KEGG   Aspergillus clavatus: ACLA_054040
Entry
ACLA_054040       CDS       T01148                                 
Name
(RefSeq) nuclear matrix protein
  KO
K12878  THO complex subunit 1
Organism
act  Aspergillus clavatus
Pathway
act03013  Nucleocytoplasmic transport
act03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:act00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ACLA_054040
  09122 Translation
   03013 Nucleocytoplasmic transport
    ACLA_054040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:act03019]
    ACLA_054040
   03041 Spliceosome [BR:act03041]
    ACLA_054040
Messenger RNA biogenesis [BR:act03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     ACLA_054040
Spliceosome [BR:act03041]
 Complex C
  Other components
   EJC/TREX
    ACLA_054040
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    ACLA_054040
SSDB
Motif
Pfam: efThoc1 Wap1
Other DBs
NCBI-GeneID: 4707077
NCBI-ProteinID: XP_001274784
UniProt: A1C934
LinkDB
AA seq 669 aa
MAVAELEAMRVYRGLVNNLLERAAQVKEDGQIKPPLTEAHLGESIWSTQGEDKQEVEQVS
QQTQFAAVELAFREKFYSLLAITSIDEPSFIQIWNLLDIISIFSDNEQCEPGLIFWLIEE
MLDSQTIDGCRKVFDYLESRRERNTKKHFKQKSLIILRSCNELLRRLSRAEDTVFCGRVF
IFLFQSFPLGDKSAVNLRGEYHTENVTTFDETVQSNTQGNDDMDVEMSDGKPALAAPEGQ
GADRESQPPSSGRDSQTPAPDQAKIPKLVVSGNEDKSTDKDVDLSTLYPMFWGLQAYFSA
PTKVFDPQHFASFKKGLENTLTVFKTIRTDLESQSASRTAEEIRKSNKRKRTTDGQEIAS
SFNPKYLTSRDLFDLEVNDTAFRRHVLVQALILLDFMLSLTPKAKAKLADLTNKSVLYGF
VLSEEDAKWASRMRKVIEEYLQEGAGGKFYYRMVDTVLSRDKNWVRWKAEGCPLIEKPAV
SVTEYLGARENATKTYANKRLRPSPMGSLNLNFLTEAESSVSLERLKEQERYTVPAADSF
MMGLMDDELDIDTAQTKEDREMAMRAKASKTWRILRLSAKGKLAAFDKIDDGKNLKVLFE
TPPPLEGTSQANEPSSQASEVPGKPSDEPEATIQEQDDGTAEKDAATTTEPSSGSESNEG
VALVGMPAT
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggcagttgcagaattagaggcgatgcgcgtctacaggggattggtcaacaatctcctg
gaacgagcagcgcaggtcaaagaagatggacaaattaagcctccattgacagaagctcac
cttggtgaatcgatttggtcaacccaaggagaagacaagcaagaggtggaacaggtgagc
caacagacacaatttgcagcagttgaacttgccttcagggaaaaattctacagtcttctg
gcgattacttcaattgacgaaccgtctttcatacaaatatggaatctacttgatattatt
tccattttctcggataatgagcaatgtgagcctggcctgattttctggctcattgaggag
atgctcgatagtcaaaccatagatggctgccggaaagtctttgattacttggaatctcga
cgtgagcggaacacgaagaaacacttcaagcagaagagtttgatcatcctaaggtcctgc
aatgaattgcttcgaaggctatctcgggcggaagatacggttttttgcggccgtgtcttt
atattcctcttccagagtttcccacttggagacaaaagcgccgtcaatctccgcggtgaa
taccacactgagaatgtgactacattcgacgaaactgtgcagtcaaatacccagggcaat
gacgatatggatgtggagatgtccgatggaaagccagcattagcggcgcctgaaggccag
ggtgctgatagggaaagtcaaccgccgtcatcaggtcgggattcccagacacccgcgccc
gaccaagccaagattccgaaacttgtggtctcagggaatgaagacaagtctacggataag
gacgtagatctaagcacattgtatcccatgttctgggggctgcaggcttacttctctgcc
ccaacgaaagtattcgacccgcaacacttcgcatcgttcaagaaaggcctcgagaataca
ttgactgttttcaaaaccatccgaacagacctcgagagtcagagtgccagccggactgcg
gaggaaatccggaaatccaacaagcggaaacggacaacggatggtcaagaaattgccagc
agtttcaaccccaaatatctgacaagtcgggatctattcgacctcgaagtcaacgacaca
gctttcagaagacatgtccttgtacaggctttgatccttctggatttcatgctttcgctt
actcccaaagcaaaagcgaaattggctgatttgactaacaaatccgtactctatggcttt
gtcctgagtgaagaagatgccaaatgggcaagcaggatgagaaaagtgattgaagaatac
cttcaggagggggcaggaggcaaattctactatcgcatggtggataccgttctttcaagg
gacaagaattgggtacgctggaaagcagagggttgtccgctcattgagaagcctgcagtt
tcggtaaccgaatatctcggggcgcgcgagaatgcaacaaagacatacgcaaataagcgc
cttcgcccttctcccatgggctcgttgaatctcaattttctgacagaagcagaatcatcg
gtcagtctggaaaggctcaaggaacaggaaagatacactgtccccgccgctgactcattc
atgatggggctcatggacgatgagctggatatagacactgcccagacaaaagaagacagg
gaaatggcgatgcgagccaaggccagcaagacctggcgcattctacgactttccgccaaa
ggcaaacttgcagcgtttgacaaaatcgacgatggcaagaatttgaaagttctttttgaa
actcctccaccgcttgaaggcacatcccaggccaacgagccatcttcgcaggcttcagag
gtaccaggaaagccatctgatgaacccgaagctaccatacaagagcaagatgatggaacc
gccgagaaggatgccgcgaccacgaccgagcctagttctgggagtgagagtaatgaaggg
gtagctctggtgggtatgccggcgacctga

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