KEGG   Actinoplanes sp. N902-109: L083_0502Help
Entry
L083_0502         CDS       T02655                                 

Definition
(GenBank) DNA polymerase LigD, polymerase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
actn  Actinoplanes sp. N902-109
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:actn00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    L083_0502
Enzymes [BR:actn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     L083_0502
DNA repair and recombination proteins [BR:actn03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     L083_0502
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
523682..524605
Genome map
AA seq 307 aa AA seqDB search
MAAEPSRERFAVHIDGRDLELSNLDKVMYPAAGFTKGEVIDYYTRVAPVLLPHLKDRALT
RIRFPNGVDGAHFFEKNAPQGTPSWVRLATLPVPGSTKSRETIDFVVVDELAALVWVANL
ASLELHTPQWRVGQHPDLLVVDLDPGAPAGLRECCAVAMLMRDRLGEDGLSAYPKTSGKK
GMQLCVPIAGEQDSETVSTYAKRVAEELSAQVPGSITAKMAKAIRPGKIFIDWSQNAAAK
TTVAPYSLRAQGSPTASTPLTWDEVAAMALGDEPARQFAAAEVLDRLAQYGDLLADLLVP
GPRVPLG
NT seq 924 nt NT seq  +upstreamnt  +downstreamnt
atggcagctgagccttcccgcgagcgcttcgcagtccacatagacggccgcgacctggag
ctgtccaacctcgacaaggtcatgtatccggccgccgggttcaccaagggcgaggtcatc
gactattacacccgggtggcgccggtgctgctgccgcacctcaaggaccgggcgctgacc
cgcatccgcttccccaacggcgtcgacggtgcgcatttcttcgagaagaacgcaccccag
ggcaccccttcctgggtacggctggcgacgttgccggtcccgggcagcaccaagtcgcgc
gagacgatcgacttcgtggtcgtggacgagctggccgcgctggtgtgggtggccaacctg
gcctcgctcgaactgcacacgccgcagtggcgggtcgggcagcacccggatctgctggtg
gtcgacctcgatccgggggcgccggccgggctgcgggaatgctgtgcggtggccatgctc
atgcgcgatcggctgggcgaggacgggctgagtgcgtacccgaagacctcaggcaagaag
gggatgcagctctgcgtgccgatcgccggggagcaggactccgagacggtctcgacgtac
gcgaagcgggtcgcggaggagctgtccgcgcaggtgcccggttcgatcacggccaagatg
gcgaaggcgatccggcccggcaaaattttcatcgactggagtcagaacgcggcggccaag
accacggtggcgccctattcgttgcgcgcccaggggtcacccaccgcgtccacgcctctg
acctgggacgaagtggccgcgatggcgttgggcgacgagccggcgcggcagttcgcggct
gctgaggtgcttgaccggctcgcgcagtatggggacctgctcgcggacctgctcgtgccg
gggccgcgcgtgccgctcggctga

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