Acidithiobacillus ferrooxidans ATCC 53993: Lferr_0965
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Entry
Lferr_0965 CDS
T00758
Name
(GenBank) putative transcriptional regulator
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
afe
Acidithiobacillus ferrooxidans ATCC 53993
Pathway
afe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Lferr_0965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afe03400
]
Lferr_0965
Enzymes [BR:
afe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Lferr_0965
DNA repair and recombination proteins [BR:
afe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Lferr_0965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_4
DUF4062
Fic-like_C
PadR
HTH_45
Motif
Other DBs
NCBI-ProteinID:
ACH83211
LinkDB
All DBs
Position
933698..935266
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AA seq
522 aa
AA seq
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MRIFISSVQKEFAAERKALAEYLSGDPLLRRFFETFLFERDVPASDRRPDAVYLDEVRNC
DLYLGLFGDDYGWENKDGLSPTHLELNEATRQGKTRLIFVKGADDDAKHPKMRALIRDAG
DTLVRRRFNSSEELVAAVYASLVRILEERELIRLGPFDATFCRNATLDDLDQDKITRFLG
LARRGRNFLLPEDTPPHEVLTHLNLLDKGRPTHAAILLFAKQPQRFLITSEVKCAHFHGY
EVAKPIPSYQVYKGTVFDLVDQAKDFVLSKIDLWVGTREHGTQAPTKYEIPQEVVAEAIV
NAVVHRDYTSNASVQVMLFKDRLEIWNPGSLPPTLTLEKLRGPHASVPHNPLLAEPMYLT
KYIERMGTGIRDMIHRCRKAGLPEPEIRLDGGSFVLTIRRPASGSATPSGQAKDQGGQLE
SRLGSRLESRLESRLESRLESALAAKVMLAIQPQPLGKAAIAPILGHKTVSGELHKQIKR
MVDGGLIEPTIPEKPSSRLQKYRLTAKGQALLAELEKPGGNA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcttcatcagcagcgtccagaaggaattcgccgccgagcgcaaggcgctggcc
gaatacctatccggcgacccgctgctgcggcgtttctttgagacgtttctcttcgagcgc
gatgtccccgcttccgaccgtcggcccgatgccgtctatctcgatgaagtccggaactgc
gatctctaccttggactctttggagacgactacggctgggaaaacaaggacggcctctcg
cccacccacctcgaattgaacgaggctacccggcagggcaagacccgcctgatcttcgtc
aagggcgcggacgatgatgccaagcacccgaaaatgcgcgccttgatccgcgacgccggg
gacacgcttgtccggcggcgtttcaattcctccgaagaacttgtcgccgccgtctatgcg
agcctggtccggatacttgaagagcgcgagctgatccgtttggggcccttcgatgccacg
ttctgccggaacgccacgctcgacgacctggaccaggacaagatcacccgctttctcggg
ctggcccgccgtgggcgcaatttcctgttgccggaggacacgccgccccatgaggtgctg
acccacctcaacctgctcgacaaggggcggccgacccatgccgccatcctgttgttcgcc
aaacagccgcaacgcttcctgatcacgtccgaggtgaaatgcgcccacttccacggctat
gaagtggccaagcccatcccttcctatcaggtgtacaagggcacggtcttcgacctcgtg
gaccaggccaaggatttcgtgctctccaaaatcgatctctgggtcggcacccgcgagcac
ggcacccaggcgcccacgaaatacgaaatcccgcaggaggttgtcgccgaggccatcgtc
aacgccgtcgtgcatcgcgactacaccagcaacgccagcgtgcaggtaatgctcttcaag
gaccggctggaaatctggaaccccggttccctgccgcccacgctgaccctcgaaaaactg
cgcggcccgcacgcctccgtcccgcacaacccgctgctcgccgagcccatgtatctcacc
aaatacatcgagcgcatgggcaccggcatccgcgacatgatccaccgttgccgcaaggcc
gggcttcccgaacctgaaatccggctggatggcggctccttcgtcctgacgatccgcaga
ccggcctctgggtcggcgaccccgtcgggacaagctaaggaccaaggcggacagctagag
tcacggctagggtcacggctagagtcacggctagagtcacggctagagtcacggctagag
tcggctttggccgccaaggtcatgctggccatccaaccgcagcctctcggcaaagccgcc
attgcgccgatcctcggacacaaaacggtctccggcgaactccacaagcagatcaagcgc
atggtggacggcggcctcatcgagcccaccatccccgaaaaacccagcagtcgcctccag
aaataccggctcaccgccaagggccaggcattgctggcggagttggaaaagccggggggc
aatgcatga
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