatg
tggtggttaagtggcattttccgcgatgtggtgctggtaacaaagccacaacaccatatt
caagatgtatttgctacaccaaaactagatgcttgttatcgcgacggcagtttagatgtg
cgcaccgccattaacgcaccagcaagctatacggtgggtattcagttatttgatggtgaa
actgccgttaccgaacaaagtgtgtcgggcaccaataaccgccgtatagatgagaaaggc
gggtgggacgatgtgatatttcaatcgttagccatcaccgagcctaagaagtggacggca
gagactccctatttatatcgcttagtcgtgacattatttgacgatgcgggtgatgtggtg
gtggccgaaggttacaacataggttttcgtcagatagatatgcttgatggccagttatgc
gttaacggaaagcctattcttattcgtggtgtaaataggcacgagcatcacgaaagcaaa
ggtcatgcggtaaatgaagccgacatgattgaagatataaaactattaaagcaaaacaac
ttcaatgcagtacgcaccgcccactacccaaatcatccacgttggtacgaactgtgtgat
gaatatggtttgtacttagtagatgaagcgaacattgaaacccacggtatgtttcctatg
gggcgattgtcgagagatgcattgtgggcaggcgcttatttagcccgctacacacaaatg
gtagaacgagataaaaatcatgcttcaattatcatttggtcattaggtaatgaatgtggc
cacggaccgaaccaagatgccatgtacggttggtctaaagcgtttgacccttcgcgacct
gtgcaatacgaaggcggtggtgccaacactaccgcaaccgatattatcgcccctatgtat
gctcgggtagataccgatgtgctagatgacgccgtgcctaaatgggcaattaaaaagtgg
ttatcgttacctggtgaaacccgccctgttattttgtgtgagtacgcccatgccatgggg
aatagtttagggagctttacggactactggcaggcatttaaagactatccccgtttacaa
ggtggcttcatatgggattgggtcgatcaaggcttagtaaagcatacagacagcggtgag
gcttattgggcatacggtggcgactttggtgatatcgacaacgaccgtcagttttgcatt
aatggtttgttgtttcccgatcgcacgccacacccagcattatttgaagctaaatactgc
caacagcacttagcatttacgcttaaagcactagagcacgaacaagctggcagatatcaa
ttaaccattaccagtgactatgtattccgctcaaccgataacgaagcactgcattggcaa
ttactggaaaacggagagtgcgttgccagcggcactaaaacactaagtattggcccccag
tcgtcacaaacgttaacgattaaaccaaattttaagtttgtacctgatgcgacatatcac
ttgaatattgatgtagtgctagcaaacgactgtgattgggcgaatgctgggcatgtgtta
gataccgagcagttcgagattgctaacaccgctggattctctgtttttacatcggccaac
accaatactggtgacgccacaaatggcgagaacaaagacgagggcaaagccaaagctcaa
gataaattaacggtagagcacactgaatcgaaggtgagtattcaggcgacaagcaattgt
ttcgttcttaatgctgacactgggttacttacgtcatggctagttgatggcgaagagcag
ttaagtgcaccattggaagataactttttcagggcaccgttagacaatgatattggtgta
agtgaagtggataaccccgaccctaatgcgtgggagtcacgttggcgccgagctggaata
gggcaatggcaacgcaactgtgcaggtgtcgatgtagttgtaagcacacaagacgtgcgg
gtgacggcactgtttaactatcattacgataatgccttagtggcatcaacaagctggtgt
taccgcgtgaatgctacaggcacattagacttagatgttcaggttaagttagccgatgca
ttacctccgatgccgcgtattggtttgcagtgggccgtgcctcgttcaagtcaggctgaa
gcaaagattcagtggaaggggttaggcccatttgagaactaccccgaccggttagcagca
gctagatttgggagttacagtgaaagtattgcctgcatgcatacgccttacatctttcct
accgacaacgggcttcgtagtaattgccgagaacttagcattaacgctataaaagtagcg
ggtgattttcactttgctgtaagcccgtacgggcaaaagcagcttgatgaagctaaacac
acctgcgacctaacgccagccgacaatacctatgtgtatttagaccatgcccacatgggg
gtaggaggcgatgattcgtggagcccgagtacacacaaagcctttttgttagagaaaaaa
gcgtatcggtatcacttaagcttgagtgctttaaaagccagtgctgaaaattgctaa
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