Alteromonas mediterranea UM4b: I636_15300
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Entry
I636_15300 CDS
T02723
Name
(GenBank) signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I636_15300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amad02000
]
I636_15300
Transporters [BR:
amad02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
I636_15300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AGQ02896
LinkDB
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Position
3440802..3442085
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AA seq
427 aa
AA seq
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MPEKSNSENSASLGRRTLLKGGLALGLTAGVTPFAIGKAKPTLRVMGTHVTLQEAIRQRA
MEDLGINIVFEPGGSAAVLQKASMIPTSFDLYEQWSNSINVLWRARAIQPIEKKRLQYWE
EINDLSKTGKLTRNARMGAGDAPHKILNVQDDGTLGENHTDGISFLPYVHNVDSFGYDTS
NLPTELQGQKESWGWLLDSRYSGKVGIVNDPTIGLFDLALAAQAKGFMQFQDIGAMTEYE
LDDLFNLLIELTQLNHFNGFWTSVPESVEFMKSGRVAIESMFSPAVSALNGQDIPVTFAA
PKEGYRGWHGVMCLSSATNGRMKDVAYEYMNWWLSGWPGAFIARQGYYISNPQRSAKYLS
QAEWNYWYEGKVASEALKGTDGKISVKKGAQRTGGSYESRLSNVAVWNTVMPTYEYSLQK
WYEFITA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaaatccaatagcgaaaacagcgcctctcttggtcgccgaaccttattgaaa
ggcggtcttgccttaggtttaacggcaggcgttacgccatttgccatcggcaaagcgaaa
cccaccttgcgggtaatgggtactcacgtaactcttcaagaggctattcgccagcgcgct
atggaagacttaggtatcaacatagtgttcgaacccggaggcagtgctgccgtcctacaa
aaagcctccatgatcccaacgtcatttgatttatatgagcagtggtctaatagcataaac
gtattatggcgagcccgtgccattcagccaattgaaaaaaagcgtcttcaatattgggaa
gaaattaacgatttaagtaaaaccggaaaactaacccgaaatgcgcgcatgggagcaggc
gatgcgccacataaaatattaaacgttcaagatgatggcacgttaggcgaaaaccacact
gatggcataagctttctaccctacgttcacaatgtagactctttcggctacgatacgtcg
aatctccctaccgaacttcaaggtcaaaaagaaagctgggggtggttactagacagccgc
tactctggcaaagtaggcattgtaaacgacccaaccattggcttgttcgacttggcgtta
gcagcccaagctaaaggcttcatgcagtttcaagatataggagctatgactgaatacgag
ctcgatgacttatttaatctccttatcgagctaacccagttaaaccactttaatggcttt
tggacatcggtgcccgaatctgtagaatttatgaaaagtggtcgtgttgccatagaaagt
atgttctcgcccgcagtatctgcactaaacggtcaagatatccccgttacattcgcggca
ccgaaagaagggtaccgcggctggcacggcgtaatgtgtttatcctcggcaacgaatggc
agaatgaaagatgttgcgtatgaatacatgaactggtggctttctggctggccaggcgcg
tttatcgccagacagggctactacatctcaaatccacagcgctctgcgaaatatttatca
caggcagagtggaactattggtacgaaggaaaggttgcctcggaagcgttaaaaggaacc
gatggcaagataagcgttaaaaagggagcacagcgaacggggggcagctatgaatcgcga
ctcagtaacgttgcggtttggaatacggttatgccaacctatgaatatagcttgcagaag
tggtacgagtttattaccgcttaa
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