Aliarcobacter butzleri ED-1: ABED_0577
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Entry
ABED_0577 CDS
T01823
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
abt
Aliarcobacter butzleri ED-1
Pathway
abt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
abt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABED_0577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abt03400
]
ABED_0577
DNA repair and recombination proteins [BR:
abt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABED_0577
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABED_0577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
SRP54
Viral_helicase1
AAA_22
DUF87
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
BAK70294
LinkDB
All DBs
Position
598149..600122
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AA seq
657 aa
AA seq
DB search
MAKFKVVSDYEPSGDQPKAIEALSSSIKAGNQYNTLLGVTGSGKTYTIAKVIEKVQKPTL
IMTHNKTLAAQLYSEFKQFFPNNHVEYFISYYDYYQPEAYIPRSDLFIEKDSSINDELER
LRLSATASLLSFDDVIVIASVSANYGLGNPSEYKAMVQRVEVGFNYSQKEFLLKLIEMGY
KRNDKFFDRADFRVNGDVIDIFPAYFEDEFIRVEFFGDEVESIAKHEYITNTKTKDLNEV
IIYSVNPFVVTQENLGRAVKEIEEELEQRLDFFQKEQKLVEYQRLKQRVEFDLEMIEGTG
MCKGIENYARHLTGQKAGETPYSLLDYFEQMDEDFLLVVDESHVSLPQFRGMHAADRSRK
EVLVEYGFRLPSALDNRPLKFDEFINKAPHYVFVSATPNELELEMSSVVAEQIIRPTGLL
DPIIDIIDSEFQVEKLHDEIKKVIAKNERVLVTVLTKKMAEELASYYADLGIKVKYMHSE
IDAIERNQIIRELRLGTFDVLIGINLLREGLDIPETSLVAILDADKEGFLRSRTSLIQTI
GRAARNENGRVILFAKKITASMQFAIDETNRRRKLQEEFNKEHNITPKSTKRKLDENLKL
EEYDDVAWKKQKLEKMPASERKKILIELNKQMKKAASDLNFEEAIRLRDEIAKIKDI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaatttaaagtagtaagtgattatgaaccaagtggagatcaaccaaaagctata
gaagcattaagtagctcaataaaggctggtaatcaatacaacacacttttaggagtaact
ggaagtggtaaaacttatactattgcaaaagttatagaaaaagttcaaaagccaactttg
attatgacacataataaaactttggctgctcagttatactcagagtttaaacaatttttc
ccaaataatcatgttgaatattttatatcttactacgattattatcaaccagaagcttat
attccaagaagtgatttgtttatagaaaaagatagttcaataaatgatgaacttgaaaga
ctaagacttagtgcaactgcttcacttttatcatttgatgatgttattgtaattgcttcg
gtatcagcaaactatggtttgggaaatccaagtgaatataaagcgatggttcaaagagtt
gaagttggatttaattattctcaaaaagagtttttattaaaactaatagaaatgggatat
aaaagaaatgataaattttttgatagagcagattttagagtaaatggagatgtaatagat
attttccctgcttattttgaagatgaatttataagggttgaattttttggtgatgaggtt
gaatctattgcaaaacacgaatatataacaaatacaaaaacaaaagatttaaatgaagta
attatttattcagtaaatcctttcgttgtaacacaagaaaatcttggtcgtgctgtaaaa
gaaatcgaagaagagttagagcaaagacttgattttttccaaaaagagcaaaaacttgtt
gagtatcaaagacttaaacaaagagttgagtttgacttagagatgattgagggaactgga
atgtgcaaaggaatagaaaactatgcacgacatttaacaggtcaaaaagctggagaaact
ccatactctcttttagattattttgaacaaatggatgaagattttttacttgttgttgat
gaatcacatgtatctttaccacaatttcgtggaatgcatgcagctgatagaagtcgaaaa
gaagttttagttgaatatggatttagactcccaagcgcacttgataatagaccacttaaa
tttgatgaatttatcaacaaagcaccacattatgtatttgtaagtgcaactccaaatgaa
cttgaacttgaaatgagttcagttgttgctgaacaaattataagaccaacaggattactt
gacccaattatcgacataatagatagtgaatttcaagttgaaaaactacatgatgagata
aaaaaagtaatagcaaaaaatgaaagagttttagttacagttttaactaaaaaaatggca
gaagaacttgcctcttattatgctgatttaggaataaaagtaaaatatatgcactctgaa
attgatgcaattgaaagaaatcaaataataagagagttaagacttggaacttttgatgtt
ttaattggaatcaaccttttaagagaaggtttggatattccagaaacttcacttgttgca
attctagatgcagataaagaaggatttctaagaagtagaacttcacttattcaaactatt
ggaagagctgctagaaatgaaaatggaagagttattttatttgcaaaaaaaattacagcc
tcaatgcaatttgcaattgatgaaacaaatagaagaagaaaacttcaagaagagtttaat
aaagagcacaatattactccaaaatctacaaaaagaaaacttgatgaaaatctaaaactt
gaagaatacgatgatgttgcttggaaaaaacaaaaactagaaaaaatgccagcaagtgag
cgtaaaaaaatcttaattgaattaaataaacagatgaaaaaagctgcaagtgatttgaac
tttgaagaagcaatacgattaagagatgaaatcgcaaaaataaaagatatctaa
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