Actinosynnema mirum: Amir_5085
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Entry
Amir_5085 CDS
T00957
Name
(GenBank) protocatechuate 3,4-dioxygenase, beta subunit
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
ami
Actinosynnema mirum
Pathway
ami00362
Benzoate degradation
ami01100
Metabolic pathways
ami01120
Microbial metabolism in diverse environments
ami01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Amir_5085
00624 Polycyclic aromatic hydrocarbon degradation
Amir_5085
Enzymes [BR:
ami01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Amir_5085
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
DUF4198
Motif
Other DBs
NCBI-ProteinID:
ACU38907
UniProt:
C6WS87
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All DBs
Position
complement(6058758..6059474)
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AA seq
238 aa
AA seq
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MPSTTIPEYRRDPGSQPPVDFPAYRSNALRAPRRPLVLLPQRLTEVTGPLLGADRVGEHD
HDLTAGHPGEPIGQRITLSGRVLDGGGRPVTGALVEVWQANAAGRYRHDADRHPAPLDPN
FTGAGRCVTDSTGAYSFTTVRPGAYPWRNHDNAWRPAHVHFSLFGVAFTQRLITQVYFPG
DPLLPLDPVFDSVRDEAARASLVAAFDLGRTVPERSLGYRWDIVLRGKDPTPLGDDDD
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ttgccgagcacgacgatccccgagtaccggcgggaccccgggtcccagccgccggtggac
ttcccggcgtaccgctccaacgcgctgcgcgccccgcgcagaccgctggtgctcctgccg
cagcggctcaccgaggtcaccgggccgctgctcggcgcggaccgggtgggggagcacgac
cacgacctcaccgccggtcaccccggtgagccgatcgggcagcggatcaccctgtccggg
cgagtgctcgacggtggtgggcggccggtgaccggcgcgctcgtggaggtgtggcaggcg
aacgcggccggtcggtaccggcacgacgccgaccggcaccccgcgccgctcgacccgaac
ttcaccggggccgggcggtgcgtcacggactcgaccggggcgtactcgttcaccaccgtc
cggccgggcgcgtacccgtggcgcaaccacgacaacgcctggcggcccgcgcacgtccac
ttctcgctgttcggcgtcgcgttcacccagcggctcatcacccaggtgtacttccccggc
gacccgctgctgccgctggacccggtgttcgactcggtgcgcgacgaggcggcccgcgcg
tcgttggtggccgcgttcgacctgggccgcacggtgcccgagcggtcgttgggctaccgc
tgggacatcgtgctgcgcggcaaggaccccacaccgctgggggacgacgatgactga
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