Acidothermus cellulolyticus: Acel_1109
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Entry
Acel_1109 CDS
T00426
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ace
Acidothermus cellulolyticus
Pathway
ace03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ace00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Acel_1109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ace03400
]
Acel_1109
DNA repair and recombination proteins [BR:
ace03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Acel_1109
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Acel_1109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_16
SMC_N
AAA_21
AAA_29
nSTAND1
RsgA_GTPase
APS_kinase
AAA_23
AAA_33
AAA_22
DnaJ_CXXCXGXG
nSTAND3
NACHT
AAA_18
DUF4350
T2SSE
Viral_helicase1
cobW
SLFN-g3_helicase
FtsK_SpoIIIE
NTPase_1
Ncstrn_small
DUF2116
Motif
Other DBs
NCBI-ProteinID:
ABK52881
UniProt:
A0LTX1
LinkDB
All DBs
Position
1228829..1231672
Genome browser
AA seq
947 aa
AA seq
DB search
MADRLVIRGAREHNLKDVSLDLPRNALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLYARIGHPH
CPVCGRAISRQTPQQIVDRILEFPAGTRFQVLAPVVRGRKGEYAEMFAELQSKGFVRVRV
DGVVHPLDNPPRLKKQEKHTIDVVVDRLAVKENVAHRLVDSIETALRLSGGLVTLEFVDL
PESDPHRERMFSEHLACPDDDLDFEELEPRSFSFNSPYGACPECTGLGTRLVADPDLIVP
DPSKSIADGAIAPWATGHVSDYFVRLLEALADAAGFSTQTRWDRLPAKARKYILYGYPEP
LYVQYRNRYGRHRSYHTTYEGVVPYIERRHGEVDSDYSRERFESYMREVPCPKCQGKRLK
PLALAVTVGGKSIADVSAMPISECARFLRALDLTARERQIAERVLKEVNTRLGFLLDVGL
DYLTLDRPAATLAGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLLRLR
DLGNTLIVVEHDEDTIRAADWVVDIGPGAGEHGGQIVVSGPVPELLACKESLTGAYLSGR
RTIEVPAIRRPADPKRRLIVKGAREHNLRNIDVAFPLGCFVVVTGVSGSGKSTLVNDILY
AALAKELNGAKTVPGRHDRILGLDLVDKAIHVDQSPIGRTPRSNPATYTGVFDDIRRLFA
ETTEAKVRGYTPGRFSFNVKGGRCEACAGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKTIADVLDMPIEEAADFFGPLPGIARRLTTLVEVGLGYVRLGQPAPTLSGGEAQ
RVKLASELQKRATGRTVYILDEPTTGLHFEDVRKLLAVLQSLVERGNTVIVIEHNLDVIK
TADWVIDLGPEGGAAGGQVVAEGPPEQVAATEGSYTGAFLRKVLRLS
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcggcttgtcatccggggcgctcgcgagcacaacctcaaggacgtctctctc
gatctcccgcggaacgcattgatcgtcttcaccggcctctccggatcgggaaaatcaagc
ctcgcatttgacacgatcttcgcggagggccagcggcggtacgtggagtccctctcggcg
tacgcccggcaatttctcggtcagatggacaagccggacgttgatttcatcgaggggctc
tcgccggcggtgtccatcgaccaaaaatcgacgtcgcgaaatccgcgctccacggtgggt
acgatcaccgaggtttacgactacctgcgtctgctgtacgcgcggatcgggcatccgcac
tgcccggtctgcggacgggcgatttcccgccagacgccgcagcagatcgtcgaccgcatc
ctggaatttcccgccggtacgcgattccaggtgcttgcgccggtcgtccgcggccgcaaa
ggcgagtacgccgagatgttcgccgagctgcagagcaaaggtttcgtgcgggtacgggtc
gacggcgtcgtccacccgctggacaatccgcctcggttgaaaaagcaggagaagcacacc
atcgacgtcgtggtcgaccggcttgccgtcaaggagaacgtcgcccatcggctcgttgac
tcgattgagacggcgctgcggctctccggaggtctggtcacgctcgaattcgtcgatctg
ccggagagcgacccgcaccgggagcgaatgttctccgaacatctcgcctgtcccgacgac
gacctggattttgaagaattggagccgcgttctttctccttcaattcgccgtacggcgcc
tgtccggaatgcaccggcctcggcacccggctcgtcgccgatcccgatctcatcgttccg
gatccgagcaaatccatcgcggacggcgccatcgcgccgtgggcgaccgggcacgtgtcg
gactactttgtccgcctcctcgaggcattggccgacgcggcgggattctccacccagacc
cgctgggaccggctgcccgccaaagcccgcaagtacatcctgtacgggtaccccgaaccg
ttgtacgtccaataccgcaatcggtacggccggcaccggtcataccacacgacctacgaa
ggtgtcgtgccgtacatcgaacgccggcacggcgaagtcgacagcgactacagccgggag
cggttcgagagctacatgcgggaagtgccgtgcccgaagtgccagggcaaacggctcaag
ccgctcgcgctcgccgtgacggtcggcgggaagtccatcgccgacgtgtccgccatgccc
atcagcgaatgtgcgcgattcctgcgcgcccttgacctaaccgcacgggaacggcagatc
gccgagcgcgtgctcaaagaagtgaacacccgcctgggtttcctgctggacgtcggtctc
gactacctcacgcttgaccgtcccgccgctacgttggcgggtggcgaggcgcaacgcatt
cggctggccacccagatcggctccggtcttgtcggcgttctctatgtgctggacgagccg
agtatcggcctgcaccagcgcgacaaccaccgtctcatcgagaccctgctccgcctccgc
gatctcggcaatacgctgatcgtggtcgagcacgatgaggacaccatccgcgcggcggat
tgggtggtcgacatcggtcccggcgccggtgagcacggtggacagatcgtcgtctccggg
ccggtgcctgaactgctggcgtgcaaagagtcgctcaccggcgcgtacctttccggacgg
cgaaccatcgaggtaccggcgatccggcggcccgccgatcccaagcgccggctgatcgtc
aagggtgcccgagagcacaacctccgcaacatcgacgtcgcgtttccgctgggctgcttc
gtcgtcgtgaccggcgtctcgggctcgggaaaatcaacgctggtcaacgacattctctat
gccgcgttggccaaggaactgaacggggcgaaaaccgtgcccggccggcacgaccgcatc
ctcggtctcgacctcgtcgacaaggcgattcacgtcgaccagagcccgatcggccggacg
ccgcggtcgaaccccgcgacctacaccggtgtgtttgatgacatccgccggctcttcgcg
gagaccacggaagccaaggtgcgcggatacactcccgggcgtttctccttcaacgtgaag
ggcggccgctgcgaagcgtgcgccggcgacggcaccatcaaaatcgaaatgaatttcctg
cccgacgtttacgtgccgtgcgaagtgtgccatggcgcgcggtacaaccgggagaccctc
gaggtgcattacaagggcaagacaattgccgacgtcctggacatgccgatcgaagaagca
gccgacttcttcggcccgctgccgggcatcgcccgccggctcaccactctcgtcgaggtc
ggtctgggttatgtccgactcggccaaccggccccgaccctctccggcggggaagcgcag
cgggtgaaactcgcgtccgagctgcagaagcgggcgaccggtcgcaccgtgtacatcctc
gacgagccgacgaccggcctgcatttcgaagacgtccgcaagctgcttgccgttctgcaa
tcccttgtcgagcgcggcaataccgtgatcgtcattgagcataatcttgacgtcatcaag
acggccgactgggtgatcgacctcggtcccgagggcggcgccgccggcggacaggtggtc
gccgagggtccacccgaacaggtggcggcgacggaaggcagctacaccggcgcctttctg
cgcaaggtgctccgcctctcctaa
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