Altererythrobacter epoxidivorans: AMC99_00952
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Entry
AMC99_00952 CDS
T04070
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
aep
Altererythrobacter epoxidivorans
Brite
KEGG Orthology (KO) [BR:
aep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aep03400
]
AMC99_00952
Enzymes [BR:
aep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMC99_00952
DNA repair and recombination proteins [BR:
aep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AMC99_00952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
DEAD
DUF1492
Motif
Other DBs
NCBI-ProteinID:
ALE16254
UniProt:
A0A0M4LTU6
LinkDB
All DBs
Position
901111..904560
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AA seq
1149 aa
AA seq
DB search
MSGAVLPLHGNQRLAVDPERNVWLSASAGTGKTQVLSARVLRLLLRPEVDPSEILCLTFT
KAGAAEMAVRINSVLARWVRLDDITLQNELEYLGAPYDPATRERARTLFASVLDCPGGGL
RIDTIHAFSQWLLANFPNEAELIPGARPMEDREREVLASDVLADMLAEAERTNDVATLDA
VADFTCRKDPDALRAWLMRCAKQRSLWFGRTAWQPPMRAQVLQLLGLPSDASEKHIAEMC
DDVTFDTVSLKRCWQTLSEWDAKAGREGSEAIAAWLSADAVGRAQSIDDLYFGLFTKTTD
APKQLANVLKRDAEYGNYIDRVKAHIDLIRSFRTLLDLADFLAPALELGRKFALAWDDAK
TREGLLDFDDLIFRAAILLKEQASADWIRYKLDRRFDHILVDEAQDTNRDQWDIVLDGLI
DDFFAGEGAAGNRLRTIFAVGDYKQAIFGFQGTSPENFEKARQRVKAMIGAASENLDRMR
SSSRMPVFSNLDLGQSFRTSASVLGFVDQAIEAIGPGALGLKEYHQHEGQDRPGLVTMWE
PVHDARANGGDDDKQNWLARHDRLLADKIADQVQRWTSEQEPFALAKGEPRNAGPGDIMV
LVRRRRELASLIVARLHAKGVPVAGVDRLRLGAPLAVKDLMAGLRFAAQPLDDLNLANLL
SSPLIGWSQDDLLAHCPRPEKKRLWHHLRESSEPLVAQTLARLRDLLTRADFDTPESLLH
WMLVGPWQGRRNLVARLGREANDPIDELINAAFAYESVHTPSLAGFIHWFDVGEGELKRD
AGEASNLVRVMTVHGSKGLQAPIVILADATGAPSDGGDLTLDEQLPGSTGREVPIPGLKK
EEIAGPLSDSKAAAAAAELQEHWRLLYVAMTRAEEALFIGGSLGPREAKGPHIDSWYARL
APLFGADGLTDELWGARREIGERAEPVVSSRDTAKSAASSLPSWAVTPIGPGPRPPRPLA
PSGAGEDQAADPPLAPAEARAAAQRGVLIHRLLERLPDVTVAERASAADAWLARQAADMT
PAARAEIVQHSLQVLEHPDFAHVFAPEALAEVPLAARVGGEVIAGIADRLLVEADRITVV
DFKTTRRPPEALDDVPAATLRQIAAYVAALGEIYPDREIVAALLYTHAPRLIVVDSGAIA
PFKTAFEEN
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgcggtccttcccctgcacggcaaccagcgactggcggtcgatccggaacgt
aacgtatggctctctgcctctgccgggacaggaaagacgcaggttctttccgcgcgcgtt
ttgcggctcttgcttagacccgaggtcgatccgtccgaaatcctctgcttgacctttacc
aaggcgggggctgccgaaatggcggtgcgcatcaattccgtgctggcgcggtgggtcagg
ctggatgacataacgctgcaaaacgagctcgaatatctcggggcaccctatgatccggca
acgagggagcgggcgcggaccttgtttgcgagcgtgctcgattgccccggtggcgggctc
aggatcgacacgatccacgctttctcgcagtggctgctagccaatttccccaacgaggcc
gaattgatccccggcgcaaggccgatggaggatcgcgagcgtgaagtcctggcaagcgat
gtcctggctgacatgcttgcagaagccgaacggacaaacgacgtcgccacgctcgatgcc
gttgccgattttacctgtcgcaaggatcccgatgcgctgcgagcatggctgatgcgctgc
gccaaacagcgatcgctctggttcggccggacggcatggcagccgccgatgcgcgcgcaa
gtcctccagcttctgggcctgcccagcgatgcgagtgaaaagcacattgcagaaatgtgc
gacgatgtgacgttcgacactgtaagcctgaaacgctgctggcagaccttgagcgaatgg
gacgcgaaagccggtagggaggggagcgaagccattgccgcgtggctatctgccgatgcc
gtcggacgcgcccagtccatcgacgatctttatttcggccttttcaccaagacgaccgat
gcaccgaagcaattggccaatgtgctgaaacgcgacgccgaatacggcaattacatcgat
cgcgtgaaagcacatatcgacctgatacggtcgttccggacactactggacctggcggac
ttcctcgcccccgcgctggaactcgggcggaaattcgccctggcatgggacgatgccaag
acgcgggaggggctgctcgatttcgacgacctcatctttcgcgcggccatcctgcttaag
gaacaggccagcgccgactggatccggtacaagctcgaccggcgtttcgatcacatcctc
gtcgacgaggcgcaggataccaatcgcgatcagtgggacatcgttctcgacggtctgatc
gacgatttcttcgcgggcgagggtgctgccggaaaccggttgcgcacgatcttcgccgtt
ggtgactacaaacaggcgattttcggtttccagggtaccagccctgaaaacttcgagaag
gcacgccagcgagtgaaagccatgatcggcgcggcgtcagagaacctcgaccggatgcga
agctcgtcccggatgccggtcttctccaacctcgatcttggccagtctttcaggacttcg
gcaagcgttctcggctttgtcgaccaggccatcgaggccattggtcccggagcgctgggg
ctgaaggaataccaccagcacgaaggtcaggaccgtccaggcctggtgaccatgtgggag
ccggttcacgacgcgcgcgccaatggcggtgacgacgacaagcagaactggctggcccgc
catgaccgcttgctggccgacaagatcgcggaccaggtccagcggtggacgagcgaacag
gagcccttcgcgcttgccaagggtgaaccgcgcaacgccgggccgggcgacatcatggtt
ctggttcgcaggcggcgcgaactcgcctcgttgatcgtcgcgcgattgcacgcgaagggc
gttccggttgctggcgtcgacaggttgaggctgggcgcgcccctcgccgtgaaggacctg
atggcggggctgcgattcgcagcacagccattggacgatctcaatctcgccaaccttttg
tcgtcgccattgatcggctggagccaggacgaccttctcgcccattgcccgcggcccgag
aagaaaaggctgtggcaccatttgcgcgaaagcagcgagcccttggtcgcgcaaaccttg
gcgcgtctgcgcgacctcctgacgcgcgcagatttcgatacgcccgaatccctgcttcac
tggatgctcgtcgggccgtggcagggcaggcgaaacctcgtcgcgcggctcggcagggag
gcgaacgatccgatcgacgaactaatcaatgcggccttcgcatacgagtcggtgcatact
cccagccttgccggcttcatccattggttcgatgtcggcgagggggaattgaagcgcgat
gcgggtgaagcgtccaatctcgtccgcgtgatgaccgtccacggctcgaaagggctacag
gcaccgattgtcatcctcgccgatgctaccggcgctccgagtgatggtggggaccttacg
ctcgatgagcagcttcccggctcgaccggtcgggaagtgcccattcccggcttgaagaag
gaagagatcgcggggcctctttctgacagcaaggcagcggcggcggcagcagaattgcag
gagcactggcgccttttatacgttgccatgacgcgtgcggaagaagcgcttttcattggc
ggctcgcttgggccgcgcgaagcgaaggggccgcatatcgatagctggtatgcgcggctt
gcccccctgttcggggcggatggactgacggacgagctgtggggcgctcgcagggaaatc
ggcgagcgggccgagcctgtcgtgagctctcgcgatacggccaagagcgctgcttcgtcg
ctcccgtcgtgggcagtgactccgatcggtccggggcctcggccaccgcgtccgttggcg
ccatccggggcaggagaagatcaggccgcagatccgccgttggcgcctgcagaggcccga
gcggctgctcaacggggtgtcctgatccaccgcctgctggagcgtttgcccgatgttaca
gtggcagaacgggccagcgctgccgacgcatggctggcgagacaggctgccgatatgacg
cctgccgcgcgcgcggaaatcgtgcagcattcgttgcaggttctcgagcatcccgacttt
gctcacgttttcgcacccgaagccttggcggaagtgccgctcgccgcgagagttggcggc
gaggtcatcgcaggtatcgccgacaggctgctggtagaagcggaccggatcacggtcgtc
gatttcaagacgacgcgccgcccgcctgaagctctggacgacgttccggcagcgacattg
aggcagatagcagcttatgttgccgccctgggcgagatctatccggatcgggagatagtt
gccgcccttctctatacccatgccccgcgtctgatcgtcgtggacagcggtgcaatcgcg
ccattcaagaccgcgtttgaggaaaactag
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