Acidovorax carolinensis P4: CBP36_21240
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Entry
CBP36_21240 CDS
T04962
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acip
Acidovorax carolinensis P4
Brite
KEGG Orthology (KO) [BR:
acip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acip03032
]
CBP36_21240
03400 DNA repair and recombination proteins [BR:
acip03400
]
CBP36_21240
Enzymes [BR:
acip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CBP36_21240
DNA replication proteins [BR:
acip03032
]
Prokaryotic type
DNA Topoisomerases
CBP36_21240
DNA repair and recombination proteins [BR:
acip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CBP36_21240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ART61494
UniProt:
A0A240UJ14
LinkDB
All DBs
Position
pACP4.3:complement(48044..49813)
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AA seq
589 aa
AA seq
DB search
MKIPGHHTPALLIVESPNKTGKIEEMFPGRFKALATYGHICDLPRNPTEGIGINRDAMQG
EYELTSDSKRSIDGTRAVARLKKYLRDHPGTEVYLGTDEDREGESIAAFVMKYLSLQNPK
RMRFNAITREKIEHAFQHADHIDWHAVASREARRLIDRVIGYVASPVLMHQIRQKGVAAG
RVQTAVEALVIERERKIRNHKATPYYTVHMDLGGWKAEWQYQTSAQSRQGPKPNSEYDID
NAIEHCLDVNLAQSVSSIRALVVQSCEEKTEQHLPPSPFYTFSLVQAANRIFGWDAEKTM
QIAQKLFEGDGSGHGHITYHRTDSPNIDPGAAEEIRALLRNQGQSIPAAPNRWALKNKNA
QEGHEAIRPSYIEVEEAGANEEQRALYKLIRERALYSQLSPAVYAIKRITLSDARGLHRF
AATARAIIDPGWLASPAAKSPVVQDQDDPMESGVIHLPNLSKGALINVHRGEVNNHITKA
SPRYTLNTLTAKLEKLGIGRPATLATILKGVQKKGTIITRKDGKLEATPLAEKCYDILYP
RFGFAHIGYTAELESALDQIAKGQLDGEMLVRHVWDRLDIDCAAASSTN
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcccggccaccatacccctgccctacttatagtcgagtctcctaacaagaca
ggtaagattgaagaaatgttccccggccggttcaaggcgcttgctacctatggacacatc
tgtgacctgccaagaaatccgactgaaggaatcggcatcaatcgggacgccatgcaaggc
gagtacgaactcacttcagactccaaacgatccattgatggaactcgggccgttgcaaga
ctcaaaaaatacctgcgggatcatcctggcacagaggtgtacctgggaaccgatgaggat
cgcgaaggagaatctattgccgccttcgtaatgaagtatctgagtcttcagaatccaaag
cgcatgcgtttcaatgcaattacgcgggaaaaaattgaacatgcattccagcatgccgac
catattgattggcatgcggttgcttcacgagaggctcgccgacttattgaccgagttatt
gggtatgtcgcatcacctgtcttgatgcatcagatccggcaaaaaggcgtggctgctggc
cgtgtgcaaactgcagtagaagcacttgtgattgaacgtgaacgcaagatacgaaaccac
aaagcaacgccatactatacggtccatatggatctcggcggctggaaggctgaatggcaa
taccaaacgtcggcgcaatcgcggcaagggccaaagccaaactcagagtacgacattgac
aatgcgatagaacattgcctggatgtcaacttggcacaatcagtttccagcatccgtgca
ctcgttgttcaatcgtgtgaagagaaaacagagcaacaccttccaccatcacctttttat
acattcagcctggttcaggcagcgaatcgtatcttcggatgggatgcagaaaagaccatg
cagattgctcagaagctatttgaaggcgatggatctggacatggacatatcacctatcac
cgcacggacagcccaaatattgaccccggagcagccgaagaaatacgcgccctactccga
aaccaagggcaaagtatcccggccgcgccaaaccgttgggcactcaagaacaagaacgcg
caggaggggcatgaagctattcgcccctcatacatcgaggttgaagaagccggcgccaat
gaagaacagcgcgcactttataaactcatccgcgagcgtgccctctacagccaattgtct
cctgctgtgtacgccatcaaacgaatcacattgtcggatgctcgtgggctccatcggttc
gccgccacagcacgagcaatcatagatccagggtggcttgcaagtccagcagccaaatct
cccgtggtccaggaccaggacgatccgatggaaagtggtgtgattcatctccccaacctt
tccaagggtgccctgataaatgttcaccgaggcgaagttaataaccacataaccaaggca
tcgccacgatataccttgaacacgctaacagccaagctggagaaacttggtattggccgc
cctgccacgctcgcgacaattctgaaaggcgttcaaaaaaagggaaccatcattacccgc
aaggatggcaagcttgaagcaacgccgctggcagagaaatgctatgacatcctttacccc
cgctttggattcgcccatatcggctatacagcggagttggagtcagccctggatcagatc
gccaagggccaactagatggggaaatgctggtgcgtcatgtctgggatcgtcttgacatt
gactgcgctgctgcgagcagtaccaactga
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