KEGG   Aeromonas salmonicida O23A: O23A_p1327
Entry
O23A_p1327        CDS       T04990                                 
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
aeo  Aeromonas salmonicida O23A
Pathway
aeo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aeo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    O23A_p1327
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aeo03019]
    O23A_p1327
Messenger RNA biogenesis [BR:aeo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     O23A_p1327
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 P-loop_SecA Flavi_DEAD
Other DBs
NCBI-ProteinID: ARW82070
UniProt: A0A0W0ARQ8
LinkDB
Position
1383570..1384973
AA seq 467 aa
MSFSSLGLAEPLLRAVAEQGYDTPSPIQLQAIPAVLAGRDLMAAAQTGTGKTAGFTLPML
QRLMESKRKVSPNRIRALVLTPTRELAAQVGESVRNYGKHLPMRSHVVFGGVSINPQMMA
TRRGLDVLVACPGRLMDLYNQNAVKFDEVEILVLDEADRMLDMGFIRDIRKILALMPKQR
QNLLFSATFAEEIRELATGLLNNPAVIEVAPRNSTAERIEQLVHPCDKANKIGLLSHLVT
SNDWQQVLVFTRTKHMANRVAETLDKNGVSAAAIHGNKSQGARTRALAGFKDGNVKVLVA
TDIAARGLDIDKLPQVVNFELPNVAEDYVHRIGRTGRAGAAGHAISLVAADEGKLIKAIE
RLTKQNIPCEQVAGFEASRETLDNIARGIGAPLRKEPRDPSEPRRAAPRPQGQGQRQGAG
RSANGGNAGGARTGNSGKPKPQGAQRPVDAAGKPAQARRPRRATHNQ
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgagtttttcttccctcggtctggccgaacccttgttgcgtgccgttgccgagcaaggc
tacgacaccccgtctcccattcagctgcaagcgatccccgccgttctggctggccgcgac
ctgatggcggcggcccaaacagggactggcaagaccgcaggctttaccctgccgatgctg
cagcgtctgatggagagcaagcgcaaggtttctccgaaccgtattcgcgctctggtactg
accccgacccgtgagctggctgcccaggtgggcgagagcgtgcgcaattacggcaaacat
ttgccgatgcgcagccatgtggtatttggcggcgtcagcatcaatccgcagatgatggcg
actcgccgtggtctggacgtgctggtggcctgcccgggtcgcctgatggacctctacaac
cagaatgccgtcaagttcgacgaagtcgaaatactggtgctggacgaagcggatcgtatg
ctcgacatgggctttatccgcgatatccgcaagatcctggccctgatgcccaagcagcgt
cagaacctgctcttctccgcgaccttcgccgaagagatccgcgagttggccaccggcctg
ctcaacaatccggccgtgatcgaagtggcgccgcgcaacagcacggccgagcgtatcgag
cagctggtacatccgtgtgacaaggccaacaagataggtctgctgagccatctggtcacc
agcaatgactggcagcaggtactggtcttcacccgtaccaagcacatggccaaccgtgtt
gccgagaccctcgacaagaacggcgtcagcgctgccgccatccacggcaacaagagccag
ggtgcccgtacccgtgccctggccggtttcaaggatggcaacgtcaaggtgctggttgcg
accgacatcgctgcccgcggtctggacatcgacaagttgccgcaagtggtcaacttcgag
ctgcccaacgtggcggaagactatgttcaccgcatcggccgtaccggtcgtgccggtgct
gccggtcatgccatctccctggtcgctgccgatgaaggcaagcttatcaaggcgatcgag
cgtctgaccaagcagaacatcccgtgcgagcaggtggccggttttgaagcctcccgcgaa
accctggacaacattgcccgtggtatcggcgcgcccctgcgcaaagagcctcgtgacccg
agcgagccgcgccgtgcagcgccgcgtccgcaaggtcaaggccagcgtcagggcgccggt
cgctctgccaatggtggcaacgctggcggtgctcgcaccggcaacagtggcaagcccaaa
ccgcaaggtgcgcagcgtccggttgatgctgctggcaaaccggcccaggctcgtcgcccc
cgtcgcgctacccacaaccagtaa

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