Apis mellifera (honey bee): 408552
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Entry
408552 CDS
T01057
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
ame
Apis mellifera (honey bee)
Pathway
ame04512
ECM-receptor interaction
ame04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ame00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
408552
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
408552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ame04147
]
408552
00536 Glycosaminoglycan binding proteins [BR:
ame00536
]
408552
Exosome [BR:
ame04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
408552
Glycosaminoglycan binding proteins [BR:
ame00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
408552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
408552
NCBI-ProteinID:
XP_392097
BEEBASE:
GB45968
UniProt:
A0A7M7R5C5
LinkDB
All DBs
Position
LG16:complement(6976010..6992150)
Genome browser
AA seq
1929 aa
AA seq
DB search
MTRLGLRFVASAVFLAGIASGQYNHTSWSYNPPPVVPLGRGDIGKPNNTDDDYNISPRWK
TFVTNNEGSDEADRRYLSNQGPTDDDRYDYGQRTDDSGGGYHTNYAGFDQGSYNQGREQI
PLDPYNQESGDTYGRSRGYEDSYGREGEGSRGSYGSGYRETYGSRDDYGRVADPYDQRGY
SQRGGGGYGAAGDSDTYPSSYTVVPVPGQIPPRNCTGSACCVPKCFAEKGSRGPPGILGP
QGPKGQRGFPGAEGLLGPKGDKGEPGPQGPRGTKGDRGKMGIPGFTGIAGVPGVQGPPGA
PGIPGRDGCNGTDGEPGARGYPGEVGPRGFRGPPGLKGQKGQPGFAGRFPVGQKGEPGID
GVRGPPGPPGPQGEHGFPGSKGERGPPGPIGLQGQKGEKGNMGLAFEGPKGDKGQKGEIG
PPGTPGPLEPFQGMREEVIAPQGDRGEKGDKGEMGPDGFKGEPGPIGDQGISGSPGMKGE
KGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLPGRPGQKGEPGRDGPMGVPGLRGP
PGPPGGGKGTPGPPGPKGPRGFPGPTGPRGADGYPGDPGPRGPIGPAGGPGSQGIPGPEG
LPGEKGAKGEPGITGFPGPTGPRGFDGPPGLPGPRGLPGEKGASLVGPKGMDGAPGLDGE
KGQKGERGYAGPRGVPGDVDGIPGPPGEAGLPGERGTPGKDGTPGFSGAPGEKGDAGFCL
PPPPVFPGPKGDRGLDGTPGLPGPRGPPGERGFPGEPGADGLPGPIGPPGLPGKDGIPGA
AGPQGEPGTPAVITSNMIKTEKGDKGVRGEVGRPGPPGPQGPVGEKGAIGFAGFPGPKGT
AGDRGFPGQDGVPGRPGIPGRKGERGLSVKGEPGEPGRSGQIGLKGEPGSYGQKGEPGQC
PPLDLINSKGDRGAPGEKGEPGPPGRDGLSGDKGLQGFAGPPGPAGQIGPPGPVGPRGLP
GPRGDKGNTGPMGFPGEPGREGPRGFPGAPAQKGEKGEPGISVKGSPGLPGPPGDKGEKG
LPGPPGKDGPIGLQGLPGFVGEKGDTGEPGISGLPGTPGEKGDTGPIGPPGPPGIAGLPG
KDGNKGEPGLPGAGGRAGLPGFPGVKGDRGEPGIDGSKGYPGRRGLPGATGRPGLEGAPG
MKGERGEKGSAGFPGLPGIEGKPGRPGPPGMKGDLGPPGAPGLPGVIGYEGFKGDRGPPG
LPGRKGEPGQVSEKGQKGEPGMPGIRGPPGIPGRNGVDGAKGEPGLPGIGRDGLPGPKGE
PGPPGRDGLPGFQGLKGDAGVRGFPGFKGDIGPIGAPGEPGLPGINGLPGEQGDVGPPGV
PGLPGLEGEMGAPGHPGIPGAKGDRGIPGAVGLPGIPGAIGEKGDRGPPGPTISIKGEKG
EPGIPGLRGAPGEKGDRGLEGLSGYDGEKGDSGAPGPVGNPGPSGLPGAKGDEGPRGPTG
VPGLTIKGEKGLPGMPGKHGREGIPGRPGEKGEQGLPGLPGHKGERGPPGPVGLPGEKGD
MGLMGPPGLTGRDGQPGVKGFPGLPGERGEKGEAGLRGPPGPIGQKGEPGFPGPSGIDGI
PGEKGDRGWDGVSGLPGPVGEKGDRGYPGPVGLMGVVGYVGQKGDKGDDCIEPPMGPKGD
RGFPGPVGPPGPPGEKGIPGPPGFPGSNGVKGAIGLQGPPGPVGLPGLPGPVGAPGLPGL
QGPVGVPGIPGEPGLPCEPASDYLTGILLVKHSQSQLLPVCDAGHIKLWEGYSLLFTDGD
ERAHSQDLGYAGSCVRKFSTMPFLFCDINNVCHYGNRGDRSYWLSTTSPIPMMPVQESEI
EQYISRCVVCEVPANVLAVHSQSLNIPDCPQGWTGLWIGYSFLMHTGAGAQGGGQSLSSS
GSCLEDFRATPFIECNGNKGQCHYYMNEISFWMATIEDRQQFQAPEQQTLKAGNLRSKIS
RCQVCIKNT
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagcgagt
gggcaatataatcatacgtcatggtcgtacaatcctccgcctgttgttcctctcggacgg
ggtgatatcggaaaaccgaacaataccgatgacgattataatatttcaccacgatggaaa
acttttgttacgaataacgaaggttcggatgaagcggacaggcggtacttaagcaatcaa
ggcccgaccgacgatgatcgatacgattacggtcaaagaaccgacgattccgggggagga
tatcacaccaattatgccggcttcgatcaaggatcgtacaatcaaggccgagaacaaatc
cctttggatccttacaatcaagaatctggcgacacttacggaaggtctcgaggttacgag
gactcttacggaagagagggggagggcagcagaggttcttacgggagtggataccgagaa
acttatggatcaagggacgattacggacgcgtagcggatccctacgatcagcgtggatat
tcgcagcgtggaggagggggatacggcgcggctggggattccgacacttatccgagcagt
tacacggttgtaccggtcccgggacagatcccacctcggaattgcaccggatcggcttgc
tgcgtgcccaaatgtttcgcggagaaaggctccagaggaccaccaggtatattgggacca
caggggccgaaagggcagaggggatttccgggcgcggaaggtctgttggggccaaaaggg
gacaaaggtgaacctggtcctcagggaccgcgtggaacgaaaggtgacaggggtaaaatg
ggtatacctggattcactggtatcgctggtgtaccgggggttcaaggtccgcccggggct
ccaggtattccgggtcgtgacggttgcaatggaacagacggtgagcctggtgcgcgaggt
tatcccggagaggtcggtccccgcggttttcgaggtcctcctgggctgaaggggcaaaag
ggtcagccaggtttcgccggcagattccctgtgggtcagaagggtgagcccggtatcgac
ggtgtgagagggcccccgggtccaccgggaccgcaaggagaacacggatttccaggatcg
aagggcgagcgtggcccacctggtccaataggattgcaagggcaaaagggagagaaggga
aatatgggtcttgcgttcgagggtccgaaaggagacaaaggtcagaagggagagatagga
cctcccggaacgcccggccctctggaaccgttccaaggaatgagggaagaagtaatagct
ccgcagggggatcgtggcgaaaaaggagacaagggtgaaatggggccggacggtttcaaa
ggagagccgggtccaatcggagatcaaggtatttctggtagtcctggtatgaagggagag
aaaggtcttccaggggcgccaggtattcgcggtagggatggtttctcgggtcctccgggt
ccacctgggcggaaaggtgatcgaggttacgacggattggacggtcttcccggtcgtcct
ggacagaaaggtgaaccgggacgagacgggccaatgggtgttccaggcttgcgaggacct
cctggtccacccgggggtggaaaaggtacgccgggtccaccggggccgaaagggcctcga
ggttttccggggccgaccgggcctcgtggcgccgacggatacccaggcgatccaggtccc
agaggtcccatagggccagccggagggcccggctcgcaaggtattcccggtccagaaggt
ttgccgggcgagaaaggcgccaagggagagcctgggatcacgggattcccggggccgacg
ggcccacggggattcgacggccctccgggattaccaggtccgcggggattgccgggagag
aaaggcgcctcgctcgtggggcctaaagggatggacggagcgccaggtttggacggagag
aaagggcagaagggggaacgcggttacgcgggaccacgaggagtgccgggcgacgtggac
ggcattccagggccacctggcgaggccggccttcccggcgaacggggaactccggggaaa
gacgggactccagggttctcgggggcgcccggcgaaaaaggagacgcgggcttctgtcta
cctcctcccccggtgtttccagggcctaaaggcgatcgcggtctggacggtacacctggg
cttcccgggcccagaggcccacccggggaacggggattcccaggggaacccggcgcagac
ggattaccagggccgatcggcccaccaggactaccggggaaagatggtattcctggcgcg
gctggtccgcaaggagagcctggaacgccagcggtgattacgtccaacatgattaaaacg
gagaagggcgacaaaggtgtaaggggagaggtgggaaggccaggtccaccgggtccccaa
ggtccagtcggggagaagggcgctataggatttgctggtttcccgggtccaaagggtacc
gctggtgacagaggatttccgggccaagacggggttcctggaaggccaggtattccaggt
cgaaaaggagagcgtggtctgagcgtgaaaggggagcctggagaaccgggccgttcgggt
caaataggtttgaagggtgaacctggttcgtacggacaaaaaggagaacccggccagtgt
ccaccgctcgatttgatcaacagcaagggagacagaggcgcgcctggcgagaagggagag
ccaggcccaccgggcagggacgggttgagcggtgacaaaggtttacaaggattcgcgggt
ccgcctggtcccgctggacaaatcggtccgcctgggccggtagggccgagagggttgccg
ggtccgcgcggcgacaagggtaacacgggtccgatgggtttccccggggaacctggtcgc
gaaggacccagaggattcccgggcgctccagcgcagaaaggagaaaagggcgagcctggg
atatcggtgaagggtagccctggcttgcctggtccaccgggcgacaagggcgagaaaggt
cttcccgggccgccgggaaaagacggtcctatcggtttgcaaggtttgccgggattcgtg
ggggagaagggagacacgggtgagccggggataagcgggttgcccggcacgccaggggag
aaaggagataccggtcccatcgggcctcctggtcctcccggtatcgcgggattacccggc
aaagacggaaacaaaggtgaaccgggattgccgggggcaggtggaagggcgggtcttccg
ggatttccaggcgtgaagggtgatcgaggcgagccgggcatcgacggatcgaaaggttat
ccgggaaggcgtgggttgccgggcgcgactggtagacccggcctggaaggtgcgcctggt
atgaaaggagaacgtggcgagaaagggtcggccgggttccccggattgcccgggatcgaa
gggaaacccggtcgtcctggaccacccgggatgaaaggggacttgggtcctcccggcgct
ccgggcctcccaggtgttataggatacgaaggattcaaaggtgatcgaggtccgccggga
ttaccgggacgtaaaggtgaaccgggtcaggtatcggagaaagggcagaagggtgagccg
ggaatgcctgggatccgcggtcctcccggcatccctggcagaaatggcgtggacggggcg
aaaggagagcctgggttgccaggcatcggccgggatggtctgcctggtcccaagggagag
cccgggccgccaggtcgtgacggtttgccaggattccaaggactgaaaggtgacgctggc
gtgagaggtttccccggttttaaaggagacattggaccgatcggggctcccggcgagcct
ggactgcccggaatcaacggattgccaggtgaacaaggcgacgtcggtccacccggagtt
cctgggttgcccggtttggaaggtgaaatgggggcaccgggacatcctggaatccccggc
gccaaaggggatcgcggtattccaggcgccgttggacttcctggtattcccggggcgatc
ggcgagaaaggcgatcgtggaccgcccggcccgaccatttcgatcaaaggtgaaaaaggc
gaaccgggtattcccggtttacgaggtgcgcctggagaaaagggagatcgcgggttggaa
ggtctgagtggctacgacggcgagaaaggggatagcggcgcgcctggtcccgttggaaat
ccaggtccatccggtctccccggtgctaaaggagacgaaggtccacgcgggcctacggga
gtccctggattgacgatcaagggcgagaaaggtttgccgggtatgcctggaaagcatgga
agggaaggaataccgggacgaccgggagagaaaggggagcaaggattgccaggtttaccg
ggacacaagggagaacgagggccgccaggtccagtcgggttgccgggcgaaaagggtgat
atgggtctcatgggtcctcccggtttaacgggtcgcgatggccaaccaggcgtcaaagga
ttccccggtttgccgggcgagagaggcgagaaaggagaggctggtttacgtggaccaccc
ggtcccattgggcagaagggagaacctggattccctgggccgagcggaatagatggaatt
cccggcgaaaagggcgatagaggttgggatggcgtgagcgggttgccgggtccggtcgga
gagaaaggtgacagagggtatccaggtccggtgggattgatgggcgtggttggatacgtc
ggtcagaaaggcgacaagggtgacgactgcatcgagccaccgatgggaccgaaaggagat
cgcggtttccccggaccggtcggcccgccaggaccaccgggagagaaaggaattccaggc
ccgccagggttcccgggatcgaacggagtgaaaggtgcgatagggcttcaagggccgcca
gggcccgtcggtttgccaggtttgccgggacctgtcggcgcgcctggtttgccgggcctt
caaggaccggtcggtgttccgggtataccgggagaacctggcctaccgtgcgagcccgca
tccgactatcttaccggtatcctgttggtgaaacacagtcaaagtcaattattgcccgtt
tgcgacgccggccacatcaaactctgggaaggatacagtttgctgttcacggatggcgac
gaaagggcgcactcgcaagatttaggttatgccggttcgtgcgtacgaaagttctcgacg
atgccgttcctcttctgcgatataaacaacgtttgccactacggtaatcggggcgatcgt
tcttattggttatccaccactagtccaattcccatgatgcctgtccaggaatcagagata
gaacaatacatctccagatgcgtggtgtgcgaggttccggcaaatgtgttggccgtacac
agtcaatcgttgaatattccagattgtccacaaggatggactggtctttggatcggatac
agttttctcatgcatacgggtgctggtgcccagggaggagggcaatccttgtccagttcc
ggatcctgtctggaagacttccgtgcaacgccgttcatcgagtgcaatggtaataaagga
cagtgtcattattacatgaacgagatcagtttctggatggccaccatcgaagacagacaa
cagttccaagcgcccgagcaacagaccttgaaagcaggaaatctcagatccaaaataagt
cgctgccaagtgtgtataaagaacacgtaa
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