Alteromonas naphthalenivorans: ambt_09560
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Entry
ambt_09560 CDS
T01513
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt00550
Peptidoglycan biosynthesis
alt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ambt_09560
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alt01002
]
ambt_09560
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
alt01011
]
ambt_09560
Enzymes [BR:
alt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ambt_09560
Peptidases and inhibitors [BR:
alt01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
ambt_09560
Peptidoglycan biosynthesis and degradation proteins [BR:
alt01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
ambt_09560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AEF03438
UniProt:
F5Z8P5
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All DBs
Position
2143628..2144812
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AA seq
394 aa
AA seq
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MLRIIQRAKPSFLSFAFMLFSALVLSANAAVVTPPAPSVAAEGFLLTDFETGHVIASKNA
DMQLAPASLTKIMTIYVIGKELQAGNISLSDEVTISENAWAKKFPDSSKMFIEVGTQVSV
SDLLRGIVVQSGNDACVAMAEHVAGSQAAFASMMNAHAQAIGMTSSNFVNAHGLHDPDHY
TTPRDMAVLSRALIAETPEMYKIYSEKEFTFNGIKQYNRNSLLWDKSLNVDGIKTGHTSD
AGYSLITSASQGDMRLISVVMGTDSERARKVENKKLLKYGFRFYETLTPYHAGDSFVAHR
IYMGDRETVDLGINQSTPITIPRGQAANLEANFELDKKLEAPLAKGQVVGTLFLQLEGED
VASYPLVTLQEVKEGSMFNRIKDYIMLQLGFDEA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgctcagaataattcaacgcgctaaaccgtcctttctctccttcgcttttatgcttttc
agtgcactagtactgtcagcgaatgcagcagtggttactccaccagctccatcggtagcg
gcggaaggctttcttttaaccgactttgaaaccggacacgtaatcgcgtcgaaaaacgca
gacatgcaattggcacccgccagcttgactaaaatcatgaccatttatgtgattggaaaa
gaattgcaagccggtaacattagcctttcagacgaagtgaccatttctgaaaatgcgtgg
gctaaaaaattcccagattcatcaaagatgtttatcgaagtgggaacgcaagtatcggta
agcgatttattacgcggtattgtagtgcaatcaggtaacgatgcgtgtgttgccatggca
gagcacgttgccggttcacaggcggcgtttgccagcatgatgaatgcgcatgcacaagct
attggtatgacatcgtctaactttgttaatgcccacggcctgcacgacccagatcactac
actacccctcgtgatatggctgtgctgtctcgtgcgcttattgctgaaactcctgaaatg
tacaaaatttacagcgaaaaagaatttacatttaatggcatcaagcaatataaccgtaac
agcctattatgggacaaaagcttaaacgttgatggcattaaaactggccatacgtcagac
gcgggttacagccttattacttctgcctcacaaggcgacatgcgcttaatctctgtagtt
atgggtacagatagtgaaagagcccgtaaggttgaaaacaagaagctacttaaatatggt
tttcgcttttatgaaacgctaacgccttaccacgctggcgatagttttgtagcacaccgc
atttatatgggcgatagagaaaccgtagaccttggaattaaccaatctacccccattacc
attccacgcggccaggcggctaacttggaagccaattttgaactagataaaaaactagaa
gcgccactggctaaaggccaagttgtcggcacacttttccttcaactcgaaggcgaagat
gtagccagctacccccttgtcactttgcaagaagtgaaagaaggcagcatgtttaaccgc
attaaagattacattatgctgcaactgggcttcgacgaagcgtaa
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