Anser cygnoides domesticus (swan goose): 106029400
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Entry
106029400 CDS
T04896
Symbol
POLR2A
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
acyg
Anser cygnoides domesticus (swan goose)
Pathway
acyg03020
RNA polymerase
acyg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106029400 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
106029400 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acyg03021
]
106029400 (POLR2A)
03400 DNA repair and recombination proteins [BR:
acyg03400
]
106029400 (POLR2A)
Enzymes [BR:
acyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106029400 (POLR2A)
Transcription machinery [BR:
acyg03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106029400 (POLR2A)
DNA repair and recombination proteins [BR:
acyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106029400 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_6
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-GeneID:
106029400
NCBI-ProteinID:
XP_047912449
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MHGGPPSGDSACPLRTSPPPGNMTECPGHFGHIELAKPVFHVGFLGKTMKILRCVCFFCS
KLLVDANNPKIKDILGKSKGQPKKRLTHVYDLCKGKNICEGGEEMDHKFGVEQPEGDEDL
TKEKVRTPPFYPPLTHLYPLYPPISLLVSPSSLLYPFXPSLPHPINPLIPPLSPVPTLSP
PPPRALLGSLLGRXPPPASPPQDDLTHKLADIVKINNQLRRNEQNGAAAHVIAEDVKLLQ
FHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFSARTVITPDP
NLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRF
HPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLRYLRR
PKTAPNGPKMALRSPKRPQTPQKTSPQVGILGAHLVMAGRIWGAFGASLPRKNASGHRGP
TWELQSDPVRTLAGRRHPSGVLGCLLGPLRVPSLQGEVMNLLMFLSTWDGKVPQPAILKP
RPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCK
KSLGTSAGSLVHISYLEMGHDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDI
QNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSE
YNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGF
VENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNS
INQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEELVKDI
LSNAHIQNELEREFEKMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPS
DLHPVKVVEGVKELSRKLVIVNGEDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSG
EAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVP
RLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQ
STVVAEDQEWVNVYYEMPDFDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGG
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgcacggggggccgccgtcgggcgacagcgcctgcccgctgcgcaccagccccccccca
ggtaacatgacggagtgcccggggcacttcgggcacatcgagctggccaagcccgtgttc
cacgtgggcttcctgggcaagacgatgaagatcctgcgctgcgtctgcttcttctgctcc
aagctgctggtggacgcgaacaaccccaaaatcaaggacatcctgggcaagtcgaagggg
cagcccaagaagcggctgacacacgtctacgacctgtgcaaggggaagaacatctgcgag
ggcggcgaggagatggaccacaagttcggggtcgagcagcccgagggtgacgaggacctg
accaaggagaaggtgcggaccccccccttttatcccccattaacccacctgtaccccctt
tatccccccattagcctccttgtatccccttcatccctcctgtaccccttttagccctca
ttaccccaccccattaacccccttatccccccattaagccctgtgcccactttatcccct
ccaccaccccgggcccttttggggtcccttttggggcgctgacccccccccgcgtccccc
ccccaggacgacctgacgcacaagctggccgacatcgtgaagatcaacaaccagctgcgg
cgcaacgagcagaacggggcggccgcgcacgtcatcgccgaggacgtcaagctgctgcag
ttccacgtcgccaccatggtggacaacgagctgcccgggctgccccgcgcgatgcagaag
tcggggcgcccactgaagtcgctgaagcagcggctgaagggcaaggagggccgcgtgcgg
ggcaacctgatgggcaagcgcgtggacttctcggcgcgcaccgtcatcacgcccgacccc
aacctggccatcgaccaggtgggcgtcccccgctccatcgccgccaacatgaccttcgcc
gagatcgtcacccccttcaacatcgaccggctgcaggagctggtgcgccgggggaacagc
cagtacccgggggccaagtacatcatcagggacaacggggaccgcatcgacctgcgcttc
caccccaagcccagcgacctgcacctgcagaccggctacaaggtggagcggcacatgtgt
gacggggacatcgtcatcttcaaccggcagcccacgctgcacaagatgtccatgatgggg
caccgcgtgcgcatcctgccctggtccaccttccgcctcaacctcaggtacctgcgccgc
cccaaaacggccccaaatggccccaaaatggccctgcgatccccaaaacggccccaaacc
ccccaaaaaacatccccacaagttggcattttgggagcacacttggttatggcgggtagg
atttggggtgcttttggggcatccctgccccgtaagaacgcttcgggacatcgcgggccc
acctgggagctccagagcgaccccgttaggaccctggcggggcgtcgccacccctcgggg
gttttggggtgccttttggggccgctgagggtgccgtccctgcagggcgaggtgatgaac
ctgctgatgttcctgtcgacgtgggacgggaaggtgccgcagcccgccatcctcaagccc
cggccgctgtggacggggaaacaaatcttctccctcatcatccccgggcacatcaactgc
atccgcacccacagcacccaccccgacgacgaggacagcgggccctacaagcacatctcc
cccggggacaccaaggtgatcgtggagaacggggagctgatcatgggcatcctgtgcaag
aagtcgctgggcacgtcggcgggctcgctggtgcacatctcctacctggagatgggccac
gacaccacgcgcctcttctacagcaacatccagaccgtcatcaacaactggctgctcatc
gagggccacaccatcggcatcggggactcgatcgcggacgcgaagacgtaccaggacatc
cagaacaccatcaagaaggccaagcaggatgtcatcgaggtgatcgagaaggcgcacaac
aatgagctggagcccacgccgggcaacacgctgcggcagaccttcgagaaccaggtgaac
cgcatcctcaacgacgcccgtgacaagacgggctcctccgcccagaaatccctctccgag
tacaacaacttcaagtccatggtggtgtcgggcgccaagggctccaagatcaacatctcc
caggtcatcgcggtggtggggcagcagaacgtggagggcaagcgcatccccttcggcttc
aagcaccgcacgctgccccacttcatcaaggacgactacggccccgagagccgcggcttc
gtggagaactcctacctggccggcctcaccccaaccgagttcttcttccacgccatgggc
ggccgcgaggggctcatcgacaccgccgtcaagacggccgagaccgggtacatccagcgg
cgcctgatcaagtcgatggagtcggtgatggtgaagtacgacgccaccgtgcgcaactcc
atcaaccaggtggtgcagctgcgctacggcgaggacgggctggccggggagagcgtcgag
ttccagaacctcgccaccctcaagccctccaacaaggccttcgagaaaaagttcaagttc
gactacaccaacgagcgggcgctgcggcggacgctgcaggaggagctggtcaaggacatc
ctcagcaacgcgcacatccagaacgagctcgagcgcgagttcgagaagatgcgggaggac
cgcgaggtgctgcgcgtcatcttccccacgggggacagcaaggtggtgctcccctgtaac
ctcctgcgcatgatctggaacgcccagaagattttccacatcaactcccgcctgccctcg
gacctgcacccggtcaaggtggtggagggggtgaaggagctgagccgcaagctggtgatc
gtgaacggggaggacccgctgagccggcaggcgcaggagaacgccacgctgctcttcaac
atccacctgcgctccacgctctgcagccgccgcatggtggaggagttccgcctgagcggg
gaggccttcgactggctgctgggcgagatcgagtccaagttcaaccaggccatcgcgcac
cccggggagatggtgggggcgctggcggcgcagtctctgggcgagccggccacgcagatg
accctcaacaccttccactacgccggcgtgtcggccaagaacgtgacgctgggcgtgccg
cgcctcaaggagctcatcaacatctccaagaagcccaagacgccctcgctcaccgtcttc
ctgctgggccagagcgcccgcgacgccgagcgcgccaaggacatcctgtgccgcctggag
cacacgacgctgcgcaaggtgacggccaacacggccatctactatgaccccaacccgcag
agcacggtggtggccgaggaccaggagtgggtcaacgtctactacgagatgcccgacttc
gacgtcagccgcatctcgccctggctgctgcgcgtcgagctcgaccgcaagcacatgacg
gaccgcaagctcaccatggagcagattgccgagaagatcaacgccggtggg
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integrated database retrieval system
