Azospirillum brasilense Az39: ABAZ39_03590
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Entry
ABAZ39_03590 CDS
T03288
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
abq
Azospirillum brasilense Az39
Pathway
abq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
abq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABAZ39_03590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
abq03021
]
ABAZ39_03590
03400 DNA repair and recombination proteins [BR:
abq03400
]
ABAZ39_03590
Enzymes [BR:
abq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABAZ39_03590
Transcription machinery [BR:
abq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABAZ39_03590
DNA repair and recombination proteins [BR:
abq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABAZ39_03590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AIB11113
UniProt:
A0A060DJF3
LinkDB
All DBs
Position
755616..759809
Genome browser
AA seq
1397 aa
AA seq
DB search
MAKSFTGRKRVRKSFGRIPEVTQMPNLIEVQRSSYDHFLQMDVPPEKRANLGLQEVFRSV
FPIKDFSDRAVLDFVKYELEQPKYDVEECQQRGMTFAAPLKVTLRLSVFDVEEDTGLRSI
RDIKEQDVYMGDMPLMTANGTFIINGTERVIVSQMHRSPGVFFDHDKGKTHSSGKYLFAA
RVIPYRGSWLDFEFDAKDLVYVRIDRRRKLPATTLLFALDGADTEALRAERKAQKKDLLP
YEAQGMSKEEILNFFYETITYTRASGGWKTPFNADRMKGVKVASDLVDATSGQVVAEAGT
KMTPRLIKKLVEGGLTEQLVSTEELTGRYLAVDIINERTGEVLFEAGDELSASDLDKLEK
AGVDELPVLAIDHLNVGAYIRNTMAADRNASREDALIDIYRVMRPGEPPTLESAEALFAG
LFFDSERYDLSAVGRVKMNARLNFQTEDSVRVLRKQDIMSILKVLVNLKDGRGEIDDIDH
LGNRRVRSVGELMENQYRVGLLRMERAIRERMSSVEIDTVMPHDLINAKPAAAAVREFFG
SSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGP
NIGLINSLATYARVNQYGFIESPYRKVRDSIVTDEVVYLSAMEEGRYVVAQANAELDANN
RFAADLVSCRQGGEYLMFRPEAIDLIDVSPKQLVSVAAALIPFLENDDANRALMGSNMQR
QAVPLVKADAPLVGTGMEATVARDSGVTIVAKRKGIVDQIDATRIVVRATDSSDATAPGV
DIYNLLKFQRSNQNTCITQRPLVKVGDRVAAGDIIADGPSTELGELALGRNVLVAFMPWN
GYNFEDSILINERIVKDDVFTSIHIEEFEVMARDTKLGQEEITRDIPNVGEEALKNLDEA
GIVYIGAEVRPGDILVGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTI
VEVRVFSRRGVDKDERALAIERAEIEKLAKDRDDERAILERSFYTRLKEVILGQTAQSGP
KGMRAGTVLTDAELANLTKGQWRQISIADEQVMETVESLGKVFDDSIQALQNRFENKVEK
LQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVVSRILPQEDMPYLEDGQPVD
LVLNPLGVPSRMNIGQILETHLGWASAGLGKQIGRAIDQYRLAMKGRGDAAQTMDGLRIT
LKEAYGEKVYDDQIADMTEGELLELGGNLRKGVPFATPVFDGAREEDICQQLEKAGLDRS
GQVTLIDGRTGEAFDRKVTVGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGG
QRFGEMEVWALEAYGAAYTLQEMLTVKSDDVSGRTKVYEAIVRGDDNFEAGIPESFNVLV
KELRSLGLNVELNQRSY
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatcctttacgggtcgaaagcgtgttcggaagagcttcgggcgcatcccggaa
gtcacccagatgcccaacctcatcgaggtgcagcgcagctcctacgaccacttcctgcaa
atggacgtcccgccggagaagcgggccaacctgggtctgcaggaggtgttccggtcggtg
ttcccgatcaaggatttctccgaccgcgccgtcctcgacttcgtgaagtacgagcttgag
cagccgaagtatgacgtcgaggagtgccagcagcgcggcatgaccttcgccgccccgctg
aaggtgaccctgcgcctctccgtcttcgacgtggaagaggacacgggcctgcgctcgatc
cgcgacatcaaggagcaggacgtctacatgggcgacatgcccctgatgacggccaacggc
accttcatcatcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgcagcccgggc
gtcttcttcgaccatgacaagggcaagacccattcgtcgggcaagtatctcttcgccgcc
cgcgtgatcccgtaccgcggctcctggctggacttcgagttcgacgccaaggacctcgtc
tacgtgcgcatcgaccgccgccgcaagctgccggccaccacgctgctgttcgccctggac
ggcgcggacaccgaggcgctgcgcgccgagcggaaggcccagaagaaggatctgctgccc
tacgaggcgcagggcatgtcgaaggaagagatcctcaatttcttctacgagacgatcacc
tacacccgcgcgtcgggcggctggaagacccccttcaatgccgaccgcatgaagggcgtg
aaggtcgcctccgacctcgtggacgcgacctccggccaagtcgtcgccgaggccggcacc
aagatgacgccgcgcctgatcaagaagctggtcgagggcggcctcaccgagcagctcgtc
tccaccgaggagctgaccggccgctatcttgccgtcgacatcatcaacgagcggaccggc
gaagtcctgttcgaagccggtgacgaactgtcggcgagcgacctcgacaagctggagaag
gccggcgtcgacgagctgccggtgctggcgatcgaccacctcaacgtcggcgcctacatc
cgcaacacgatggccgccgaccgcaacgcgtcccgtgaggacgcgctgatcgacatctac
cgcgtcatgcgtccgggcgagccgccgaccctggagtcggccgaggcgctgttcgccggc
ctgttcttcgacagcgagcgctacgacctgtcggcggtgggccgcgtcaagatgaacgcg
cgcctgaacttccagaccgaggacagcgtccgcgtcctgcgcaagcaggacatcatgtcg
atcctcaaggtcctggtgaacctgaaggacggccgaggcgagatcgacgacatcgaccat
ctcggcaaccgccgcgtccgctcggtcggtgagctgatggagaaccagtaccgcgtcggt
ctgctgcgcatggagcgtgcgatccgcgagcgcatgagctcggtcgagatcgacacggtc
atgccgcacgacctgatcaacgccaagccggcggcggcggcggtgcgcgagttcttcggc
tcgtcgcagctctcgcagttcatggaccagaccaacccgctgtccgagatcacgcacaag
cgtcgcctctcggctctcggcccgggcggtctgacccgcgagcgcgccggcttcgaggtg
cgcgacgtgcacccgacgcactacggccgcatctgcccgattgagacgcccgaaggtccg
aacatcggcctgatcaactcgctggcgacctacgcccgcgtgaaccagtacggcttcatc
gagagcccgtaccgcaaggtgcgcgacagcatcgtcacagacgaggtggtctacctctcc
gccatggaggagggccgctacgtcgtcgcccaggccaacgccgagctggacgcgaacaac
cgcttcgccgccgacctcgtgtcgtgccggcagggcggcgaatacctgatgttccgcccg
gaggccatcgatctgatcgacgtgtcgccgaagcagcttgtctccgtcgccgcggcgctg
atcccgttcctcgagaacgacgacgcgaaccgcgcgctgatgggctcgaacatgcagcgt
caggcggtgccgctggtcaaggccgacgcgccgctggtcggcacgggcatggaggccacg
gtcgcccgtgacagcggcgtgaccatcgtcgcgaagcgcaagggcatcgtcgaccagatc
gacgcgacccgcatcgtggtccgggcgaccgactcgtccgacgccacggcgccgggcgtg
gacatctacaacctgctgaagttccagcgttccaaccagaacacctgcatcacccagcgt
ccgctggtgaaggtgggcgaccgcgtggcggccggcgacatcatcgccgacggtccctcg
acggagctgggcgagctggcgctgggccgcaacgtgctcgtcgccttcatgccgtggaac
ggctacaacttcgaggactcgatcctcatcaacgagcgcatcgtcaaggacgacgtcttc
acctcgatccacatcgaggagttcgaggtcatggcccgcgacacgaagctgggccaggag
gaaatcacccgcgacattccgaacgtcggtgaggaagccctcaagaacctcgacgaggcc
ggcatcgtctacatcggcgccgaggtccgtccgggcgacatcctggtcggcaaggtgacg
ccgaagggcgaaagcccgatgacgccggaagagaagctgctgcgcgccatcttcggcgag
aaggcgtccgacgtccgcgacacctcgctgcgcctgccgccgggcgtcgccgggacgatc
gtcgaggtccgcgtgttcagccgccgcggcgtcgacaaggacgagcgcgccctggccatc
gagcgggccgagatcgagaagctggccaaggaccgcgacgacgagcgcgcgatcctggag
cgcagcttctacacccgcctgaaggaggtcatcctcggccagaccgcgcagtccggcccg
aagggcatgcgggccggcacggtgctgaccgacgccgagctggcgaacctgaccaagggc
cagtggcgccagatctccatcgccgacgagcaggtgatggagacggtggagagcctgggc
aaggtcttcgacgactcgatccaggcgctgcagaaccgcttcgagaacaaggtcgagaag
ctgcagcgcggcgacgagctgccgccgggcgtgatgaagatggtcaaggtcttcgtcgcg
gtgaagcgcaagctgcagccgggcgacaagatggccggccgccacggcaacaagggtgtg
gtctcccgcatcctgccgcaggaggacatgccgtacctggaggacggccagccggtcgat
ctggtgctgaacccgctgggcgtgccgtcgcgcatgaacatcggtcagattctggagaca
cacctgggctgggcgtcggccggcctcggcaagcagatcggccgcgccatcgaccagtac
cgcctcgccatgaagggccgcggcgacgccgcccagaccatggacgggctgcgcatcacg
ctgaaggaggcctacggcgagaaggtctacgacgaccagatcgccgacatgaccgaaggc
gagctgctggaactgggcggcaacctgcgcaagggcgttcccttcgccacgccggtcttc
gacggcgcgcgcgaggaggacatctgccagcagctggagaaggcgggtctggaccgttcc
ggtcaagtcaccctgatcgacgggcgcactggcgaggccttcgaccgtaaggtgaccgtc
ggctacatctacatgctgaagctgcaccacctcgtggacgacaagatccacgcgcgctcg
atcggtccctactcgctggtcacccagcagccgctcggcggtaaggcccagttcggcgga
cagcgcttcggtgagatggaagtgtgggccctcgaagcctacggcgccgcctacacgctg
caggaaatgctcacggtcaagtctgacgacgtgtccggccgcaccaaggtctacgaggcg
atcgtccgcggcgacgacaacttcgaggcgggcatccctgagtccttcaacgttctggtc
aaggagctgcgctccctgggcctgaacgtcgagctgaaccagcggtcgtactga
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