Acidithiobacillus caldus ATCC 51756: Acaty_c0612
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Entry
Acaty_c0612 CDS
T03561
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acz
Acidithiobacillus caldus ATCC 51756
Pathway
acz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Acaty_c0612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acz03021
]
Acaty_c0612
03400 DNA repair and recombination proteins [BR:
acz03400
]
Acaty_c0612
Enzymes [BR:
acz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Acaty_c0612
Transcription machinery [BR:
acz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Acaty_c0612
DNA repair and recombination proteins [BR:
acz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Acaty_c0612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AIA54492
UniProt:
A0A059ZX48
LinkDB
All DBs
Position
614115..618263
Genome browser
AA seq
1382 aa
AA seq
DB search
MKDLLKLFKQNDRQEEFDAIRIGIASPDKIRSWSYGEVKKPETINYRTFKPEREGLFCAK
IFGPIKDYECLCGKYKRLKHRGVVCEKCGVEVTQARVRRERMGHIELASPVAHIWFLKSL
PSRMGMILDMALRDIERVLYFEAYVVVDPGLTPLDRGTILSEDQYLDALEEHGDEFVAKM
GAEGIRDLLRAIPLKEEIEKTRTELQESNSDTKTKKLAKRLKILEAFETSGNRPEWMIME
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAIAGPNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPE
LRLHQCGLPKKMALELFKPFIFNKLEERGLATTIKAAKRLVEQEKPEVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLSLEAQLEA
RTLMMSTNNILSPANGEPIIVPSQDIVLGLYYVSQERAGAPGTGSVFADTAEVRRAYDTG
QVGLHARITMRFRGERVETTVGRALLADILPEGLPFSIINRVLKKKVIAELINTCYRTLG
VKDTVIFADQLMYTGYRMATRGGISFGAGDMVTPPEKETILARAEEEVKTIQEQYTSGLV
TEGERYNKVVDIWSRATDEVAKAMMDLVSKEKVVLADGKEVQQDSFNSIFMMADSGARGS
AAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANS
GYLTRRLVDVTQDLVVVEHDCGTEDGLPMMPLVEGGEVIEALRDRVLGRVTAEDIQHPNS
GEVVIPRNTLLTEKLLSTLDELGIDSLKVRSPLTCKSRHGVCALCYGRDLARGHLVNIGE
AVGVIAAQSIGEPGTQLTMRTFHIGGAASRAVSQSSIDIKQGGAIRYQPNLRLVTHPSGR
HVVVARNGEITVTDDQGREKERYKVPYGATILVDDGATVTAGKRIAEWDPHTRPIVSEIG
GRAVLKDVVEGVSVQVQSDDITGLSTWMVLDAKQRPAAGRDLRPMITLQDEQGQDLKLPG
TDLPARYFLPARAVLAVQEGSAVQPGDILARLPVGTSKTRDITGGLPRVAELFEARRPKD
FAIVAEHDGIVSFGKDTKGKQRLIITDEHNEQHEYLIPKGRHVTVHDGERVSPGEPLVEG
QPVPHDILRVLGVQALANYIVDEVQDVYRLQGVRINDKHIEVILRQMLRKVEITYAGDTS
FIPGDQVDRARVEEENAAAEAAGKEPARFTPMLLGITKASLSTESFISAASFQETTRVLT
EAAVAGKVDDLRGLKENVIVGRLIPAGTGLAYHEHRRRRNRGLPIMAEGESEPAESTVAE
LR
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttactgaagctgttcaagcagaacgatcgccaggaagaattcgacgccatc
cgtatcggtatcgcgtcgccggataagatccggtcctggtcctacggcgaggtgaaaaag
cccgagaccatcaactaccgtaccttcaagcccgagcgggaaggcttgttctgcgccaag
atcttcggtcccatcaaggactacgaatgtctgtgcggcaagtacaagcgtctcaagcac
cgcggagtggtctgcgagaagtgcggcgtcgaggtgacccaggcgcgggtgcggcgcgag
cgcatggggcacatcgaactggccagccccgtcgcccatatctggttcctgaagtctctc
cccagccgcatgggcatgattctggacatggccctgcgggatatcgagcgcgtcctctac
ttcgaagcctacgtggtggtggacccgggtctgacgcccttggatcgcggtaccatcctc
agtgaagatcaatatctggacgcccttgaagagcatggcgatgagttcgtcgcaaagatg
ggtgccgagggtatccgcgatctgttgcgcgccattccgctcaaggaagagatcgagaag
acccgcacggagctgcaggagagcaattccgacaccaagaccaagaagctggccaagcgc
ttgaagatcctcgaggccttcgagacctccggcaatcgtcccgagtggatgatcatggag
gtattgccggtgctgccaccggatctgcggcccttggtacccctggacggtggccgtttt
gcgacctccgatctcaacgatctctaccgtcgggtcatcaatcggaacaaccgcctcaag
cgtttgctggagctcaaggccccggacatcattgtccgtaatgaaaagcgcatgctccag
gaggccgtggacgccctgctcgacaatggccgccgcggtcgggccatcgctggtcccaac
aagcggcccctgaagtctctggcggatatgatcaagggcaagcaggggcgtttccgtcag
aatctgctgggcaagcgggtggattattccggacgctcggtgatcgtggtggggccagag
ttgcgcctacaccagtgcggactacccaagaaaatggcgctggagctcttcaagcccttc
attttcaacaagctggaagagcgggggctcgccaccaccatcaaggcggccaaacgcttg
gtggaacaggagaaacccgaggtctgggatatcctggaagaggtcatccgcgagcatccg
gtcatgctcaaccgggcaccgaccctgcaccgtctgggcatccaggccttcgagccggtc
ctcatcgaaggcaaggccatccagctgcatcccttggtctgtgcagcctacaacgccgac
ttcgacggcgaccagatggcggtgcacgtgcccctgtcgctggaagcgcagctagaggcc
cggaccctcatgatgtccaccaacaacatcctgagccccgccaacggggagcccatcatc
gtaccctcccaagacatcgttctgggtctatactacgtcagccaggagcgcgcgggcgcg
ccgggtaccgggagcgtctttgcggacactgccgaggtgcgccgtgcctacgatacggga
caggtgggattgcatgcgcgcatcaccatgcgttttcgcggtgaacgggtagagacgacg
gtgggccgggcgctgctggccgatatcctgcccgagggcctgcccttcagcatcatcaat
cgcgtcctgaaaaagaaggtcatcgccgaactcatcaatacctgttaccgcactctgggc
gtgaaggatacggtgatctttgccgatcagctcatgtacaccggctatcgcatggccacc
cgcggtggtatctcctttggcgccggcgacatggtgacgccgccggaaaaggaaacgatc
ctcgcccgggccgaagaggaggtcaaaaccattcaggagcagtacacctcgggcctggtc
accgagggggagcgctacaacaaggtggtggacatctggtcgcgggcgaccgacgaggtg
gccaaggccatgatggatctggtgagcaaggaaaaggtggtgcttgccgatggcaaggag
gtccagcaagactccttcaactccatcttcatgatggccgactccggcgcccgtggttcg
gcggcgcagattcgccagctcgccggcatgcgcggcctgatggccaagcccgacggctcc
atcatcgagacgcccatcaccgcgaacttccgcgagggattgaacgtcctgcagtacttc
atctccacccacggcgcgcgcaagggtctggcagatacggccctgaagacagccaattcc
ggttatctcacccgccgtctggtggatgtcacccaggacttggtcgtggtggagcacgac
tgtggcacggaagatggcctgcccatgatgcccctggtggagggcggtgaagtcatcgag
gctctgcgcgatcgcgtcctcggccgggtcacggcggaggatatccagcaccccaatagc
ggtgaggtggtcatcccccgcaacaccctcttgacggagaagttgctgtctaccttggac
gagctgggtatcgactccctcaaggtgcgttcgccgctcacctgcaagtcgcgccacggc
gtgtgcgccctgtgctacggccgcgatctggcccgcgggcatctggtgaacatcggtgaa
gcagtgggcgtcatcgcggcgcagtccatcggtgagccgggcacacagctgaccatgcgc
accttccacatcggtggtgccgccagtcgggccgtgtcccagagcagtatcgacatcaag
cagggcggcgccattcgctatcagcccaacctgcgcttggtaacccaccccagcgggcga
cacgtggtggttgcccgcaatggcgagatcaccgtcaccgacgatcagggtcgagaaaag
gagcgttacaaggtcccctatggcgccaccatcctggtggacgacggtgccaccgtcacg
gcgggcaagcgtattgccgagtgggacccccacacgcgacccatcgtcagcgaaatcggt
ggacgggcggtgctcaaggatgtggtggagggtgtcagcgtacaggtgcagagcgacgat
atcacgggcctctccacctggatggtgctggacgccaagcagcgacctgctgccggtcgt
gacctgcggcccatgatcaccctgcaagacgagcaggggcaggacctgaagctccccggt
acggatctgccggcgcggtacttcctgccggcccgggcggtgttggcggtgcaggaaggc
tccgcggtacagcccggcgatattcttgcccgtttgcctgtgggtaccagtaaaacccgc
gacatcaccggcggtctgccgcgcgtggcggaactcttcgaggcgcgccggcccaaggac
tttgccatcgtcgccgaacacgacggtatcgtcagtttcggcaaggataccaagggcaag
cagcgccttatcatcaccgacgagcacaatgagcagcacgaatacctcatccccaagggc
cgtcacgtcacggttcacgatggcgagcgggtcagtcccggcgagcccctggtcgaaggt
cagccggttccccacgatatcctgcgggtactgggggtccaggctctggccaattacatc
gtcgatgaggtccaggacgtctaccgcctacagggtgtgcgcatcaacgacaagcacatc
gaggtgatcttgcggcagatgctgcgcaaggtggagatcacctacgctggtgacaccagc
ttcatcccgggagaccaggtggatcgtgcccgtgtggaagaggaaaacgcagcagcggaa
gcggcgggaaaggaacctgcgcgcttcacccccatgctgctgggtatcaccaaggcgagt
ctgtccaccgagtccttcatctcggcggcgagcttccaggagaccacccgggtgctcacg
gaagcggcagtggccggcaaggtggacgacctgcgcggtctcaaggagaacgtcatcgtc
ggtcgtctcattcctgctggcaccggcctcgcgtatcacgaacaccggcgccgtcgcaat
cgcggtctgccgatcatggcagagggcgaaagcgagcccgcagaaagcacggtggcggaa
ctgcgttaa
DBGET
integrated database retrieval system