Acholeplasma laidlawii: ACL_0339
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Entry
ACL_0339 CDS
T00659
Symbol
topA
Name
(GenBank) DNA topoisomerase IA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acl
Acholeplasma laidlawii
Brite
KEGG Orthology (KO) [BR:
acl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acl03032
]
ACL_0339 (topA)
03400 DNA repair and recombination proteins [BR:
acl03400
]
ACL_0339 (topA)
Enzymes [BR:
acl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACL_0339 (topA)
DNA replication proteins [BR:
acl03032
]
Prokaryotic type
DNA Topoisomerases
ACL_0339 (topA)
DNA repair and recombination proteins [BR:
acl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACL_0339 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
zf-C4_Topoisom
Toprim_4
SBBP
ADK_lid
DUF4489
Motif
Other DBs
NCBI-ProteinID:
ABX80961
UniProt:
A9NF31
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All DBs
Position
351025..352812
Genome browser
AA seq
595 aa
AA seq
DB search
MSDKVIIVESPAKSKTISSYFNDEVTVLSSVGHIRDLATSGKGGLGVDVDNNFEPTYKII
TGKGKLITDLKKKTKGKEVLIATDPDREGEAIAWHIADELGLDLNEHNRIVFKEITKPAV
MEAINHKRQIDLGLVNSQESRRILDRIIGFKLSAFLRDKIKSRSAGRVQSVALKLIVDLE
REIEKFVPETYFTMHAHFNDHVADYVIPKDTRIGLEEATKIVETSTNPFLVSDITQKETK
RNAKPPYMTSTLLQDGVNSLYMSSSRVMSVASELYQGIEINGQIIGLITYMKTDSNRLSK
EFVNPAKAFIETNYGKEYVGFYKTNNKDSSQDAHEAIRPTDIHLTPEKIEQYLSKDQFKL
YKRIYERAVGSLMAPAVFNNTKITLDSNGNIYTMDGSIQVFDGHLKVTGDKSKDKFLPEY
KIGDKLNADLVEKIEKQTQPPARFNEASLIKALEANGIGRPSTYASIIKTIKARDYVIVD
EKRFIPTEQGKLTVDTLNQYFNKIMKIDYTSNMESELDLIADGKVDHIQLLKDFYNKFMP
ILEAAQQNMEKIKPVVTDKICPLCGGNLVIRKSRYGEFYGCSNFPKCKHIEQMSE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaagtaattattgtagaatcacctgcaaaatcaaaaactatctcaagttat
ttcaacgatgaagtaactgttttatcatcggtaggtcatattagagacctagcaacctct
ggtaagggtggtttaggtgtagatgtagataacaattttgaacctacctataaaatcatt
actggtaaaggtaaactgattactgatttaaagaaaaaaacaaaaggtaaagaagtttta
attgcaaccgacccggaccgcgaaggagaagctatcgcttggcatatcgctgatgagtta
ggtctagatttaaacgaacataaccgtattgtttttaaagaaatcacaaaacctgcagtt
atggaagcaatcaaccataaacgtcaaatcgatttaggattagtcaactctcaagaaagt
agacgtattttagacagaatcattggttttaaactatctgcatttttaagagacaaaatt
aaatccagatcagctggtcgtgttcaaagtgtggctttaaaactaattgtggacttagaa
cgtgaaattgaaaaatttgtgcctgaaacatatttcaccatgcatgcacattttaatgac
catgtagcagattatgttattccaaaagatacacgtattggattagaagaagctactaaa
attgttgaaacatcaacaaatccatttttagtaagtgatattactcaaaaagaaacaaaa
agaaacgctaaaccaccttacatgacatctaccttacttcaagatggcgtaaacagtcta
tatatgagctctagccgtgtgatgtcagttgcatctgaactttatcaaggtattgaaatc
aatggtcaaattatcggtttaatcacgtatatgaaaacagactctaatcgtttatctaaa
gagtttgtaaatcctgcaaaagcattcattgaaacaaactatggaaaagaatatgttggt
ttttataagacaaataataaagactctagtcaggatgcccacgaagcaatcagacctaca
gatattcatttaacaccagaaaaaatagagcaatacttatcaaaagaccaatttaaactt
tataagagaatttatgaacgtgcagtaggatcacttatggcacctgcagtatttaacaat
actaaaattacgctagattcaaatggcaatatttatacaatggatggaagtattcaagta
tttgatggtcacttaaaagtaacaggtgataaatcaaaagataaattcttacctgaatat
aaaattggtgataaactaaatgctgatttagttgaaaagattgaaaaacaaacccaacca
cctgctcgttttaatgaagcatcactcattaaagcattagaagcaaacggtattggtaga
ccatctacatatgcaagtatcattaaaacgattaaagcacgcgactatgttattgtagat
gaaaaacgatttattccaacagaacaaggaaagctgacagtagataccttgaatcaatac
tttaataaaatcatgaaaattgattatacatctaatatggaatcagaacttgacttaatt
gcagatggtaaagttgatcatattcaattattgaaagatttttacaataaatttatgccg
attttagaagctgctcaacaaaatatggaaaaaataaaaccggttgtaactgataaaata
tgtccactgtgcggtggaaacctagttattagaaaatctagatatggtgagttctatggt
tgcagcaattttccgaagtgtaaacacattgaacagatgtcggaataa
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