Alteromonas mediterranea MED64: I533_02040
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Entry
I533_02040 CDS
T02958
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
amag
Alteromonas mediterranea MED64
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
I533_02040
Enzymes [BR:
amag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
I533_02040
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Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
AAA_19
Helicase_RecD
HA2_N
Motif
Other DBs
NCBI-ProteinID:
AGP80403
LinkDB
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Position
446452..449190
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AA seq
912 aa
AA seq
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MIKSGTLYPLTYNTFIPFMLQPFSHLPAYELVTPLKESVAANNIIIGAPPGAGKSTVLPL
SLLQSSLKGKILLMQPRRVVVRNLADYLAKQLNESVGETVGYRIKGESKTSPATRLEIIT
EGVLTRMIQQDPELADVTAIVFDEFHERSIHSDFGLALALEVQTGLRDDLRLIVMSATLD
IAPLQAVLNEFSALPVVNLNTQGRVFPVDIRYTRDVQAYELVPKTCNIIKQAVSEHDGDI
LVFLPGRGSINAVAREIKGLAESADIAIHMLYGALSKSAQQDAIAPDPHGRRKVILSTNI
AETSLTIEGVTVVIDSLWENSAQYHPSSDITALTQQRISQASATQRAGRAGRVMAGTCYR
LCSKSSFERLAKHNAAQIEKEDLSSFLLDTYAWGSTPDTLALLTKPTPAQLNSAQQKLHR
LHAVGFDDATGQGSITPYGRQVAQLPCQPHLAHLLLTVKSGIEGLSPKENNALKHAAVFV
VALSESNMSASGATSVVDALLQVSGNARNQLIQQASRYVRYVTSSTEREQSFKADINALE
EWALGLCIAIAFPLQVGYLRVRATSGNNASGSGACSKNATAGVKQSSQLLEYKLASGKGA
ELATSNSSAFNHGDADDSSPWLAVLEGQLIKNTVVIRLAQAVPESYLRLAFPKAFSEKRS
AVLNRDTGQMEARRSTGFFAITLNSVPVSGQEKIRDNEYWDGAVTEGWFAYLDALPLSQW
PLCDADWQWWRRVALAGKLNLPQDKAFDKPDAWPASLSELVHKAKESLSAALKSCKNIKS
LQQLPWKTALNNGLSWPQQDALATHLPTHVSIPTGREAALDYRESGDVVLAVKMPEMYSQ
NGPLTIAGGRVTVVCELLSPAGRPLQTTSDLGAFWQGSYKEIQKEMKGRYPKHYWPDDPA
NAVPTSKTKKRM
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaaatcaggtacactatacccattaacttataacacctttattccctttatgtta
cagccgttttctcatttacctgcttatgagcttgttacaccgcttaaagagtcggttgcc
gctaacaatatcattattggcgcgccaccgggcgcgggaaagtctaccgtacttcctttg
tcactgctgcaatcatcacttaagggtaaaatattgcttatgcagccacgtcgcgtggtg
gtgagaaacctcgctgactatttagctaagcagttaaacgaaagtgtgggtgaaacggtg
gggtatcgtattaaaggcgaatcaaaaacatcgccagccactcgccttgagattattaca
gaaggtgtgctgactcgcatgattcagcaagacccagagctagcagatgtcactgctatt
gtcttcgatgaatttcacgaacgcagcattcacagcgattttggtttggcgctagcgctt
gaggttcaaactgggcttcgcgacgacctgcgcttaattgtgatgtcggctaccttggat
atagcgccacttcaagcagtgcttaatgaatttagcgcgctgcccgtggtgaacttaaat
acacaaggacgcgtgtttcccgtggatattcgctacacccgagatgtgcaggcttacgag
ttagtaccgaaaacttgcaatatcataaagcaagcagtaagcgaacacgatggcgatatc
ttggtatttcttcctggtcgggggagcataaatgctgttgccagagaaataaaagggtta
gctgagagtgcggacattgctattcacatgctttatggcgcactaagcaagtctgcgcag
caagacgctatagccccagacccccacgggcgaaggaaagttatcctctctactaatatt
gctgaaaccagtttaaccattgaaggcgtgacagtagttattgatagtctgtgggagaac
agtgcgcaatatcacccttcaagcgatattactgcgctcacccagcaacgtatttcgcaa
gcttctgccactcaaagagcagggcgagcagggcgggtaatggcgggtacctgctatagg
ctatgcagtaaaagcagcttcgagcgattagccaaacacaatgcggcgcaaatagaaaaa
gaagatttaagtagctttctacttgatacgtatgcgtggggcagtacgcccgatacatta
gcacttttaaccaagcccacacctgctcaactaaactcggcacagcaaaagctccaccga
ttacatgcagtagggtttgatgacgcaacagggcaagggagcataacgccctacggacgt
caggtagcgcaattgccatgtcagccgcatttagcccatttgctgttaacagtgaagtca
ggtattgaaggcctttcacctaaagaaaataacgcgttaaaacatgccgcagtatttgtg
gtggcgttaagtgaaagcaatatgagtgcaagtggggcaacaagtgtagtggacgctttg
cttcaggtcagtggcaatgcgcgtaatcagttgattcagcaagcctctcgctacgttcgg
tatgtaactagctctacagaacgcgagcaatcgtttaaggctgatattaacgcgctagaa
gaatgggctcttggtttgtgtatagctatagcattcccactgcaggtgggctatttgcgt
gtacgcgcgacgtcaggcaataatgcctcgggcagcggagcctgtagtaaaaatgcgacg
gcaggcgtaaaacagtcatcacaattgcttgagtataagcttgccagcgggaaaggcgcc
gagcttgctacttctaatagcagtgcatttaatcatggcgatgccgatgacagttcgccg
tggttagcggtacttgaagggcaacttataaaaaatacggtagtgatacggctagcgcaa
gctgtgcccgaaagttacttgcgcttagctttccccaaagcatttagtgaaaaacgaagc
gcagtgcttaatcgcgacaccggtcagatggaagcgcgccgaagcacaggtttttttgct
atcacattaaatagtgtgccggtctcagggcaagagaaaatccgcgataatgaatactgg
gatggggcggtaaccgaaggatggtttgcctacctagatgcactgccactttcacagtgg
cccctttgcgacgctgactggcagtggtggcgaagagtggcattggctggcaagctaaat
ctaccgcaagacaaagcgtttgataagccagatgcgtggcctgcatcgttgagcgagctg
gtacacaaggcaaaagagagcttaagcgcagcgctaaaaagctgcaaaaacataaagtcg
ctacagcagctgccgtggaaaacggcgctgaacaatggactttcttggccacagcaagac
gccttagcaacacatcttcccacccacgtgtctattcctacggggcgagaagccgcactg
gactatcgtgaaagcggtgatgtggtgctggcggttaaaatgccagaaatgtactcgcaa
aatgggccgctaacgatagctggaggccgcgttaccgtggtgtgcgagttgttgtcgcca
gcgggaaggccactgcaaactaccagtgatttaggcgctttttggcaaggtagttacaaa
gaaatacaaaaagaaatgaagggccgttaccccaagcattattggccagatgaccccgcc
aacgcggtacctacaagtaaaaccaaaaagcgtatgtaa
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