Aliarcobacter butzleri RM4018: Abu_1479
Help
Entry
Abu_1479 CDS
T00600
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
3.6.4.13
]
Organism
abu
Aliarcobacter butzleri RM4018
Pathway
abu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
abu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Abu_1479 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
abu03019
]
Abu_1479 (rhlE)
Messenger RNA biogenesis [BR:
abu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Abu_1479 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ABV67734
UniProt:
A8EUW0
LinkDB
All DBs
Position
complement(1486769..1488076)
Genome browser
AA seq
435 aa
AA seq
DB search
MSFSNLGLCKEILRAIKEEGYTTPTPIQSKSIPVILSKKDVLAAAQTGTGKTAGFTLPLL
QRLKDSNFKDKKTQVRALILTPTRELAAQVAQSVETYGKYLPFKSAVIFGGVGINPQKAL
LKKGVDIIIATPGRLLDLISQDSLDLSKIEFLVLDEADRMLDMGFINDIKKILAILPKQR
QNLLFSATFSNEIKKLADGLLKSPVLVEVSKANSASFKVEQVVHHVDKDRKKELLLHLVN
KNSWQQVLVFTRTKHGANKLSEALVKDKITSAAIHGNKSQGARTKALDDFKNGKVRVLVA
TDIAARGIDIEQLPHVVNFELPNVAEDYVHRIGRTGRAGNNGIAISLVCVDEHEYLFGIE
KLIKQKIKKVEINGFKVNPNIKAEPIGNRSNRGNKANNSNQNRKVKPKDENSSSSTKSKR
FASRNRRTNTSSKNI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttcaaacttaggtttatgtaaagaaattcttcgtgcaattaaagaagagggt
tatacaacaccaactccaatccaatcaaaatcaattccagtgattttatcaaaaaaagat
gttttagcagctgctcaaacaggaactggaaaaacagctggatttacacttccactttta
caaagattaaaagatagtaattttaaagataaaaaaactcaagttagagctttgattctt
actccaacaagagaacttgcagctcaagttgcacaaagtgttgaaacttatgggaaatat
cttccttttaaatcagcagttatttttggaggagttggaataaatccacaaaaagctctt
ttaaaaaaaggtgttgacatcatcatcgcaactcctggaagattgcttgatttaatctct
caagatagtcttgatttatcaaaaatagagtttttagtgttggatgaggcagatagaatg
cttgatatgggatttataaatgatattaaaaagattttagcaattttgccaaaacaaaga
caaaatctacttttttcagcaactttttcaaatgaaataaaaaagttggctgatggctta
ctaaaatcacctgttttagtagaagtttcaaaagcaaatagtgcttctttcaaagttgag
caggttgttcatcatgttgataaagatagaaagaaagagcttttattacatttagtaaat
aaaaatagttggcaacaagttttggttttcacaagaacaaaacatggagcaaataaacta
agcgaagcacttgtaaaagataaaattacatcagcagcaattcatggaaataaatcgcaa
ggcgcaagaacaaaagcattagatgattttaaaaatggaaaagtaagagttttagttgca
actgatattgcagcgcgtggaattgatattgaacaacttcctcatgttgtaaattttgaa
ttaccaaatgttgcagaagattatgttcatagaataggaagaactggacgagcaggaaat
aatggtattgctatatctttagtttgtgtagatgaacatgagtatttatttggaattgaa
aagttaattaaacaaaaaatcaaaaaagtagagataaatggatttaaagtaaatccaaat
atcaaagcagaacctattggaaatagaagtaatagaggaaataaagctaataattcaaat
caaaatagaaaagtaaaaccaaaagatgaaaattcatcttcaagcacgaaatcaaaaagg
tttgcttcaagaaatagaagaacaaatacaagttctaaaaatatttaa
DBGET
integrated database retrieval system
