KEGG   Acidaminococcus fermentans: Acfer_0466
Entry
Acfer_0466        CDS       T01151                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
afn  Acidaminococcus fermentans
Pathway
afn02024  Quorum sensing
afn03060  Protein export
afn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:afn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Acfer_0466
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Acfer_0466
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Acfer_0466
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:afn02044]
    Acfer_0466
Enzymes [BR:afn01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Acfer_0466
Secretion system [BR:afn02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Acfer_0466
  Eukaryotic Sec-SRP protein
   Acfer_0466
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_17 APS_kinase Zeta_toxin CbiA AAA_22 AAA_30 AAA_16 cobW AAA_31 AAA_28 6PF2K ATP_bind_1 CLP1_P MeaB ATP-synt_ab AAA_33 nSTAND3 MMR_HSR1 AAA_19 YqeC AAA_24 Arf TsaE KAP_NTPase ResIII AAA_18 MobB AAA_14 NTPase_1 Thymidylate_kin AAA
Other DBs
NCBI-ProteinID: ADB46869
UniProt: D2RIG7
LinkDB
Position
549384..550730
AA seq 448 aa
MAFEILTDKLTAAIQKLRGQKTVSEQDLKETLREVRLALLEADVNFKVVKEFTAKIRERA
MGQQVDPNLTPGQYIVKIVHEELIELLGGTQSKLNVAANPPTVIMLVGLQGAGKTTTVGK
LANYLRKNGKKPLMVAGDVYRPAAITQLEVIGKQLDMPVFSMGDQVSPVEIARESLKRAN
ALLCDTVLIDTAGRLHVDETLMNELKDMKTAVNPDEILLVVDAMTGQDAVTVADSFNKAL
GITGLIVTKLDGDARGGAVLSVKAVTNCPVKFVGMGEKLDALQPFYPDRMASRILGMGDV
LSLIEKAQEAIDVDSAKKMAESLKKNEFTLDMFLDQMKQVKKLGSLESILSMIPGMGKFA
KQLEGVDLDGKEVRRLEAIIYSMTPQERQNPRIINGSRRKRIAAGCGQRVQDVNRLLKQF
EESKKLMKTMQGMNKYARKGRFKLPFMQ
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggcttttgaaatcctaactgacaaactgacggcagccatccagaagctccggggacag
aaaaccgtttccgaacaggatctgaaagagaccctgcgggaagtgcggctggctctcctg
gaagccgatgtgaatttcaaggtcgtcaaggaatttaccgcaaagatcagggagcgggcc
atggggcagcaggttgaccccaatctcactcccggccaatatattgtgaaaatcgtccat
gaagagctgatcgagctcctgggcggtacccagagcaagctgaacgtggcggccaatccg
cctacggtcatcatgctggtggggcttcagggcgccggcaagaccaccacggtgggcaaa
ctggccaattacctgagaaagaacgggaaaaagccgctgatggtggccggtgacgtatac
cgtcctgcagccatcacccagctggaagtcattggcaaacagctggatatgccggtcttt
tccatgggggatcaggtctctccggtggaaatcgccagagaatccctgaaacgggccaat
gccctgctgtgcgataccgtgctcatcgataccgccggccgtctccatgtggacgaaacc
ctgatgaatgagctgaaagacatgaaaactgcggtcaacccggatgagatcctgctggtg
gtggatgccatgaccggtcaggacgccgttacggtggccgattccttcaacaaggccctg
ggcatcacagggctgatcgtaaccaaactggacggtgacgcccggggcggtgccgtactc
agtgtgaaggcagtgaccaactgcccggtgaagttcgtggggatgggggaaaaactggat
gctctccagcctttctatcctgaccggatggcttcccggatcctgggtatgggggatgta
ctgtccctgatcgaaaaggcgcaggaagccatcgatgtggactctgccaagaagatggca
gaatccctgaaaaagaatgaattcaccctggatatgttcctggatcagatgaaacaggtc
aagaaactggggtccctggaatccattctcagcatgatccccggcatgggaaaatttgcc
aagcagctggaaggggtggatctggacggcaaggaagtccgtcggctggaagccatcatc
tattccatgacgccccaggaacggcagaatccccgtatcatcaacgggtcccggcgcaag
cgcattgccgccggttgcggtcagcgggtgcaggatgtgaaccggctgctgaagcagttc
gaagagagcaaaaagctcatgaagaccatgcagggcatgaacaagtatgcacggaagggc
agattcaaactgcctttcatgcaataa

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