Alligator mississippiensis (American alligator): 102564689
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Entry
102564689 CDS
T03087
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04217
Necroptosis
amj04622
RIG-I-like receptor signaling pathway
amj04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
102564689
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102564689
04625 C-type lectin receptor signaling pathway
102564689
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amj01002
]
102564689
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102564689
Enzymes [BR:
amj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102564689
Peptidases and inhibitors [BR:
amj01002
]
Cysteine peptidases
Family C67
102564689
Ubiquitin system [BR:
amj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102564689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
UCH
TraC_F_IV
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
102564689
NCBI-ProteinID:
XP_006273280
LinkDB
All DBs
Position
Un
AA seq
846 aa
AA seq
DB search
MRPRRFYISIKDFAGGVEVWVPQGTLLSQAAPLEEAPSRDPTFRAQVLDTEEMVKVPSKA
VLELSETYARLLQAVTNGEERLGLFKQEELLRRLSVLRRGDQVRVQITSASGEKVRGVVR
YRGPVSKNRDEAGIIFGVELVGSAAGKGFTDGSFKDQKFFSCRENCGVFVPVSRIEPDEG
SPPRPRWGSSKARNRLQQVEDDPLRSPSLELGDRVFFNMDDSRPTGTVMFCDYLPEKEHA
GIFVGIHLDQPIGSWDGVFKGHALCHFPSPEHGLLLPISKVYKEKIEHNPKASIDNPSLG
FPEDPPCSPSIRYPPRIEQHSPKGPPASLTSIFVDKDKGEKEKEPEENDEEKTLVIPLEI
YSMVEVHDPPIYGVIRWIGNLPEVGETIAGLELEEPLASSCTDGSYRGTRYFQCPPDKGF
FVKLRHCRPDSRFGVPQPLENPVLRCNSLDFRIYASERVLENTPPALGEEGGQRLTGWKK
GIQGHCNSCYLDATLFCMFTFSSVLDSLLLRPADKNDGESYVETRDLLRTEIVNPLRKHG
YVCATKVMSLRRVLEAAGSSPGFTCEEKDPEEFLTLLFRVLKGEPLFNIRSADKDPQGCI
FYQIFMEGALPGVTQGVPTVQQLLEGSLATGDLKFTEAPSCLILQMPRNGKDFKAFATIL
PSLQLDLTDLLEDAPRECCICQELAVSECPQCYGDPHITAGSTRQYCSVCCQQVHRHRAR
SSHHPRLLRLPPELSHLPPLPVPLPRQTMQLYAVLCIQTSHYVAFVRHGPRPEHWLFFDS
MADRQGGQNGFNIPRVTPCPEVADYLEMSPKELQALDPKSLPPCARRLLCDAYMCLYHNT
ALGFYK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgcgccggttctacatttccatcaaggacttcgccgggggcgtggaggtgtgg
gtcccccagggcaccctcctgagccaggctgcaccgctagaggaggccccgtcccgggac
cctaccttcagggcccaagtgctggatacagaggagatggtgaaggtgccctccaaagcg
gtgctggagctgagcgagacctacgccaggctgctacaggcggtcaccaacggggaggag
cggctggggcttttcaagcaggaggagctgctccgacggctctcagtcctgcgccggggg
gaccaggtccgggtccagatcacctcagcgtctggggagaaagtgagaggtgttgtacgc
taccggggacccgtgagcaagaacagagatgaagctgggatcatctttggggtggaattg
gtggggtcagcagctgggaagggcttcacagacgggtccttcaaagaccagaagtttttc
tcatgtcgggagaattgcggggtctttgtccctgtgagtcggattgaaccagatgaaggc
agccccccaaggccccgctggggcagcagcaaggctcgcaacaggttgcagcaggtagag
gatgaccccctgaggtccccttctttggagctcggtgaccgtgtcttcttcaacatggat
gacagccgtcctacaggcaccgtgatgttctgcgactacctgccggagaaggagcatgct
ggcatctttgtgggcatccacctggaccagcctattggttcgtgggatggtgtcttcaag
ggtcatgccctctgccattttccttccccagagcatggacttctcttgccgatctccaaa
gtatataaagaaaagattgagcataaccccaaggcctcaatagataacccctctctaggg
tttcctgaagacccaccatgttccccgtccatccggtatccacccaggatagaacagcac
tctccaaaggggcccccagcctcactcacctccatatttgtggacaaggacaagggggag
aaggagaaagagccagaggagaatgatgaagagaagacgcttgtgattccactggaaatc
tactccatggtggaggtgcacgatcctccgatatatggggtcatccggtggattggaaac
ctaccagaagtgggagagaccattgctggcttagagctggaagagccactggcctcaagc
tgcacagatgggagttaccgagggacgcgctatttccagtgcccaccagacaagggcttt
tttgtgaagctgcgccactgccgtccagactcccgctttggggtaccccagcccctggag
aaccctgtgctgcgctgcaactcactagatttccgcatctatgccagcgagcgggtgctg
gagaacacccctccagcactgggggaggaagggggccagcggcttaccggctggaagaag
gggattcagggtcactgcaactcctgctacctggatgccaccctcttctgcatgttcacc
ttcagctcagtgctggactccctgcttctgcgccctgcagacaagaacgatggagaatcc
tatgtggagacccgggacctgctgagaaccgagattgtcaaccccctgcgcaagcacggc
tacgtctgtgccaccaaggtgatgtccctgcgccgggtgctggaggctgctggatcctct
ccgggcttcacctgcgaggagaaagaccccgaggagtttctcaccctgctattccgggtg
ctgaagggcgagccactctttaatatccggtcagcagacaaggacccccagggctgcatc
ttctaccaaatcttcatggagggggccctgcccggggtgactcagggggttcccacagtg
cagcagctgctggagggctccctggccaccggtgacctcaagttcacggaggccccctcc
tgtctgatcctgcaaatgccccgaaatgggaaggacttcaaggcttttgccaccatcctg
cctagcctgcagctggatctcacagacctgctggaggatgctccccgggagtgctgtatc
tgccaggaactggcagtgagtgaatgtccccagtgctatggggacccccacatcacagca
ggcagcacccggcagtactgcagtgtctgctgccagcaggtgcaccgtcaccgggcccgg
agctcccaccacccccggctgctgcgcctgcccccagagctctcccacctgcctcctctg
ccagtccctttgccccgccagactatgcagctctatgctgtcctctgcatccagaccagc
cattacgtggcatttgttcgccatgggccccgccctgagcactggctcttctttgacagc
atggcagaccgccagggtggccagaatggcttcaacatcccacgggtcaccccatgtcca
gaggtggccgactacctggagatgtcccccaaggagctccaagctctggaccccaagtcc
cttcccccttgtgcccgacgcctgctctgtgatgcttacatgtgcctctaccacaacact
gcccttgggttttacaaataa
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