Acidovorax sp. JS42: Ajs_2088
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Entry
Ajs_2088 CDS
T00455
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s)
Organism
ajs
Acidovorax sp. JS42
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
CHASE
PAS_9
PAS_3
PAS
PAS_8
PAS_4
Motif
Other DBs
NCBI-ProteinID:
ABM42264
UniProt:
A0A9J9FV92
LinkDB
All DBs
Position
complement(2206129..2209272)
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AA seq
1047 aa
AA seq
DB search
MPTSHAQRSFPWHWLPGAAVALAGCAASYALYHQQQSSMQAIARVRFEQEARLFAETLQR
RMESHADLLQGMRGLLTVNPQLRRADFERVARELDLRHYHPGVKNINFTRYVPGPRRAAF
EEQARSDPHLDGDLPRDFAIHPQAVLPDYFVVDYLWPQGGNSGVQGLEIHSQPANLEAMR
RARDTGGLVASAPFELHQETEHRTGVIIRMPVFAEPAAGQAGPARFLGAVGVSLRIYDIV
HAVRTAGNMQGLALRMADVGPFNSEEPAPPQSLFESETRVGTSAMEYEQSVRVGGRRWSL
QFQPVVPFLSPQESRLPWLLGSGGLLVTALLTALVSMLVLRRSQALDHAKETDTALRESE
ARLRAVFNQAAVGIAQTDSRTGRLVRMNQKFCDLLGYSAQELQQMRFQDFSEPSDLAADL
EQLQRMLAGELSEYRMEKRYRRKDGSEVWVDLMVSPLRLEGQPEHHLAVVQDISKRKHME
QVLRQSEEPLRNILNHMPVGVNQVQDGKIVFRNDRHVQICGYDIREAPDVDTWWRLVMPD
AHQREHAREAWHAACTAALKNPDGAIRTVECVITAKSGVRRAVELSGMILGDSHIVTMVD
QSQRKAAEEEVRYLAYNDPLTGLPNRRLLLDRLEQALAMSARHQLCGAVMMLDLDNFKTI
NETQGPDMGDRLLREVARRLRDCVPEDETLARHGGDEFVVVLKDLGADPQEAANRAEEMG
QTILAAIRAPFDIDGQQHHTALSVGIAIFRGVRESADELLKRSDLAMYEAKAAGRDTLRF
FDPQMQAAVSERAALEADLRAGLDAGQLELFYQPKVDQGRITGAEALVRWRHPDRGFISP
AEFIPLAEESGLILRVGEWVMRSACAQLAQWSAHPVLGELTVAVNVSPRQFHEGSFVPQV
LEALAASGADARRLRLELTEGMLLQDVEDTIAKMVQLRGYGVGFSLDDFGTGYSSLAYLK
RLPLHELKIDKSFVRDVLTDPNDAVIARTIVALGTSLGLRVVAEGVETEAQRAFLERNGC
HAWQGYLLSPPLQAAAFEALVLKRAGV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgccgacatcccacgcacagcgctcgttcccctggcactggctccccggagcggccgtg
gcgctggccggttgcgcggcaagctacgcgctgtaccaccagcagcaatcctccatgcag
gccatcgcgcgggtgcgtttcgagcaggaggcccggctgtttgccgagacgctgcagcgg
cgcatggagtcccacgcggatttgctgcagggcatgcgcggcctgctgacggtgaatccg
cagctgcggcgcgccgacttcgagcgcgtggcgcgtgagctggatctgcggcattaccac
cccggcgtgaagaacatcaacttcacgcggtacgtgcccggcccccggcgggcggccttc
gaagagcaggcgcgctccgacccgcatctggacggcgacctgccgcgggatttcgccatc
catccgcaggccgtattgccggactatttcgtggtggactacctctggccgcaggggggc
aacagcggcgtgcaagggttggagatccattcccagccagccaacctcgaagccatgcgc
cgtgcgcgcgacaccggcgggctggtcgcctccgcgccgttcgagctgcaccaggaaacc
gagcaccgcacgggcgtcatcatccgcatgccggtgtttgccgagccggcggccggacag
gcggggccggcgcgctttctgggggcggtgggcgtgagcctgcgcatctacgacatcgtg
catgccgtgcgcaccgcgggcaacatgcagggcctggcgctgcgcatggcggacgtgggc
cccttcaacagcgaggagcctgctccgccgcaatccctctttgaatcggagacgcgcgtc
ggcacctctgccatggaatatgagcaaagcgtgcgcgtgggcggaaggcgctggagcctg
cagttccagcccgtcgtgccgttcctctcgccgcaggagtcgcgcctgccctggctgctg
ggctccggcggcctgttggtgaccgcactgctcaccgcgctggtatcgatgctggtgctg
cggcggtcacaggcactggaccatgccaaggagaccgatacggccttgcgcgaaagcgag
gcgcgcctgcgcgccgtgttcaaccaggccgcggtgggcatcgcccagaccgactcgcgc
accggccgcctggtgcgcatgaaccagaagttctgcgacctgttgggctacagcgcgcag
gaactgcagcagatgcgctttcaggacttcagcgagcccagcgacctggccgcggacctg
gagcaactgcagcggatgctggccggtgagctgagcgaataccgcatggaaaagcgctac
cgccgcaaggacggcagcgaggtgtgggtggacctcatggtctcgccgctgcgcctggaa
ggccagcccgaacaccaccttgcggtggtgcaggacatcagcaagcgcaagcacatggag
caggtgctgcgccagagcgaggagcccctgcgcaacatcctgaaccacatgcccgtgggc
gtgaaccaggtgcaggacggcaagatcgtgttccgcaacgaccggcatgtccagatctgc
ggctacgacatacgcgaggcgcccgacgtggacacctggtggcgcctggtaatgcccgac
gcacaccaacgcgagcatgcgcgcgaggcatggcacgccgcatgcacggcggcgctgaag
aaccccgacggtgccatccgtaccgtggaatgcgtgatcaccgccaagtcgggcgtgcgc
cgcgcggtcgagctgtccggcatgatcctgggtgactcgcacatcgtcaccatggtggac
cagagccagcgcaaggcggccgaggaagaggtgcgctacctggcctacaacgatccgctc
accggcctgcccaaccgccgcctgctgctggaccgcctggagcaggcgctggccatgagc
gcccgccaccaactgtgcggcgcggtgatgatgctggacctggacaacttcaagaccatc
aacgagacgcaaggccccgacatgggtgaccgcctgctgcgcgaggtggcccggcggctg
cgcgactgcgtgcccgaggacgaaaccctggcgcgccacggcggcgacgagttcgtcgtg
gtgctcaaggacctgggcgccgacccgcaggaggcagccaaccgcgccgaggagatgggc
cagacgatcctggcggccattcgcgcgcccttcgacatcgacggtcagcagcaccacacg
gcgctcagcgtgggcatcgccatcttccgcggggtgcgcgaatcggcggacgagctgctc
aagcgcagcgaccttgccatgtacgaggccaaggccgccgggcgcgatacgctgcgcttt
ttcgatccacagatgcaggctgccgtgtccgaacgcgcggcgctggaggcggacctgcgc
gccggactggatgcgggacagttagaactgttctaccagcccaaggtggaccagggccgc
atcacgggcgccgaggcgctggtacgctggcgccatccggacaggggcttcatctcgcca
gcggaattcattcccttggcggaagaaagcggactgatcctgcgcgtgggcgagtgggtg
atgcgcagcgcctgcgcacagctggcgcagtggagcgcgcaccccgtgctgggtgagctc
accgtcgcggtgaacgtgagcccgcgccagttccacgagggtagcttcgtgccccaggtg
ctggaggcgctggccgcctcgggcgccgacgcgcgccgcctgcggctggaactgaccgag
ggcatgctgctgcaggacgtggaggacaccatcgccaagatggtgcagttgcgtggctac
ggcgtgggcttctcgctggacgactttggcacgggctactcgtcgctggcctacctcaag
cgcctgcccctgcacgagctgaagatcgacaagagcttcgtgcgcgacgtgctcaccgac
cccaacgatgccgtgatcgcacgcacgatcgtcgccctgggcaccagcctgggcctgcgg
gtggtggccgagggcgttgagaccgaggcgcagcgcgcctttctggagcgcaacggctgc
cacgcctggcagggctatctgctcagcccaccgctgcaggccgcggcgttcgaggccttg
gtgctgaagcgggccggcgtctga
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integrated database retrieval system
