Aspergillus clavatus: ACLA_054040
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Entry
ACLA_054040 CDS
T01148
Name
(RefSeq) nuclear matrix protein
KO
K12878
THO complex subunit 1
Organism
act
Aspergillus clavatus
Pathway
act03013
Nucleocytoplasmic transport
act03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
act00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACLA_054040
09122 Translation
03013 Nucleocytoplasmic transport
ACLA_054040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
act03019
]
ACLA_054040
03041 Spliceosome [BR:
act03041
]
ACLA_054040
Messenger RNA biogenesis [BR:
act03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
ACLA_054040
Spliceosome [BR:
act03041
]
Complex C
Other components
EJC/TREX
ACLA_054040
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
ACLA_054040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Wap1
Motif
Other DBs
NCBI-GeneID:
4707077
NCBI-ProteinID:
XP_001274784
UniProt:
A1C934
LinkDB
All DBs
AA seq
669 aa
AA seq
DB search
MAVAELEAMRVYRGLVNNLLERAAQVKEDGQIKPPLTEAHLGESIWSTQGEDKQEVEQVS
QQTQFAAVELAFREKFYSLLAITSIDEPSFIQIWNLLDIISIFSDNEQCEPGLIFWLIEE
MLDSQTIDGCRKVFDYLESRRERNTKKHFKQKSLIILRSCNELLRRLSRAEDTVFCGRVF
IFLFQSFPLGDKSAVNLRGEYHTENVTTFDETVQSNTQGNDDMDVEMSDGKPALAAPEGQ
GADRESQPPSSGRDSQTPAPDQAKIPKLVVSGNEDKSTDKDVDLSTLYPMFWGLQAYFSA
PTKVFDPQHFASFKKGLENTLTVFKTIRTDLESQSASRTAEEIRKSNKRKRTTDGQEIAS
SFNPKYLTSRDLFDLEVNDTAFRRHVLVQALILLDFMLSLTPKAKAKLADLTNKSVLYGF
VLSEEDAKWASRMRKVIEEYLQEGAGGKFYYRMVDTVLSRDKNWVRWKAEGCPLIEKPAV
SVTEYLGARENATKTYANKRLRPSPMGSLNLNFLTEAESSVSLERLKEQERYTVPAADSF
MMGLMDDELDIDTAQTKEDREMAMRAKASKTWRILRLSAKGKLAAFDKIDDGKNLKVLFE
TPPPLEGTSQANEPSSQASEVPGKPSDEPEATIQEQDDGTAEKDAATTTEPSSGSESNEG
VALVGMPAT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgcagaattagaggcgatgcgcgtctacaggggattggtcaacaatctcctg
gaacgagcagcgcaggtcaaagaagatggacaaattaagcctccattgacagaagctcac
cttggtgaatcgatttggtcaacccaaggagaagacaagcaagaggtggaacaggtgagc
caacagacacaatttgcagcagttgaacttgccttcagggaaaaattctacagtcttctg
gcgattacttcaattgacgaaccgtctttcatacaaatatggaatctacttgatattatt
tccattttctcggataatgagcaatgtgagcctggcctgattttctggctcattgaggag
atgctcgatagtcaaaccatagatggctgccggaaagtctttgattacttggaatctcga
cgtgagcggaacacgaagaaacacttcaagcagaagagtttgatcatcctaaggtcctgc
aatgaattgcttcgaaggctatctcgggcggaagatacggttttttgcggccgtgtcttt
atattcctcttccagagtttcccacttggagacaaaagcgccgtcaatctccgcggtgaa
taccacactgagaatgtgactacattcgacgaaactgtgcagtcaaatacccagggcaat
gacgatatggatgtggagatgtccgatggaaagccagcattagcggcgcctgaaggccag
ggtgctgatagggaaagtcaaccgccgtcatcaggtcgggattcccagacacccgcgccc
gaccaagccaagattccgaaacttgtggtctcagggaatgaagacaagtctacggataag
gacgtagatctaagcacattgtatcccatgttctgggggctgcaggcttacttctctgcc
ccaacgaaagtattcgacccgcaacacttcgcatcgttcaagaaaggcctcgagaataca
ttgactgttttcaaaaccatccgaacagacctcgagagtcagagtgccagccggactgcg
gaggaaatccggaaatccaacaagcggaaacggacaacggatggtcaagaaattgccagc
agtttcaaccccaaatatctgacaagtcgggatctattcgacctcgaagtcaacgacaca
gctttcagaagacatgtccttgtacaggctttgatccttctggatttcatgctttcgctt
actcccaaagcaaaagcgaaattggctgatttgactaacaaatccgtactctatggcttt
gtcctgagtgaagaagatgccaaatgggcaagcaggatgagaaaagtgattgaagaatac
cttcaggagggggcaggaggcaaattctactatcgcatggtggataccgttctttcaagg
gacaagaattgggtacgctggaaagcagagggttgtccgctcattgagaagcctgcagtt
tcggtaaccgaatatctcggggcgcgcgagaatgcaacaaagacatacgcaaataagcgc
cttcgcccttctcccatgggctcgttgaatctcaattttctgacagaagcagaatcatcg
gtcagtctggaaaggctcaaggaacaggaaagatacactgtccccgccgctgactcattc
atgatggggctcatggacgatgagctggatatagacactgcccagacaaaagaagacagg
gaaatggcgatgcgagccaaggccagcaagacctggcgcattctacgactttccgccaaa
ggcaaacttgcagcgtttgacaaaatcgacgatggcaagaatttgaaagttctttttgaa
actcctccaccgcttgaaggcacatcccaggccaacgagccatcttcgcaggcttcagag
gtaccaggaaagccatctgatgaacccgaagctaccatacaagagcaagatgatggaacc
gccgagaaggatgccgcgaccacgaccgagcctagttctgggagtgagagtaatgaaggg
gtagctctggtgggtatgccggcgacctga
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