Alteromonas naphthalenivorans: ambt_05860
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Entry
ambt_05860 CDS
T01513
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt00500
Starch and sucrose metabolism
alt01100
Metabolic pathways
alt01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
ambt_05860
Enzymes [BR:
alt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
ambt_05860
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
AEF02709
UniProt:
F5ZBB6
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All DBs
Position
1346816..1348903
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AA seq
695 aa
AA seq
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MDAKQNVTKVNHVLLGEAFPLGATPYDDGCNFAVYAPDAKAVALCLFHNDTEEPIEEILL
PEKSGDIWHGFFPNVKAGHLYGYRVERGEGQLHGVPTDKLLIDPYAKKLSRPIHWDARQY
KFDSQFMVPKCVVVADADYPESVIRKVEIPKHKRIVYEAHVKGLTKLHPDVPKEHRGKYL
GASHPAVIAHLKALGITTVQFMPMCSFMPEPYITEKGLTNYWGYNPVNFFAPEPRYASKD
ALAEIKHMVDEYHKAGLEVIVDVVYNHTAEGGKGGPILSYKGFCPYQAYLLEQTKRGELV
YSNHSGCGNTVHTSHPYMMTLILDAMRFWATTIGVDGFRFDLAVTLGREPQAYNKYAGLI
RAIGQDPVLKQTVLLAEPWDIGLGGYQVGNFPTPWLEVNDKYRDTARAFWRGDEGLAADF
ATRFMGSRDLFHKGYRHISTSVNNITYHDGFTLHDLVSYADRHNLANLEENRDGHGHNLS
ANYGVEGETQDKNILALRERQKRNLFATLIFSQGTPHILGGDELSRTQNGNNNAYCQDNP
ISWTQWEMNKRQQDFLSFCQYVIRLKQGSTLLSEIKLEDDHYSLSKNVSQINWFKPDGTD
KASEDWNAAHNKAFGVEIRGCAVGEQTPEHWFMCVNASDNDVRFNLPSLSPKGGWTLHLD
TRYASLSEQPKICIQKVFLQAGKSLTLFSFNEFTS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
ttggacgcgaaacagaacgtcacaaaggtaaaccatgttttattaggtgaagcgtttcca
ttaggtgctacgccttatgatgatgggtgcaacttcgctgtttatgcgccagatgcgaaa
gcggtggcgttatgtctctttcacaacgataccgaagaacctatagaagaaatattgctg
cctgaaaaaagcggcgatatttggcatggtttctttcccaatgtaaaagcaggtcattta
tatggctatcgagtggagcgcggcgaagggcaactgcacggtgtgcccaccgataaattg
cttatcgacccttatgcaaaaaaactaagcagacccattcattgggatgctaggcagtat
aaattcgactcgcaatttatggtgcctaagtgtgtggtggtggcagacgccgattaccct
gaaagtgttattcgcaaggtcgagatcccaaaacacaaacgtattgtttatgaagcgcat
gtgaaagggttaacaaagttacaccccgatgtgccaaaagaacacagaggtaagtacctt
ggggcaagccaccccgcggttattgcccacctaaaagcgctaggtattaccacggttcag
ttcatgccaatgtgctcctttatgccagagccttacattacggaaaaagggttaacgaat
tactggggctataacccagttaactttttcgcgccggaacctcgttatgccagcaaagat
gctttggccgaaattaagcatatggttgatgaataccataaagcggggcttgaggtgatt
gtagatgtggtttacaaccacacggcagagggcggtaaaggcggccctattttgtcatac
aaaggtttctgcccatatcaagcgtatctgttagagcaaactaagcggggagagttggtt
tattctaatcactctggatgcggtaacactgtgcatacgtctcatccttacatgatgacc
ctcattttagacgccatgcgtttttgggcaaccactattggtgtagatggttttcgtttc
gacttagcggtaacccttggacgagagccacaagcttataataaatatgctgggctaatt
cgcgccatcgggcaagaccccgtattaaagcaaaccgttttactagccgagccctgggac
attgggcttggtggctatcaggtgggtaacttccccacgccatggctagaagtgaacgat
aagtaccgagacacggcacgtgcgttttggcgcggtgatgaaggcttagcagccgatttt
gctactcgctttatgggttctcgcgacctatttcataaaggctaccggcatatttccaca
tcggtgaataacatcacctaccacgatggttttaccctacatgatttagtgagttatgcc
gatcgccataacctagctaacctagaagaaaatcgtgatggtcacgggcataacttatca
gctaactatggcgttgaaggtgaaacccaagataaaaatatattggcactacgtgaacgc
cagaagcgtaatttatttgccacgcttattttctcacaaggcacgccacatattttaggg
ggcgacgaactaagtcgcacgcaaaacggtaacaacaacgcctattgtcaagataatcca
attagttggacgcagtgggaaatgaacaagcgtcagcaagatttccttagcttttgccag
tatgttattcgcctaaaacaaggttctaccttgttaagcgagataaagctagaagacgac
cattactcgttatcgaaaaatgtcagccaaattaactggttcaaacctgatggcaccgat
aaagcctctgaagattggaacgcggcacacaataaagcttttggtgttgaaattagaggg
tgcgcggtaggtgaacaaaccccagagcattggtttatgtgtgtaaacgccagcgacaac
gacgtgaggtttaatctacctagtttgtcaccgaaaggcggctggactttgcatttagat
actcgctacgcttcactcagcgagcaacccaaaatctgtattcaaaaagtatttttacaa
gcgggtaagtctcttactctgtttagttttaacgaatttacctcgtaa
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