Alteromonas stellipolaris R10SW13: AVL56_06920
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Entry
AVL56_06920 CDS
T04403
Name
(GenBank) 23S rRNA pseudouridylate synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
aaw
Alteromonas stellipolaris R10SW13
Brite
KEGG Orthology (KO) [BR:
aaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aaw03009
]
AVL56_06920
Enzymes [BR:
aaw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
AVL56_06920
Ribosome biogenesis [BR:
aaw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AVL56_06920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
GO-like_E_set
DUF3603
Motif
Other DBs
NCBI-ProteinID:
AMJ96484
LinkDB
All DBs
Position
complement(1602504..1603448)
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AA seq
314 aa
AA seq
DB search
MKEQTQQSVRFVTVEPDLAGQRVDNFLRTQLKGVPKSMIYRILRKGEVRVNKGRVKPEYK
LVADDVVRIPPVRVSEGTPGPSPKLDKIAALESQILFEDERIIVINKPSGIAVHGGSGLS
FGLIEGLRALRPDANFMELVHRLDRDTSGCILIAKKRSALRHMHEQLRTGKMDKRYQALV
AGQWPENRFKVKAPLRKNVLQSGERMVSVSEDGKPSETRYRILQKFDTATLVEASPITGR
THQIRVHCLHAEHPIACDPKYGDAEFDESMRQKGLNRLFLHAHSISLIHPGTEERVKFTA
PLDATLTNTLKALS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacaaacccaacaatcagtccgtttcgttaccgttgaacccgatttagcaggg
caacgtgtagacaattttttgcgcacccaattaaaaggcgtgcccaaaagtatgatttat
cgcatcttgcgtaaaggtgaagtgcgcgtaaataagggtagagtaaaacccgaatataaa
ctcgttgccgatgatgtagtgcgtattccgcctgtacgtgtatcagaaggaacaccaggc
ccatcgcccaaactcgataaaattgcagcgctagaatctcaaatattgtttgaagacgag
cgcattattgtaattaataaaccttcaggcattgctgttcatggtggcagtggtttgagc
tttggtctcattgaaggcttacgcgcactgcgccccgatgctaattttatggaattggtg
caccgtttagacagagacacctctggctgtattttaattgctaagaaacgttcggcgctt
cgtcatatgcatgagcagttgcgtaccggtaaaatggataagcgctaccaagcattagtg
gcagggcagtggcctgaaaaccgttttaaagtaaaagcgccacttcgtaagaatgtgttg
cagtctggtgaacgcatggtgagcgtgagtgaagatggcaagccatccgaaacccgttac
cgcatattgcaaaaattcgacaccgccactttggtagaagcttcacctattacaggtaga
acccaccaaatccgagttcactgtttacacgctgagcatcctattgcttgcgaccctaaa
tacggtgatgccgagtttgatgagtctatgcgtcaaaaagggttaaaccgcttatttttg
cacgcacatagcatttcgctaattcatcctggcacagaagagcgggttaaatttaccgca
ccgttagatgccacgttaaccaataccttaaaagcgttgtcataa
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