KEGG   Alteromonas mediterranea UM4b: I636_15300
Entry
I636_15300        CDS       T02723                                 
Name
(GenBank) signal peptide prediction
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
amad  Alteromonas mediterranea UM4b
Pathway
amad02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:amad00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    I636_15300
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:amad02000]
    I636_15300
Transporters [BR:amad02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    I636_15300
SSDB
Motif
Pfam: SBP_bac_8 SBP_bac_6 TAT_signal
Other DBs
NCBI-ProteinID: AGQ02896
LinkDB
Position
3440802..3442085
AA seq 427 aa
MPEKSNSENSASLGRRTLLKGGLALGLTAGVTPFAIGKAKPTLRVMGTHVTLQEAIRQRA
MEDLGINIVFEPGGSAAVLQKASMIPTSFDLYEQWSNSINVLWRARAIQPIEKKRLQYWE
EINDLSKTGKLTRNARMGAGDAPHKILNVQDDGTLGENHTDGISFLPYVHNVDSFGYDTS
NLPTELQGQKESWGWLLDSRYSGKVGIVNDPTIGLFDLALAAQAKGFMQFQDIGAMTEYE
LDDLFNLLIELTQLNHFNGFWTSVPESVEFMKSGRVAIESMFSPAVSALNGQDIPVTFAA
PKEGYRGWHGVMCLSSATNGRMKDVAYEYMNWWLSGWPGAFIARQGYYISNPQRSAKYLS
QAEWNYWYEGKVASEALKGTDGKISVKKGAQRTGGSYESRLSNVAVWNTVMPTYEYSLQK
WYEFITA
NT seq 1284 nt   +upstreamnt  +downstreamnt
atgcctgaaaaatccaatagcgaaaacagcgcctctcttggtcgccgaaccttattgaaa
ggcggtcttgccttaggtttaacggcaggcgttacgccatttgccatcggcaaagcgaaa
cccaccttgcgggtaatgggtactcacgtaactcttcaagaggctattcgccagcgcgct
atggaagacttaggtatcaacatagtgttcgaacccggaggcagtgctgccgtcctacaa
aaagcctccatgatcccaacgtcatttgatttatatgagcagtggtctaatagcataaac
gtattatggcgagcccgtgccattcagccaattgaaaaaaagcgtcttcaatattgggaa
gaaattaacgatttaagtaaaaccggaaaactaacccgaaatgcgcgcatgggagcaggc
gatgcgccacataaaatattaaacgttcaagatgatggcacgttaggcgaaaaccacact
gatggcataagctttctaccctacgttcacaatgtagactctttcggctacgatacgtcg
aatctccctaccgaacttcaaggtcaaaaagaaagctgggggtggttactagacagccgc
tactctggcaaagtaggcattgtaaacgacccaaccattggcttgttcgacttggcgtta
gcagcccaagctaaaggcttcatgcagtttcaagatataggagctatgactgaatacgag
ctcgatgacttatttaatctccttatcgagctaacccagttaaaccactttaatggcttt
tggacatcggtgcccgaatctgtagaatttatgaaaagtggtcgtgttgccatagaaagt
atgttctcgcccgcagtatctgcactaaacggtcaagatatccccgttacattcgcggca
ccgaaagaagggtaccgcggctggcacggcgtaatgtgtttatcctcggcaacgaatggc
agaatgaaagatgttgcgtatgaatacatgaactggtggctttctggctggccaggcgcg
tttatcgccagacagggctactacatctcaaatccacagcgctctgcgaaatatttatca
caggcagagtggaactattggtacgaaggaaaggttgcctcggaagcgttaaaaggaacc
gatggcaagataagcgttaaaaagggagcacagcgaacggggggcagctatgaatcgcga
ctcagtaacgttgcggtttggaatacggttatgccaacctatgaatatagcttgcagaag
tggtacgagtttattaccgcttaa

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