Alteromonas macleodii ATCC 27126: MASE_12785
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Entry
MASE_12785 CDS
T02246
Name
(GenBank) exonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
amac
Alteromonas macleodii ATCC 27126
Pathway
amac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MASE_12785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amac03400
]
MASE_12785
Enzymes [BR:
amac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MASE_12785
DNA repair and recombination proteins [BR:
amac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MASE_12785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
LNP1
Prominin
Motif
Other DBs
NCBI-ProteinID:
AFS38071
LinkDB
All DBs
Position
2976685..2978049
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AA seq
454 aa
AA seq
DB search
MIFFMFTNSPSTSRQILTVTKLNRLARTVLEGEIGLIWLSAEISNFVAAASGHWYFTLKD
NKAQVRAAMFKGSNRNVRIRPKEGDKILVRASVGLYEARGDYQLVVEHMESDGEGALKQA
FEALKFKLNNEGLFDTANKRALPERINRIGVITSSSGAALHDVLSVLKRRSPQTEIIVYP
SMVQGETAPLQLINALRTANHRAEVDVLLLTRGGGSLEDLWCFNDESLAREVAASALPIV
SAVGHEVDFTISDFVADVRAPTPSAAAEILSQDSAALYQTLSQQKQRLARAIHQYLQTSK
QQLVLKKQRLNALHPQSRIQSQWQTLDRLQLRLAHKMQNDLAKAEKRLQGLDYRLNKQSP
SANVARAKDKLNYASTKLLSSMNTLIRSKKNELGGKVSLLQSVSPLSTLARGYSITLSDK
AAINSVNKVNVGDEIKSRVTDGEITSTVTHIQRQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgattttttttatgtttacaaattcgccatctacgtctcgacaaattttaacagttacc
aagctaaatcgcttagccagaaccgtactggaaggcgaaattggccttatttggctatct
gccgaaatatccaactttgtggcagccgcatcagggcattggtatttcacgctcaaagac
aacaaagcccaagttcgcgcggccatgtttaagggatcaaaccgcaatgttcgtattcgc
cctaaagaaggcgacaaaattttagtgcgagcgtcggttggcctttacgaagcacgcggc
gactatcaactggttgtcgaacacatggaaagcgatggcgaaggtgcgcttaagcaagcg
ttcgaagccttaaagttcaaactcaacaatgaaggcttgttcgatactgctaacaagcgt
gcgctacctgaacgtatcaatcgcatcggcgtaataacttcatcaagcggtgcagcgctt
cacgatgtattaagtgtattaaaacgacgcagcccacaaaccgaaatcattgtttatccg
tcgatggttcagggtgaaactgcacctttacagttaattaatgcgttgagaacggctaac
caccgcgcagaagtggatgtgctgttacttacgcgaggcggcggttcattagaagacttg
tggtgttttaatgatgaaagcttagcaagagaagtcgctgcaagtgcccttccaatagtt
agcgccgtaggccatgaggtagacttcaccattagtgacttcgtcgccgatgttcgcgcc
cctaccccatctgctgctgccgaaatcttaagtcaggattctgccgctctttaccaaacg
ctaagtcagcaaaaacaacgcttagcaagggcaatacatcagtaccttcaaacgagtaaa
caacagcttgttttaaagaaacaacggctaaatgcgttgcatccacaaagccgcatccaa
tcgcagtggcaaacgttagacagactacaacttcgtttagcgcataagatgcaaaacgac
ttggcaaaagcagagaagcgattacaaggtcttgattacaggctaaacaaacaatcgcca
tcagcaaacgtggcgcgtgcaaaagacaaattaaactatgctagcaccaagctcttatca
agcatgaacacacttattagaagcaaaaaaaatgaacttggtggtaaagttagcctctta
caatccgtaagtcctctttcaacgctcgcccgtggttacagcattactttgtccgacaaa
gcagccattaatagcgtgaataaagtaaatgtaggtgatgagataaaatctcgggtgact
gacggagaaataaccagtacagtgacacacattcaacggcaatag
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