Archangium gephyra: AA314_06327
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Entry
AA314_06327 CDS
T03948
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
age
Archangium gephyra
Pathway
age03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
age00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AA314_06327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
age03019
]
AA314_06327
03009 Ribosome biogenesis [BR:
age03009
]
AA314_06327
Enzymes [BR:
age01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AA314_06327
Messenger RNA biogenesis [BR:
age03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AA314_06327
Ribosome biogenesis [BR:
age03009
]
Prokaryotic type
rRNA helicases
AA314_06327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
Motif
Other DBs
NCBI-ProteinID:
AKJ04701
LinkDB
All DBs
Position
7958538..7960298
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AA seq
586 aa
AA seq
DB search
MVQARSIVSTPSETIPTFEQLGLGPALVEALSGLGYEEPTPIQRAALPPLLAGKDLLGIA
ATGTGKTAAFSLPLLQNLTPGKLEPFSTSALVLVPTRELAMQVAEAIHRYGQKLGVTVLP
LYGGQPIGQQLRVLKRGVDVIVATPGRALDHLKRQSLLLDSVRTVVLDEADEMLDMGFAE
DLEAILEATPEKHQTALFSATLPPRIASIAERHLHAPVHVRIAKEKMAPGTGPRVRQTAY
IVPRAFKAATLGRVLDVEAPTAAIVFCRTRTEVDELTVSLNGHGWRAQALHGGMDQAQRD
RVLKQFKTHAVDLLIATDVAARGLDIEKLSHVVNYDVPNAPEAYVHRIGRTGRAGREGVA
ITLAEPREHRLLRNIEKLTGQKIEIATVPTVADLRARRLELVRASLREALVAGELDSYRS
VVESLGSEFDLVDVAAAAVKLLHDAEVEGREEAEEDIPTLPPPSEKAPRPGKNARTAARP
GFGERPGPGPKGPRTGDKRRAGPPSGEFDMARLFIGVGRHAGVRPADLVGAIAGEAGVEG
RRIGAIEIGDNYSLVEVPEPLADQIVTALRSATLRGKKVQVRRDKA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
gtggtacaagcccgctccatcgtgagcaccccttccgagaccattccgactttcgaacaa
ctgggcctcgggcccgccctcgtggaggcactcagtggccttggctacgaggagcccacc
cccatccagcgcgccgccctgccccccttgctcgcgggcaaggatctgctcggcatcgcc
gccaccggcaccggaaagacggccgccttctccctgccgctcctgcagaacctcaccccc
ggcaagctcgagcccttctccacctccgcgctcgtgctcgtccccacccgtgagctcgcc
atgcaggtggccgaggccatccaccgctatggccagaagctcggcgtcaccgtgctcccc
ctctacggcggccagcccatcggccagcagctgcgcgtgctcaagcgcggcgtggacgtc
atcgtcgccacccccggccgcgcgttggatcacctcaagcgccagtcgctcctgctcgac
tccgtgcgcaccgtcgtgctcgacgaggccgacgagatgctcgacatgggcttcgccgag
gacctggaggccatcctcgaggccaccccggagaagcaccagaccgccctcttctccgcc
accctgccccctcgcatcgcctccatcgccgagcgccacctgcacgcccccgtccacgtg
cgcatcgccaaggagaagatggcccccggcaccgggccccgcgtgcgccagacggcctac
atcgtcccgcgcgccttcaaggccgccacgctcgggcgcgtgctcgatgtggaggccccc
accgccgccatcgtcttctgccgcacccgcaccgaggtggatgagctcaccgtctccctc
aacggccacggctggcgcgcccaggcgctccatggcggcatggatcaggcccagcgtgac
cgcgtcctcaagcagttcaagacgcacgcggtggatctgctgatcgccaccgacgtggcc
gcgcgcggactggacatcgagaagctgtcccacgtcgtcaactacgacgtacccaacgct
cccgaggcctacgtccaccgcatcggccgcaccggccgcgccgggcgcgagggcgtcgcc
atcaccctcgccgagccgcgcgagcaccggctgctgcgcaacatcgagaagctcaccggc
cagaagatcgagatcgccaccgtgcccaccgtggcggatctgcgcgcccgccggctcgag
ctggtgcgcgcctccctgcgcgaggccctcgtggccggcgagctcgactcctaccgctcc
gtggtggagagcctcggctccgagttcgacctggtggatgtggccgccgccgcggtgaag
ctcctccacgacgcggaggtggagggccgcgaggaggccgaggaggacatccccacgctg
cctccgccctcggagaaggctccccgtccgggcaagaacgcccggaccgcggcccgcccc
ggtttcggcgagcggcccggcccgggtcccaaggggccgcgaacgggtgacaagcggcgc
gcgggtcctccctcgggggagttcgacatggcgcggctgttcatcggcgtgggacggcat
gccggtgtccggcccgcggacctcgtgggcgccatcgccggtgaggccggcgtcgagggg
cggcgcatcggcgccatcgagatcggtgacaactactccctcgtcgaggtgcccgagccc
ctcgccgatcagatcgtcaccgccctgcgctcggccaccctgcgcggcaagaaggtccag
gtccgccgcgacaaggcctga
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