Auricularia subglabra: AURDEDRAFT_99449
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Entry
AURDEDRAFT_99449 CDS
T03129
Name
(GenBank) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
adl
Auricularia subglabra
Pathway
adl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AURDEDRAFT_99449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_99449
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
AURDEDRAFT_99449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
EJD51320
JGI:
99449
LinkDB
All DBs
AA seq
1110 aa
AA seq
DB search
MLSDNESIEVEKPRLSRLKRKADVDSELEEESFRSSSSEAGDRPSSPTTKLGANRRTKRP
RPSMLYLDEDEDEEPAQPQKKVTKKKTAAKKKRNTSDDDFLAPSGEESDKDVEVGVPSDV
DDDVKMSEDDEPVSKPKTKAKAAPKKVVTAAPAAGGDGGDLFMTAAERRVQTKKDGKKEQ
DECFSFLKDVRDKDGRAPSDPDYDPRTIYIPKSAWKSFTPFERQFWEIKQNQYDTVLFFQ
KGKFFELYENDARIGHQEFDLKLTERVKMCMVGVPEQSFDFWAVKFLMRGHKVGKVMQDE
TALGAEMRLAKTAGAKSKEDKIVRRVLNQVFTLGTLVDPLDEEAGHCVSVVESGDGRFGV
CVLDCSTSEFNMASFEDDPCRTKLETVLRRTRVKEMLGIKGNLTSETTRLLKTVLPGNCL
WTWQRSADVLSYEQTLQALKELYPQPEDAMEEDEYAGVPQSIRTMLHERAPIEALGATIA
YLRQLNLDKNILSMRNFNVLDPMRKGVGLLLDGQTLAHLEVLSNSDGTAEGSLLDLLGRC
VTPFGKRLFRMWLCAPLREAATINDRLDAVEDLMDHPSSAEQFAKLAKGVPDLERLLTRI
HAGKCKVKDFLKVLLTFLQTFKGLNDKLADLENAAKLKAPSLLRLFKSVPDLTPHVTAIE
EMYALDDDSLLPASGKDETYDQVIEEIEDIEGNLERKLDKFADVVGTKLTYWHSAQGQKE
IYIVQVPAAKTKKVPSDWVQTNSTKAMKRYDVPDLAPLIRKLKEARENRTAAINSFKSRV
FAAFDADRGIWLRAVRMLAELDCLFSLAKASEAIGATCRPEIVESDVASVEFKNLKHPAL
CLKRDEFIPNDVALGGSKPRVMLLTGPNMGGKSTLMRMTAAGVIMAQLGMLLPADSARIS
PVDAIMTRMGAYDNMFSNSSTFKVELDECCKILKEASPKSLVILDELGRGTSTYDGMAIA
GAVLHEIATHTLALSCFATHYSSLTDDYAYHPQIRNMHMATRVDDERRELVFLYKLVDGV
ATGSFGTHVASLAGVPSDVVERAEVISIDFAAKFKKKIEGKSRSALPLPVQADFAYLAKL
VSGLSLPDDSVRQREVLSTIRKTAAKLCAA
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggataatgaatcaatcgaggttgaaaagccgcgtctgagtcgactgaagcgg
aaggcagatgttgactcggagcttgaagaagaatcattcaggtcttcctctagcgaggcg
ggcgacaggccttcatctccgaccacgaaactcggagcgaatcgcaggaccaaacgtccg
cggccttctatgctctacctggacgaggacgaggacgaagaacctgcccagccgcagaag
aaagtaaccaaaaagaagaccgcagccaagaagaagcgcaacacctctgacgacgatttt
ctcgctccgagcggggaagaatctgacaaggacgtcgaggtcggtgttccctcggatgtg
gacgacgacgtcaagatgtccgaggacgacgagccggtatcgaaaccgaagacgaaggcc
aaggcggcgccgaagaaggtcgtaactgcggcgccggctgctggaggcgacggcggcgac
ctgttcatgaccgcggccgagcggcgcgtgcagacgaagaaggatggcaagaaggaacag
gacgagtgcttctcgttcctcaaggacgtgcgcgacaaggacggccgcgcgccgtccgac
cccgactacgacccgcggacaatctacatccccaagagtgcgtggaagagcttcacgccg
ttcgagcgccagttctgggagatcaagcagaaccagtacgacaccgtgctgttcttccag
aagggcaagttcttcgagctctacgagaacgacgcccgcatcggccaccaggagttcgac
ctcaagctcacagagcgcgtcaagatgtgcatggttggcgttcccgagcaaagcttcgac
ttctgggcggtgaaattcctcatgcgcgggcacaaggtcggcaaagtcatgcaagacgag
actgctctcggtgcggagatgcgcctcgctaagacggccggcgcgaagagcaaggaggac
aagatcgtgcggcgcgtcctgaaccaggtcttcacgcttggcaccctcgtcgatccgctg
gacgaggaggccggccactgcgtctccgttgttgagtctggcgatggtcgcttcggcgtc
tgcgtgctcgactgtagcacgagcgagtttaatatggcttcgtttgaggatgacccgtgc
cgcaccaagctcgagacagtgctgaggaggacgcgggttaaggagatgctcggtatcaag
ggcaacctgaccagcgagacgacgcgcttgctgaaaacggttttgcccggcaactgtctc
tggacttggcaacgttctgcggacgtcctttcgtacgagcagactcttcaggctctcaag
gagctctatccccagcctgaggacgcgatggaggaggatgaatacgctggcgtcccacag
agcataaggacgatgcttcacgagcgcgcaccgatcgaagcactaggcgcgaccatcgcc
tacctgcgccagctcaacctcgacaagaacatcctgagcatgcgcaacttcaacgtgctc
gaccccatgcgcaagggcgtcggcctcctcttggacggacagacactcgctcatctcgag
gtgctctcgaatagcgacgggacagccgaaggctcgcttctggatctcctggggcgctgc
gtcacgccgtttggcaagcgtctcttcagaatgtggctctgcgcgccgttgcgcgaggcg
gccacgatcaacgaccgtctcgacgcggttgaagacctgatggaccacccatcatccgcc
gagcagttcgccaagctcgcgaagggcgtcccagatctcgagcgcctgctgacgagaatt
cacgccgggaagtgtaaagtcaaggatttcctgaaggtcctcctgacgtttcttcagacg
ttcaaagggctgaatgacaaacttgccgacctcgagaatgccgcgaagctcaaggcgccg
agcctgttgcgtctgttcaagagcgtcccggatctgacgccacatgtaacggctatcgag
gagatgtacgccctagatgacgattctttgctgcctgcttctgggaaagacgagacatac
gatcaagtcatcgaggagattgaagatatcgaggggaacctggaaaggaaactcgataaa
ttcgcagatgttgtcgggacgaagttgacgtactggcatagtgcgcagggacagaaggaa
atttacatcgtccaagtgccagcggcgaagacgaagaaggtcccgtcagactgggtgcag
acgaacagcaccaaggcgatgaagcgctatgatgtccccgacctcgccccactcatccgc
aagctcaaggaagcgcgcgagaatcgcactgccgcaatcaactcgttcaagtcgcgcgtc
ttcgcagcgttcgacgcggaccgcggcatttggcttcgtgccgtgcgtatgctcgccgag
cttgactgcttattctcgctggccaaggcgagcgaggcgattggggcaacgtgtcgcccg
gagatcgtcgagagcgatgtcgccagtgtggagttcaagaacttgaagcacccagctctg
tgtctcaagagggacgagttcatcccgaacgacgtagctctgggcggctcaaagccacgg
gttatgctgttgacaggtcccaacatgggtggtaaatcgacgctcatgcgcatgactgca
gccggagtgattatggcccaacttgggatgctcctgcccgcggactccgcccgcatctcc
cccgtagatgccatcatgaccaggatgggagcctacgacaatatgttctctaactccagt
actttcaaggttgagctcgacgagtgctgcaagattctgaaagaagctagtcctaagtct
ttggttatcttggacgagctcggccgcggtacttcgacctacgatggcatggccatcgcc
ggagccgtcctgcacgaaatcgcgacgcatacgctcgccttgtcgtgttttgctacgcac
tactcgtcgctcaccgacgactacgcctatcatcctcagatcaggaacatgcacatggcg
acccgtgtcgatgacgaaaggcgcgagcttgtgttcctgtacaagctggtcgatggcgtg
gcgacaggctcttttggcacccacgtcgcgagcctcgccggggtaccctcagacgtcgtc
gagcgtgcggaagtcatctcgattgacttcgccgccaagttcaagaagaagatcgagggc
aagtcgcgcagcgcgctgcctttgcctgtccaggccgactttgcgtatcttgcgaagctc
gtcagtggtctttcgctccccgacgactcggtccgccaacgcgaagtcttgagtaccatc
cgcaagaccgccgcgaagctttgcgctgcgtag
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integrated database retrieval system
