KEGG   Apis mellifera (honey bee): 408552
Entry
408552            CDS       T01057                                 
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
ame  Apis mellifera (honey bee)
Pathway
ame04512  ECM-receptor interaction
ame04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ame00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    408552
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    408552
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ame04147]
    408552
   00536 Glycosaminoglycan binding proteins [BR:ame00536]
    408552
Exosome [BR:ame04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   408552
Glycosaminoglycan binding proteins [BR:ame00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   408552
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 408552
NCBI-ProteinID: XP_392097
BEEBASE: GB45968
UniProt: A0A7M7R5C5
LinkDB
Position
LG16:complement(6976010..6992150)
AA seq 1929 aa
MTRLGLRFVASAVFLAGIASGQYNHTSWSYNPPPVVPLGRGDIGKPNNTDDDYNISPRWK
TFVTNNEGSDEADRRYLSNQGPTDDDRYDYGQRTDDSGGGYHTNYAGFDQGSYNQGREQI
PLDPYNQESGDTYGRSRGYEDSYGREGEGSRGSYGSGYRETYGSRDDYGRVADPYDQRGY
SQRGGGGYGAAGDSDTYPSSYTVVPVPGQIPPRNCTGSACCVPKCFAEKGSRGPPGILGP
QGPKGQRGFPGAEGLLGPKGDKGEPGPQGPRGTKGDRGKMGIPGFTGIAGVPGVQGPPGA
PGIPGRDGCNGTDGEPGARGYPGEVGPRGFRGPPGLKGQKGQPGFAGRFPVGQKGEPGID
GVRGPPGPPGPQGEHGFPGSKGERGPPGPIGLQGQKGEKGNMGLAFEGPKGDKGQKGEIG
PPGTPGPLEPFQGMREEVIAPQGDRGEKGDKGEMGPDGFKGEPGPIGDQGISGSPGMKGE
KGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLPGRPGQKGEPGRDGPMGVPGLRGP
PGPPGGGKGTPGPPGPKGPRGFPGPTGPRGADGYPGDPGPRGPIGPAGGPGSQGIPGPEG
LPGEKGAKGEPGITGFPGPTGPRGFDGPPGLPGPRGLPGEKGASLVGPKGMDGAPGLDGE
KGQKGERGYAGPRGVPGDVDGIPGPPGEAGLPGERGTPGKDGTPGFSGAPGEKGDAGFCL
PPPPVFPGPKGDRGLDGTPGLPGPRGPPGERGFPGEPGADGLPGPIGPPGLPGKDGIPGA
AGPQGEPGTPAVITSNMIKTEKGDKGVRGEVGRPGPPGPQGPVGEKGAIGFAGFPGPKGT
AGDRGFPGQDGVPGRPGIPGRKGERGLSVKGEPGEPGRSGQIGLKGEPGSYGQKGEPGQC
PPLDLINSKGDRGAPGEKGEPGPPGRDGLSGDKGLQGFAGPPGPAGQIGPPGPVGPRGLP
GPRGDKGNTGPMGFPGEPGREGPRGFPGAPAQKGEKGEPGISVKGSPGLPGPPGDKGEKG
LPGPPGKDGPIGLQGLPGFVGEKGDTGEPGISGLPGTPGEKGDTGPIGPPGPPGIAGLPG
KDGNKGEPGLPGAGGRAGLPGFPGVKGDRGEPGIDGSKGYPGRRGLPGATGRPGLEGAPG
MKGERGEKGSAGFPGLPGIEGKPGRPGPPGMKGDLGPPGAPGLPGVIGYEGFKGDRGPPG
LPGRKGEPGQVSEKGQKGEPGMPGIRGPPGIPGRNGVDGAKGEPGLPGIGRDGLPGPKGE
PGPPGRDGLPGFQGLKGDAGVRGFPGFKGDIGPIGAPGEPGLPGINGLPGEQGDVGPPGV
PGLPGLEGEMGAPGHPGIPGAKGDRGIPGAVGLPGIPGAIGEKGDRGPPGPTISIKGEKG
EPGIPGLRGAPGEKGDRGLEGLSGYDGEKGDSGAPGPVGNPGPSGLPGAKGDEGPRGPTG
VPGLTIKGEKGLPGMPGKHGREGIPGRPGEKGEQGLPGLPGHKGERGPPGPVGLPGEKGD
MGLMGPPGLTGRDGQPGVKGFPGLPGERGEKGEAGLRGPPGPIGQKGEPGFPGPSGIDGI
PGEKGDRGWDGVSGLPGPVGEKGDRGYPGPVGLMGVVGYVGQKGDKGDDCIEPPMGPKGD
RGFPGPVGPPGPPGEKGIPGPPGFPGSNGVKGAIGLQGPPGPVGLPGLPGPVGAPGLPGL
QGPVGVPGIPGEPGLPCEPASDYLTGILLVKHSQSQLLPVCDAGHIKLWEGYSLLFTDGD
ERAHSQDLGYAGSCVRKFSTMPFLFCDINNVCHYGNRGDRSYWLSTTSPIPMMPVQESEI
EQYISRCVVCEVPANVLAVHSQSLNIPDCPQGWTGLWIGYSFLMHTGAGAQGGGQSLSSS
GSCLEDFRATPFIECNGNKGQCHYYMNEISFWMATIEDRQQFQAPEQQTLKAGNLRSKIS
RCQVCIKNT
NT seq 5790 nt   +upstreamnt  +downstreamnt
atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagcgagt
gggcaatataatcatacgtcatggtcgtacaatcctccgcctgttgttcctctcggacgg
ggtgatatcggaaaaccgaacaataccgatgacgattataatatttcaccacgatggaaa
acttttgttacgaataacgaaggttcggatgaagcggacaggcggtacttaagcaatcaa
ggcccgaccgacgatgatcgatacgattacggtcaaagaaccgacgattccgggggagga
tatcacaccaattatgccggcttcgatcaaggatcgtacaatcaaggccgagaacaaatc
cctttggatccttacaatcaagaatctggcgacacttacggaaggtctcgaggttacgag
gactcttacggaagagagggggagggcagcagaggttcttacgggagtggataccgagaa
acttatggatcaagggacgattacggacgcgtagcggatccctacgatcagcgtggatat
tcgcagcgtggaggagggggatacggcgcggctggggattccgacacttatccgagcagt
tacacggttgtaccggtcccgggacagatcccacctcggaattgcaccggatcggcttgc
tgcgtgcccaaatgtttcgcggagaaaggctccagaggaccaccaggtatattgggacca
caggggccgaaagggcagaggggatttccgggcgcggaaggtctgttggggccaaaaggg
gacaaaggtgaacctggtcctcagggaccgcgtggaacgaaaggtgacaggggtaaaatg
ggtatacctggattcactggtatcgctggtgtaccgggggttcaaggtccgcccggggct
ccaggtattccgggtcgtgacggttgcaatggaacagacggtgagcctggtgcgcgaggt
tatcccggagaggtcggtccccgcggttttcgaggtcctcctgggctgaaggggcaaaag
ggtcagccaggtttcgccggcagattccctgtgggtcagaagggtgagcccggtatcgac
ggtgtgagagggcccccgggtccaccgggaccgcaaggagaacacggatttccaggatcg
aagggcgagcgtggcccacctggtccaataggattgcaagggcaaaagggagagaaggga
aatatgggtcttgcgttcgagggtccgaaaggagacaaaggtcagaagggagagatagga
cctcccggaacgcccggccctctggaaccgttccaaggaatgagggaagaagtaatagct
ccgcagggggatcgtggcgaaaaaggagacaagggtgaaatggggccggacggtttcaaa
ggagagccgggtccaatcggagatcaaggtatttctggtagtcctggtatgaagggagag
aaaggtcttccaggggcgccaggtattcgcggtagggatggtttctcgggtcctccgggt
ccacctgggcggaaaggtgatcgaggttacgacggattggacggtcttcccggtcgtcct
ggacagaaaggtgaaccgggacgagacgggccaatgggtgttccaggcttgcgaggacct
cctggtccacccgggggtggaaaaggtacgccgggtccaccggggccgaaagggcctcga
ggttttccggggccgaccgggcctcgtggcgccgacggatacccaggcgatccaggtccc
agaggtcccatagggccagccggagggcccggctcgcaaggtattcccggtccagaaggt
ttgccgggcgagaaaggcgccaagggagagcctgggatcacgggattcccggggccgacg
ggcccacggggattcgacggccctccgggattaccaggtccgcggggattgccgggagag
aaaggcgcctcgctcgtggggcctaaagggatggacggagcgccaggtttggacggagag
aaagggcagaagggggaacgcggttacgcgggaccacgaggagtgccgggcgacgtggac
ggcattccagggccacctggcgaggccggccttcccggcgaacggggaactccggggaaa
gacgggactccagggttctcgggggcgcccggcgaaaaaggagacgcgggcttctgtcta
cctcctcccccggtgtttccagggcctaaaggcgatcgcggtctggacggtacacctggg
cttcccgggcccagaggcccacccggggaacggggattcccaggggaacccggcgcagac
ggattaccagggccgatcggcccaccaggactaccggggaaagatggtattcctggcgcg
gctggtccgcaaggagagcctggaacgccagcggtgattacgtccaacatgattaaaacg
gagaagggcgacaaaggtgtaaggggagaggtgggaaggccaggtccaccgggtccccaa
ggtccagtcggggagaagggcgctataggatttgctggtttcccgggtccaaagggtacc
gctggtgacagaggatttccgggccaagacggggttcctggaaggccaggtattccaggt
cgaaaaggagagcgtggtctgagcgtgaaaggggagcctggagaaccgggccgttcgggt
caaataggtttgaagggtgaacctggttcgtacggacaaaaaggagaacccggccagtgt
ccaccgctcgatttgatcaacagcaagggagacagaggcgcgcctggcgagaagggagag
ccaggcccaccgggcagggacgggttgagcggtgacaaaggtttacaaggattcgcgggt
ccgcctggtcccgctggacaaatcggtccgcctgggccggtagggccgagagggttgccg
ggtccgcgcggcgacaagggtaacacgggtccgatgggtttccccggggaacctggtcgc
gaaggacccagaggattcccgggcgctccagcgcagaaaggagaaaagggcgagcctggg
atatcggtgaagggtagccctggcttgcctggtccaccgggcgacaagggcgagaaaggt
cttcccgggccgccgggaaaagacggtcctatcggtttgcaaggtttgccgggattcgtg
ggggagaagggagacacgggtgagccggggataagcgggttgcccggcacgccaggggag
aaaggagataccggtcccatcgggcctcctggtcctcccggtatcgcgggattacccggc
aaagacggaaacaaaggtgaaccgggattgccgggggcaggtggaagggcgggtcttccg
ggatttccaggcgtgaagggtgatcgaggcgagccgggcatcgacggatcgaaaggttat
ccgggaaggcgtgggttgccgggcgcgactggtagacccggcctggaaggtgcgcctggt
atgaaaggagaacgtggcgagaaagggtcggccgggttccccggattgcccgggatcgaa
gggaaacccggtcgtcctggaccacccgggatgaaaggggacttgggtcctcccggcgct
ccgggcctcccaggtgttataggatacgaaggattcaaaggtgatcgaggtccgccggga
ttaccgggacgtaaaggtgaaccgggtcaggtatcggagaaagggcagaagggtgagccg
ggaatgcctgggatccgcggtcctcccggcatccctggcagaaatggcgtggacggggcg
aaaggagagcctgggttgccaggcatcggccgggatggtctgcctggtcccaagggagag
cccgggccgccaggtcgtgacggtttgccaggattccaaggactgaaaggtgacgctggc
gtgagaggtttccccggttttaaaggagacattggaccgatcggggctcccggcgagcct
ggactgcccggaatcaacggattgccaggtgaacaaggcgacgtcggtccacccggagtt
cctgggttgcccggtttggaaggtgaaatgggggcaccgggacatcctggaatccccggc
gccaaaggggatcgcggtattccaggcgccgttggacttcctggtattcccggggcgatc
ggcgagaaaggcgatcgtggaccgcccggcccgaccatttcgatcaaaggtgaaaaaggc
gaaccgggtattcccggtttacgaggtgcgcctggagaaaagggagatcgcgggttggaa
ggtctgagtggctacgacggcgagaaaggggatagcggcgcgcctggtcccgttggaaat
ccaggtccatccggtctccccggtgctaaaggagacgaaggtccacgcgggcctacggga
gtccctggattgacgatcaagggcgagaaaggtttgccgggtatgcctggaaagcatgga
agggaaggaataccgggacgaccgggagagaaaggggagcaaggattgccaggtttaccg
ggacacaagggagaacgagggccgccaggtccagtcgggttgccgggcgaaaagggtgat
atgggtctcatgggtcctcccggtttaacgggtcgcgatggccaaccaggcgtcaaagga
ttccccggtttgccgggcgagagaggcgagaaaggagaggctggtttacgtggaccaccc
ggtcccattgggcagaagggagaacctggattccctgggccgagcggaatagatggaatt
cccggcgaaaagggcgatagaggttgggatggcgtgagcgggttgccgggtccggtcgga
gagaaaggtgacagagggtatccaggtccggtgggattgatgggcgtggttggatacgtc
ggtcagaaaggcgacaagggtgacgactgcatcgagccaccgatgggaccgaaaggagat
cgcggtttccccggaccggtcggcccgccaggaccaccgggagagaaaggaattccaggc
ccgccagggttcccgggatcgaacggagtgaaaggtgcgatagggcttcaagggccgcca
gggcccgtcggtttgccaggtttgccgggacctgtcggcgcgcctggtttgccgggcctt
caaggaccggtcggtgttccgggtataccgggagaacctggcctaccgtgcgagcccgca
tccgactatcttaccggtatcctgttggtgaaacacagtcaaagtcaattattgcccgtt
tgcgacgccggccacatcaaactctgggaaggatacagtttgctgttcacggatggcgac
gaaagggcgcactcgcaagatttaggttatgccggttcgtgcgtacgaaagttctcgacg
atgccgttcctcttctgcgatataaacaacgtttgccactacggtaatcggggcgatcgt
tcttattggttatccaccactagtccaattcccatgatgcctgtccaggaatcagagata
gaacaatacatctccagatgcgtggtgtgcgaggttccggcaaatgtgttggccgtacac
agtcaatcgttgaatattccagattgtccacaaggatggactggtctttggatcggatac
agttttctcatgcatacgggtgctggtgcccagggaggagggcaatccttgtccagttcc
ggatcctgtctggaagacttccgtgcaacgccgttcatcgagtgcaatggtaataaagga
cagtgtcattattacatgaacgagatcagtttctggatggccaccatcgaagacagacaa
cagttccaagcgcccgagcaacagaccttgaaagcaggaaatctcagatccaaaataagt
cgctgccaagtgtgtataaagaacacgtaa

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