Alcanivorax borkumensis: ABO_1745
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Entry
ABO_1745 CDS
T00380
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
abo
Alcanivorax borkumensis
Pathway
abo03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
abo00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
ABO_1745 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
abo03011
]
ABO_1745 (rpsA)
Ribosome [BR:
abo03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
ABO_1745 (rpsA)
Bacteria
ABO_1745 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
DUF2110
RsgI_N
CsrA
Motif
Other DBs
NCBI-ProteinID:
CAL17193
UniProt:
Q0VNQ5
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All DBs
Position
complement(1986476..1988158)
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AA seq
560 aa
AA seq
DB search
MTESFADLFEESLKDLDVARGSIIKGTVVSIDSDWVTVNAGLKSEGIIAREEFLNEAGEL
EIVEGDEVDVAVDAIDDGMGFTRLSREKAKRAEVWGELEKAFDEDEIVKGMISGKVKGGF
TVDIGPIRAFLPGSLVDIRPVRDVAHLEGKELDFKVIKLDPKRNNVVVSRRAVMEAEHSA
EREQLLESLQEGMEVKGIVKNLTDYGAFVDLGGIDGLLHITDMAWKRIKHPSEIVEVGQE
IDVKVLKFDREKMRVSLGLKQLGEDPWHDIVGKYPEGTRVKAKVTNLTDYGCFAEIEEGV
EGLVHVSEMDWTNKNIHPSKVVEIGDEVEVMILDIDEDRRRISLGIKQCQSNPWDAFEEK
YQKGERISGKIKSITDFGIFIGLEGGIDGLVHLSDISWEEQGEDAVRNFNKGDELETVVL
SIDAERERISLGIKQLTDDPFAQYVAANDKGTIVKGVVKAVDAKAAIVELAENVEATLRA
SEISRDRVNDATEVLKVGDEVEAKITNVDRKNRVLSLSIKSKDQADEREAIEGHQEQQDA
NAPKTIGDLIKKQMESSNES
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatcttttgctgatctctttgaagaaagcctaaaggacctggacgttgcccgt
ggctccattatcaagggtacggttgtatccatcgatagcgactgggtaaccgttaacgca
ggcctgaaatctgaaggcattattgcccgtgaagaattccttaacgaggcaggcgagctg
gaaattgtcgaaggcgatgaagtagatgttgccgtagacgccatcgacgatggtatgggc
ttcacccgtctgtcccgtgaaaaagccaagcgcgccgaagtttggggcgagctggaaaaa
gctttcgacgaagacgagatcgtaaaaggtatgatttccggcaaggtgaagggtggcttc
actgtggacatcggcccgatccgcgctttcttgcccggttcactggttgatattcgtccg
gttcgcgatgttgcgcacctggaaggcaaagagttggacttcaaggtcatcaaactcgat
cctaagcgtaataacgtagtggtttcccgtcgtgccgtgatggaagcagagcacagcgca
gagcgcgagcaactgctggaatccctgcaggaaggcatggaagtcaaaggtatcgtgaag
aacctgaccgactacggtgcgttcgtagatctgggtggtatcgacggcctgctgcacatt
accgacatggcttggaagcgtatcaagcacccgagcgagatcgtggaagtgggtcaggaa
atcgacgttaaggttctcaagtttgatcgcgagaagatgcgtgtttccctgggtctcaag
cagctgggcgaagatccgtggcacgatatcgtgggcaagtacccagaaggcacccgcgtg
aaagccaaggtaaccaacctgaccgattacggctgctttgctgaaattgaagaaggtgtg
gaaggcctggttcacgtttccgaaatggattggaccaacaaaaacattcacccgtccaag
gttgtagagattggcgacgaagtggaagtgatgatcctggacatcgacgaagaccgtcgt
cgtatctccttgggtatcaagcagtgtcagtccaacccgtgggatgccttcgaagagaag
tatcagaaaggcgagcgcattagcggcaaaatcaagtccatcaccgacttcggcatcttc
attggcttggaaggtggcatcgatggcttggtgcacctgtccgacatttcctgggaagag
caaggcgaagacgccgtgcgtaacttcaacaagggcgatgagctggaaaccgtggtactg
tctattgatgcagagcgcgaaagaatttccttgggtatcaagcagttgacagatgatccg
tttgctcagtatgttgctgcaaacgacaagggaactatcgttaagggtgtagtgaaagca
gtagacgcgaaagcggccattgttgagctggctgagaacgttgaagctaccctgcgcgcc
agcgaaatcagccgcgaccgcgttaacgatgcgaccgaggtgcttaaggtcggtgatgag
gtggaagccaagatcaccaacgttgaccgtaagaaccgtgttctcagcttgtccattaag
tccaaggaccaagctgatgagcgtgaagccatcgaaggccatcaggagcagcaagacgcc
aacgctccgaagaccattggtgacttgatcaagaagcaaatggaaagcagcaacgagtca
taa
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