Alistipes finegoldii: Alfi_0469
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Entry
Alfi_0469 CDS
T02133
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
afd
Alistipes finegoldii
Pathway
afd03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Alfi_0469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afd03032
]
Alfi_0469
Enzymes [BR:
afd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Alfi_0469
DNA replication proteins [BR:
afd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Alfi_0469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_16
AAA_30
AAA_5
AAA_22
Ploopntkinase3
AAA
nSTAND3
IstB_IS21
NACHT
DAP3
Motif
Other DBs
NCBI-ProteinID:
AFL76863
UniProt:
I3YIP5
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All DBs
Position
complement(534648..536060)
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AA seq
470 aa
AA seq
DB search
MKREKQISYNRPAPVEGLPESPELERAVLGALILEPDQLSDVTEIVGISAFSDPNNGKIY
GAMLSMLEQGNKIDLCMLSQHPELKGREMVRYLVELTNSIGSAVNVLDHARQLADIEARR
RLIMLSYEIAAKSSAGTNSAEEICELVTNQIAALVSTTARVSDLIPLSDAVRATIDNLEL
RQQERQAGQCIGIPTGLQRLDALTGGWRGGQLVVLAGRPGTGKSAMMLHFARAAAVSGVP
VCVYSLEMCVEQLTGRMLVGSSGVSSGEFRTGNVDASGWTKIEKAGAKLSAMPVYLNDRA
NLTIGAIRSQCKAMRRRGRCGMVIIDYLQLLDTSSRNPNNTREREVAAASRSAKLLAKEL
NIPVILLSQLSRKVEDRLDKRPLLSDLRESGAIEQDADIVAFLDRPAMYGQTEIDAGRYG
IIPAEGVGLLHISKNREGEIGCICFRHNESLTRITDYENTADAIGEAEPF
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgaaaaacaaatttcctataaccgtccggcccctgttgaggggcttccggaa
tcgcccgaactcgaaagggccgttttaggcgctttaattctcgaaccggatcaattatcc
gacgtgacggagatcgtcggaatttcggccttttctgacccaaacaatggcaaaatttac
ggcgcgatgctctcaatgttggagcagggcaataaaattgatctttgtatgctttcgcag
catccggaactcaaggggcgggagatggtccgatacttggttgagttgaccaactcgata
gggtcggccgtcaacgttttggatcatgctcggcagctcgcagacatagaagcccggcgc
cgtcttatcatgctgagttatgaaatcgcagccaaatccagcgccggaacgaattccgcc
gaggagatatgcgaattggtcacaaatcagattgcggcattagtgtccacaacagcccgc
gtgagcgacctaataccgctgtctgacgctgttcgggcaactattgacaatttggagctg
cggcaacaagaaaggcaggccggccagtgcatcggcattcctaccgggttgcagcggctc
gacgctcttacaggcggctggcgtggcgggcagctcgtggtgctggctggacgtccggga
acggggaagagcgctatgatgctacattttgcccgtgctgcggccgtgtcaggcgttccg
gtgtgtgtctattcgctggaaatgtgcgtggaacagttgaccgggcgaatgcttgtcggc
agttcgggtgtaagttcgggagagttccgcaccggtaatgttgacgcttcgggctggacg
aagatcgagaaggccggcgcgaagctttctgcaatgcctgtttacctcaacgaccgggca
aatctcactattggggctatacgctcgcaatgcaaggcgatgcgccgccggggacggtgc
gggatggtcattatcgactacctgcaactgctcgatacgtcaagccgtaacccgaacaac
actcgcgagcgtgaggtcgccgccgccagccgttcggccaaactgctggccaaggaactc
aatatcccggttatcctgttgtcgcagttgtcccgcaaggttgaggacaggttggacaaa
aggccgctattgtcggacttgcgcgagtcgggagccatcgagcaggacgccgacatcgtc
gcattcctcgatcggccagcaatgtatggccaaaccgagatcgacgcaggacgctacggg
attattccggctgagggggtcgggttactgcacatctcaaaaaaccgcgagggggagata
gggtgcatttgttttcgacataacgagagcctgacccggataaccgactacgagaatacg
gcggacgcaatcggggaggccgagccgttttga
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