Alistipes finegoldii: Alfi_1960
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Entry
Alfi_1960 CDS
T02133
Name
(GenBank) DNA-binding domain-containing protein, AraC-type
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
afd
Alistipes finegoldii
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afd03000
]
Alfi_1960
Transcription factors [BR:
afd03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Alfi_1960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
AFL78269
UniProt:
I3YMQ1
LinkDB
All DBs
Position
complement(2194763..2195671)
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AA seq
302 aa
AA seq
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MNNTESQTPINSFTLAELIDLAGEQRQGLMRECITASSDSQMQVFRFPCRIDAFIIGVGT
EGETSVSFNLHEFRLKKDSMFIFTPKNILQVNSQQYFKADVIAISPDFMRRINIDIKNMI
PLFLKFVENPTLALTPEESRSMRGMIAQIERETRGPETHFSFDIVSGLIAATIYKVGDIM
YHYLAEHPEGQNNSHNRAEEYFKQFTHLLGEHFREERSVGFYARQLCITPKYLTTLIKRI
SGQSVSEWIDNYVILEAKTLLKYSTMSIQEIAYYLNFPNQSFFGSYFKRNTGMSPSQYKA
QN
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatacagagagccaaacaccgatcaactcatttacgctggccgaacttatagac
ttggccggcgaacaacgtcagggcctgatgcgcgaatgcattacggccagcagcgactcc
caaatgcaggtcttccggttcccgtgccgcatcgacgccttcataatcggagtcggcacc
gaaggggagacctccgtatcgttcaacctgcatgaattccggctgaagaaggattcgatg
ttcatctttaccccgaaaaatatcctgcaggtaaattcgcaacagtatttcaaagccgac
gtcatcgccatatcgcccgacttcatgcgccgcatcaacatcgacatcaaaaacatgata
ccgctgttcctcaaattcgtcgaaaatcccacattggcgctgacgcccgaagagagccgc
tccatgcgcggcatgatcgcccagatcgaacgcgaaacccgcgggccggagacccatttc
tcgttcgatatcgtcagcgggctgatcgccgcaacgatttacaaggtcggggatatcatg
taccactacctcgcggagcatcccgaagggcagaacaattcgcacaaccgcgccgaagag
tacttcaagcaattcacccacctgctgggcgaacacttccgcgaagagcgcagcgtcggg
ttctacgcccgccagctctgcatcacgcccaaatacctcaccacgctcatcaagcgcatc
agcgggcagtcggtttcggagtggatcgacaactatgtgattctggaggccaaaaccctg
ctcaaatactcgacgatgagcatacaggagatcgcctactacctgaacttcccgaaccag
tcgttcttcggcagctacttcaagcgcaacacgggcatgtcgccctcgcagtacaaagcg
caaaactga
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