Acidothermus cellulolyticus: Acel_0300
Help
Entry
Acel_0300 CDS
T00426
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ace
Acidothermus cellulolyticus
Pathway
ace03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ace00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Acel_0300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ace03021
]
Acel_0300
03400 DNA repair and recombination proteins [BR:
ace03400
]
Acel_0300
Enzymes [BR:
ace01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Acel_0300
Transcription machinery [BR:
ace03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Acel_0300
DNA repair and recombination proteins [BR:
ace03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Acel_0300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
TarH
Motif
Other DBs
NCBI-ProteinID:
ABK52074
UniProt:
A0LRL4
LinkDB
All DBs
Position
321100..325014
Genome browser
AA seq
1304 aa
AA seq
DB search
MLDVNYFDELRIGLATADDIRQWSHGEVKKPETINYRTLRPEKDGLFCERIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDEEARHRDLPSLEAQISVEKQEIEKRMNVELEERARKLEED
LAALEAEGAKADAKRKVREAAEREMRQIRERAQKEIDRIDEVFTRFKNLKVQDLEGDEVL
YRELRDRFGQYFRGGMGAQAIKERLESFNLEAEAEALREQIRNGRGQKKARALKRLKVIS
AFLNTRNSPMGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKVMALELFKPFVMKRLVDLNHAQNIKSAERMVERAT
SGLSRYAMVWDVLEEVIKEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCAAFNA
DFDGDQMAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPSQDMVFGIYYLTTIKPG
ATGEGRVFSSDAEAIMARDLGELDIQAKIKVRLKDVVAVDDGTGSWTPPDGWQPGDPLLV
ETTLGRILFNEALPPDYRFINYELTKKDLSTIVNDLAERYPKVMVAACLDEMKTLGFHWA
TRAGVTISISDVVMPPRKQEILEAYEAKAEKVQRQYERGLITDDERRQELIEIWTQATAD
VAREMEANFPKDNPVFMMVNSGARGNMMQVRQIAGMRGLVANPKGEIIPRPIKSNFREGL
SVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTERAISMRIGVK
GPDGTLTRLPTVETSVYARTLAEDVIVDGKVLAAKGSDIGDLTITELLAHGVEQVRVRSV
LTCESKLGVCAACYGRSLASGKLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDI
THGLPRVVELFEARTPKGVAPISEVTGRVKIEETEKARKIIITPDDGSEEVSYQVSKRAR
LRVAEGEHVEVGTQLVEGTVNPHEVLRILGPRAVQVHLVQEVQEVYRSQGVPIHDKHIEI
IVRQMLKRVNILESGDTEFLPGELVERPKFEEENRRVVAEGGTPATARPVLMGITKASLA
TESWLSAASFQETTRVLTDAAINAKSDPLLGLKENVIIGKLIPAGTGMPRYRNIRVEPTE
EARAAVYSMSGYDTGSYASGYGQFGTGSGQAVPLDDYDYGSYDR
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaattacttcgacgagctgcgtatcggtctggccacggctgacgacatc
cgccagtggtcgcacggcgaagtcaagaagcccgagaccatcaactaccggacgctgcgc
ccggagaaggatggcctgttctgcgagcgcatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcggttcaagggaatcatctgcgagcgctgcggcgtc
gaggtcacccgctcgaaggtccggcgggaacggatgggccacatcgagctggccgcgccg
gtcactcacatctggtacttcaagggagtcccgagccggctcggctacctgctcgacctt
gcacccaaggacctggagaaggtcatctacttcgccgcatacatgatcacttgggtggat
gaggaggccaggcaccgcgatctgcccagcctcgaggcgcagatctccgtcgagaagcaa
gagatcgaaaagcgcatgaacgtcgagctggaggagcgggcccgcaagctcgaagaggac
ctcgcggcgctggaggccgagggtgccaaggcggacgccaagcgcaaggtgcgggaagcc
gccgaacgggagatgcggcagatccgggagcgcgcgcagaaagagatcgaccgcatcgac
gaagtcttcacccggttcaagaacctcaaggtgcaagacctcgaaggcgacgaggtgctg
taccgggaactgcgggaccgcttcgggcagtacttccgcggcggcatgggcgcccaggcg
atcaaggagaggctggagtcgttcaacctcgaagcggaggctgaggcgcttcgcgagcag
atccgcaacggtcgcgggcagaagaaggcacgggcgctcaagcggctcaaggtgatttcg
gcgttcctcaacacccggaactcgccgatgggcatggttctcgactgcatcccggtgatc
ccgccggacctccggccgatggtccagctggacggcgggcggttcgcgacgtccgacctg
aatgacctctaccggcgggtcatcaaccggaacaaccggttgaagcgcctcctcgacctc
ggcgcgccggagatcatcgtcaacaatgagaagcggatgctgcaggaggcggtcgacgcc
ctcttcgacaacggccgccgcggccggccggtcaccggcccgggcaaccggccgttgaag
tcgctctccgacatgctcaagggcaagcagggacggttccgccagaacctgctgggcaag
cgggtcgactactccggccgttcggtcatcgttgtgggtccccagctcaagctccaccag
tgcgggctgcccaaggtgatggcgctcgaactgttcaagccgttcgtcatgaagcggctc
gttgacctcaatcacgctcagaacatcaagagcgccgagcggatggtcgagcgggcgacc
agcggactgtcccggtacgccatggtctgggacgtcctcgaagaggtgatcaaggagcac
ccggtgctgctcaaccgagccccgaccctgcaccggctcggcatccaggcgttcgaaccg
cagctcgtcgagggcaaggcgatccaaatccacccgctcgtctgcgccgcgttcaacgcc
gacttcgacggcgaccagatggccgtgcacttgccgctctccgccgaggcccaagcggaa
gcgcgcatcctcatgctgtcgtcgaacaacatcctcaagccggccgacggccgtccggtg
acgatgcccagccaggacatggtcttcggcatctactacctcacgaccatcaagcccggc
gcgaccggcgagggacgggtcttctcctcggacgccgaggccatcatggcccgcgacctt
ggcgagctcgacattcaagccaagatcaaggtgcggttgaaggacgtcgtcgccgtggac
gacggcaccggctcctggacgccgccggacggttggcaaccgggtgatccgctgctggtg
gagaccaccctgggacgcatcctcttcaacgaggcgttgccgccggactaccggttcatc
aactacgaactgacgaagaaggacctctcgacgatcgtcaatgacctcgccgagcggtac
ccgaaggtgatggtggccgcctgcctggacgagatgaagacactcggtttccactgggcg
accagggccggcgtgacgatctccatctcggacgtcgtcatgccgccgcgcaagcaggaa
atcctcgaagcctacgaggccaaggccgagaaggtccagcgccagtacgaacgcggtctg
atcaccgacgacgagcggcggcaagagctcatcgagatctggacgcaggccaccgccgac
gtggcacgcgagatggaagcgaacttcccgaaggacaaccccgtcttcatgatggtcaac
tccggggcgcgcggaaacatgatgcaggtccggcagattgccggcatgcgtggtctggtc
gccaaccccaagggcgagatcatccctcggccgatcaagtcgaacttccgggagggcctg
agcgttctggagtacttcatctccacgcacggggcgcggaagggtctcgccgacaccgcg
ttgcggacggccgactccggttacctgacccggcggctggtcgacgtctcgcaggacgtc
atcgtccgggaggaagactgcggcaccgagcgcgccatctcgatgcggatcggtgtcaaa
ggcccggacggcacgctgacccggctgcccacggttgagacgagcgtgtacgcccggacc
ctcgccgaggacgtgattgtcgacggcaaggtgcttgccgccaaggggtcggacatcggc
gatctcacgatcacggaactcctcgcccacggcgtcgaacaggttcgggtgcggagcgtg
ctgacctgcgagtccaagctcggggtctgcgcggcgtgctacggtcggtcgcttgcgagc
ggcaagctcgtcgacgtcggcgaggccgttgggatcatcgctgcgcagtcgattggcgag
ccgggaacccagctgaccatgcggaccttccacaccggtggggttgccggtgaggacatc
acgcacggtctcccgcgggtggtcgagctgttcgaggcccgtacgccgaagggtgtcgcg
ccgatcagcgaagtgaccggtcgtgtgaagatcgaagaaaccgagaaggctcggaagatc
atcattaccccggacgacggctcggaggaggtctcctaccaggtctccaagcgggcccgg
ttgcgggttgcggaaggtgagcacgtcgaagtcggcacccagctggtcgaaggcacggtg
aacccgcatgaggtgctgcggattctcggcccccgggcggtccaggtgcacctcgttcag
gaggtccaggaggtgtaccgctcgcagggtgtgccgatccacgacaagcacatcgagatc
atcgtgcggcagatgctcaagcgggtgaacatcctcgaatccggcgacaccgagtttctg
cccggagagctcgtcgagcggccgaaattcgaggaggagaaccgccgcgtggtcgccgaa
ggcggcacgccggcaaccgctcgacccgtcctcatggggatcacgaaggcgtcgctggcc
accgaatcgtggctctcggcggcgtccttccaggagacgacgcgggtgctcaccgatgcg
gcgatcaacgccaagtcggacccgctcctcggcctcaaggagaacgtgatcatcgggaag
ctgatcccggccggcaccggcatgccgcggtatcggaacatccgggtcgagccgaccgag
gaagcgcgtgccgcggtctactccatgagcgggtacgacaccggcagttacgcctctggg
tacgggcaattcggcaccggctcgggtcaggccgttccgctcgacgattacgactacggc
agttacgatcgctga
DBGET
integrated database retrieval system