Acinetobacter baumannii TCDC-AB0715: ABTW07_3190
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Entry
ABTW07_3190 CDS
T01908
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
KO
K03086
RNA polymerase primary sigma factor
Organism
abd
Acinetobacter baumannii TCDC-AB0715
Pathway
abd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
abd00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABTW07_3190 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abd03021
]
ABTW07_3190 (rpoD)
Transcription machinery [BR:
abd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABTW07_3190 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TMPIT
CDC45
Motif
Other DBs
NCBI-ProteinID:
ADX93610
LinkDB
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Position
3408808..3410694
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AA seq
628 aa
AA seq
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MSDMHSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQMLQDVGIPVHER
APESDDTMFGESADATDEVAEEEAAAVLASVENEPGRTTDPVRMYMREMGTVELLTREGE
ISIAKRIEEGIRDVLNSIAYWPNAVEVVLKEYNDFLTGERRLADILSGYLDPETDEDIPE
VLEDVEELEEEDESSTKSTKEVKLDDDDEEEESEGDDDSEGDSGPDPEVAKVRFAELEAA
WAQTKAVIEKHGRNSPEANEALESLATVFMMFKFTPRLFDIISEMIRGTHEQIRANEREI
MRYAVRRGRMDRNQFRTSFPKQESNPAWLDEQIAKAPAEIKAHLEKVRPDVLAFQQKIAD
IEKELGLNVSEIKDISKRMAIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQ
EGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINRV
SRQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDQ
NITSPIDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTRER
IRQIEAKALRKLRHPSRSEHLRSFLEND
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatgcattcccctacttctcaagtagcggctctgattagccgaggcaaagaa
caaggttacttaacttacgctgaggttaacgatcatctgccggactcgattactgaaagc
gaacagattgaagacatcatccagatgcttcaagacgttggtattcctgtacacgagcgt
gcacctgaatctgacgataccatgttcggcgaatcagctgatgcaactgatgaagttgct
gaagaagaagctgctgccgtacttgcatctgttgaaaatgagcctggacgtacgacagac
cctgtacgtatgtacatgcgtgaaatgggtacagtagaactgttaacccgtgaaggtgaa
atcagcattgctaaacgtattgaagaaggcattcgtgatgtcttgaactcaatcgcttac
tggccaaatgctgttgaagttgtattaaaagaatataatgattttttaactggcgaacgc
cgtcttgccgatatcttatctggttatttagaccctgaaactgacgaagatattcctgaa
gttttagaagatgttgaagagcttgaggaagaagacgaatcatctacaaagtcaacgaaa
gaagttaagcttgatgatgacgatgaagaagaagagtctgaaggtgatgatgattctgaa
ggtgattcaggtccagaccctgaagttgcaaaagttcgttttgctgaattagaagctgca
tgggctcaaactaaagctgtcatcgaaaaacatggccgtaatagccctgaagcaaatgaa
gctcttgagtctttagcaactgtatttatgatgtttaaatttactccacgtttatttgac
atcatttcagaaatgattcgcggaactcatgaacaaattcgtgccaatgaacgtgaaatt
atgcgttatgcagtacgtcgtggccgtatggaccgtaaccagttccgtacatctttcccg
aaacaggaatctaatcctgcttggttagatgaacaaattgctaaagctccagctgaaatc
aaggctcacttggaaaaagtgcgtcctgatgttttagccttccagcaaaaaattgcagat
atcgaaaaagagcttggcctaaacgttagtgaaattaaagatatttctaaacgtatggca
attggtgaagccaaagctcgtcgtgcgaaaaaagaaatggtagaggccaaccttcgtttg
gtaatttcgattgcgaaaaaatataccaaccgtggtttacagttccttgacttgattcaa
gaagggaacattggtttgatgaaagccgtagacaagtttgaataccgtcgtggttataaa
ttctcgacttatgcgacttggtggattcgtcaggcaattacccgttctattgccgatcag
gctcgtacaattcgtattcctgtacacatgattgaaacgattaacaaaattaaccgtgta
tcgcgtcaattattacaggaaatgggccgtgaacctactcctgaagagttaggcgaacgc
ttagaaatggatgaggttaaagttcgtaaggttcttaaaattgcgaaagagccaatttca
atggaaactccaatcggtgatgatgaagattcgcatcttggcgatttcattgaagaccag
aacatcacttctccaattgatgctgcgacttcagaaggcttaaaagaagcaactcgtgaa
gttttagaaaacttaactgaacgtgaagcaaaagtattgaagatgcgttttggtattgat
atgccaaccgatcatactttagaagaagtaggtaagcagtttgatgtaacacgtgagcgt
attcgtcagattgaagcgaaagcattgcgtaaattacgtcacccttctcgttctgaacac
ttgcgttctttcctagagaatgactaa
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