KEGG   Alteromonas naphthalenivorans: ambt_14835Help
Entry
ambt_14835        CDS       T01513                                 

Definition
(GenBank) DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
alt  Alteromonas naphthalenivorans
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:alt00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    ambt_14835
   03410 Base excision repair
    ambt_14835
   03420 Nucleotide excision repair
    ambt_14835
   03430 Mismatch repair
    ambt_14835
Enzymes [BR:alt01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ambt_14835
    6.5.1.6  DNA ligase (ATP or NAD+)
     ambt_14835
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     ambt_14835
DNA replication proteins [BR:alt03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    ambt_14835
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     ambt_14835
DNA repair and recombination proteins [BR:alt03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     ambt_14835
   NER (nucleotide excision repair)
    Other NER factors
     ambt_14835
   MMR (mismatch exicision repair)
    Other MMR factors
     ambt_14835
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(3346384..3347400)
Genome map
AA seq 338 aa AA seqDB search
MNIKYVISILLLAISQPTVSFATPVATPVATPVTYLTSDTTEPMSDFAKPISDAAKPMAN
VAKPLFSPIKPVTEQGVMPIQLAATYNKSDYINIAEYLVSEKLDGVRARWTGTQLLTRNG
NKIHAPEWFTKNWPDVALDGELWTQRSSFEAIASIVLSHTPDERWRTVKMMLFDMPVSHV
PFATRLSTMEALVKQANSNSLTTIPQFTLDSQRLLEAKIDEVTAKGGEGLMLHHKAAFYQ
DGRSNQLLKAKRFNDAEAKVVGYVKGKGKFAGMMGSLMVETPEGVQFKIGTGFSMKQRRY
PPPMNSWITFKYFGVTKKGIPRFASFRHVRPDKDLPDL
NT seq 1017 nt NT seq  +upstreamnt  +downstreamnt
atgaatattaaatatgttatctcgatactactacttgcgataagccagcctacagtttca
tttgccacacccgttgcgacacccgttgccacccccgtcacttacctaacgtctgacaca
actgaaccgatgtctgactttgctaagccaatttctgatgctgctaagccgatggctaat
gtcgccaagccgttgtttagccctattaaacccgtgacagagcagggtgtaatgcctatc
caattggcagcgacctacaataagagtgactacatcaatattgctgagtatttggttagc
gaaaagttagatggcgtgcgtgcccgctggacgggtacgcagcttcttacccgcaacggt
aataaaattcacgcacctgagtggtttaccaagaactggcctgatgtagcccttgatgga
gagctatggactcagcgaagcagttttgaagctatcgcttctattgtgcttagtcatacg
cctgatgaacgctggaggacggtgaagatgatgctgtttgatatgcccgtcagtcatgtc
ccgtttgccacacgcttgtctacgatggaggcactggtaaagcaagcaaatagcaatagt
ttaactactatcccccagtttacgttggattctcagcggcttcttgaagcgaaaatagat
gaggtcactgcgaagggcggtgaaggcctaatgctacatcacaaagctgctttttatcag
gacggacgcagtaatcaattattaaaagcgaaacggttcaacgatgctgaagccaaagtg
gttggctatgtaaaaggtaaaggaaagttcgccggcatgatgggctcgcttatggtcgag
acgcccgaaggggtacaatttaaaatcggcacggggtttagtatgaaacagcgccgatat
ccgcctccaatgaacagttggatcaccttcaaatactttggcgtaacaaagaaggggatc
ccccgatttgcaagctttaggcatgtacgcccagacaaagaccttcccgatttataa

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