Alteromonas mediterranea DE1: amad1_15070
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Entry
amad1_15070 CDS
T02340
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa00540
Lipopolysaccharide biosynthesis
amaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
amad1_15070 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
amaa01005
]
amad1_15070 (lpxC)
Enzymes [BR:
amaa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
amad1_15070 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
amaa01005
]
Lipid A
amad1_15070 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AFV86510
LinkDB
All DBs
Position
complement(3396598..3397509)
Genome browser
AA seq
303 aa
AA seq
DB search
MIRQRTIKQSVQETGIGLHKGEKVTMTLRPAPANTGIVFRRVDLEPHVDIPSRANAVGNT
MLCTCLNNEDGVTIQTVEHLASALAGLGIDNIIVEVDSNELPIMDGSASPFVFLLQSAGI
EELNAPKQFIRIKKPVRVEDGDKWAELVPYDGFRVDFQIDFDHPVISQTRQHMVMDFDSC
SYVNEVSRARTFGFMSDLEYMNANNLALGGSMENAVALDEFRVLNPEGLRYDDEFLKHKI
LDAIGDLYLGGHSLIGELRAYKTGHGLNNKLLNAVLAQKECWEFVTYDSQESAPIRYAQP
VLA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgattagacaacgtacaatcaagcaatcggtacaagagaccggaattgggcttcataaa
ggggaaaaggtcacaatgactctccgacctgcgccagcaaacacgggtatcgtgtttagg
cgtgttgaccttgaaccacatgttgacataccttcgcgtgcgaacgcggtaggtaatacc
atgctgtgtacgtgtttaaataatgaagacggtgtaactatccaaacggtagagcactta
gcgtctgcgttagcgggtttaggtatcgacaatattattgttgaagtagacagtaacgag
ctgccaattatggacggaagtgctagcccgttcgtatttttacttcaatctgcaggtatt
gaagagctaaacgcgcctaagcaatttattcgtattaaaaagcctgttcgcgtagaagat
ggcgacaagtgggccgaattggtaccttatgatggcttccgcgttgatttccaaattgac
ttcgaccacccggtgatcagtcaaactcgtcaacacatggtcatggacttcgattcatgt
tcttatgtgaacgaagtaagtcgcgcgcgtaccttcggttttatgagcgatttagagtat
atgaatgctaacaacctagcgttaggtggtagcatggaaaacgcagtggcgctagacgaa
ttccgcgtgcttaaccctgaagggttgcgttacgatgatgaattcttgaagcacaaaata
ttggacgccattggtgatttataccttggcggacacagcttgattggtgaattgcgtgca
tataaaacgggccacggcctgaataacaaactgcttaatgcagtgttagcgcaaaaagag
tgctgggagttcgtgacttacgactcgcaggaatcagcaccaattcgttatgctcaaccc
gtgttagcgtaa
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