Alligator mississippiensis (American alligator): 102565627
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Entry
102565627 CDS
T03087
Symbol
CDH4
Name
(RefSeq) cadherin 4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102565627 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amj04515
]
102565627 (CDH4)
Cell adhesion molecules [BR:
amj04515
]
Cadherins
Major cadherins
102565627 (CDH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_3
Cadherin_4
Stevor
Big_9
DUF5527
Motif
Other DBs
NCBI-GeneID:
102565627
NCBI-ProteinID:
XP_014465019
LinkDB
All DBs
Position
Un
AA seq
914 aa
AA seq
DB search
MCGMLLLLLLLLPVWGAARAHAGDLTVRPTCKPGFSEEDYTASVSPNIAEGQKLLKVKFN
GCVGNKGVRYETNNLDFKVRTDGTVYAAHPVHTPSKQTMFVVTAWDHQTLERWETMVRLL
VGEKSQHSGHKQKGKKNASADLIQQQSDTLLPWRQNQNSNGLRRQKRDWVIPPINVPENS
RGPFPQQLVRIRSDKDSEIHIRYSITGVGADQPPMEVFSIDPVSGRMYVTRPMDREERAS
YHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTVTAN
DADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYIVIVQAT
DMEGNLNYGLSNTATAIITVTDVNDNPPEFTTSTYSGEVPENRVEVVVANLTVMDRDQPH
SPNWNAVYRIISGDPSGHFTIRTDPITNEGMVTVVKAVDYEMNRAFMLTVMVSNQAPLAS
GIQMSFQSTAGVTISVTDVNEAPYFPTNQKLIRLEEGVPAGTVLTTFSAVDPDRFMQQAV
RYSKLSDPANWLNINATNGQITTAAVLDRESAYIKNNVYEATFLAADNGIPPASGTGTLQ
IYLIDINDNVPELLPKEAQICEKPNLNVINITAADADIDPNVGPFVFELPSVPSAVRKNW
TITRLNGDYAQLSLRIMYLEAGVYDVPITVTDSGNPPLYKTSIIKVKVCPCDENGDCTTI
GAVAAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDNILK
YDEEGGGEEDQDYDLSQLQQPETMDHVLNKAAGVRRVDERPVGAEPQYPIRPVIPHPGDI
GDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDWGPR
FKKLADMYGGGEED
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgggatgctgctgctgctgctgctgctcctgcccgtgtggggcgcggcgcgggca
cacgctggggatcttacagtgagacccacttgcaagcctggcttttcagaagaagattac
accgcctcggtttccccgaacatcgcggaagggcagaagttactcaaagtaaaatttaat
ggctgtgtcgggaacaagggagttcggtacgaaaccaacaacttggacttcaaggtgagg
acagatgggactgtctatgctgcccatccggtgcataccccttcaaagcagacaatgttt
gtggtgactgcatgggaccaccaaaccctagagagatgggaaacaatggtcagactgctg
gtgggagagaagtctcaacacagtggtcacaagcaaaaaggaaagaagaatgcatctgct
gacctcatacagcaacagagtgacactttattgccatggcgccagaaccaaaattcgaac
gggctgagacggcaaaagagagactgggtcattccaccaatcaatgtaccggaaaactcg
agaggtccttttccacaacagttggttcggattcgttctgataaagacagtgagatccac
atcagatacagcatcactggagtaggagccgaccagcctcctatggaagtcttcagcatc
gatcccgtatctggcaggatgtacgtcacccgcccaatggacagagaagaaagggcttcc
taccatctcagggctcatgcagtcgatatgaatggaaacaaggtggagaaccccattgac
ctctacatctatgtgattgatatgaatgacaacagacctgagtttataaaccaagtctat
aatggatctgttgatgaaggatctaaaccaggtacctatgtgatgacagtgactgcaaac
gatgcagatgatagtactacagccaatgggatggtgagataccgaattgtaactcaaacc
ccacagagtccatcgcagaatatgtttaccattaacagtgaaacgggagacattgtcaca
gtggctgctggactggacagagagaaagttcagcaatacatagtcatcgttcaagctaca
gatatggaaggaaatcttaactatggtctctcaaacacagcaactgcaatcattacggtg
acagatgtgaatgacaatccaccagaattcactaccagcacttattcgggggaggtgccc
gaaaaccgcgtggaagttgtagtcgcaaatttgacggtgatggaccgggaccagccccac
tcgcccaactggaacgccgtgtaccgcatcatcagcggagacccctctggccacttcacc
atccggacggaccccatcaccaacgaaggcatggtaactgtggtgaaggcagtggattat
gagatgaacagagctttcatgctgacggtgatggtatcaaaccaagctccgctggcaagt
ggaatccagatgtccttccagtctacggcgggagtcaccatttcggtcacggacgtcaac
gaggcaccgtatttcccaaccaaccaaaagttaatccgactggaggaaggggtgcccgcg
gggacggtgttgacaacattttcagccgtggatcccgaccgcttcatgcagcaagcagta
agatactcgaagctgtcagatcctgcaaactggctgaacattaatgccacaaacggtcag
atcactactgctgctgtccttgatcgagagtcagcctacattaagaataatgtctacgag
gccacattcttggcggctgacaacggtatccccccagcgagcggcactggcacactgcag
atctacctaattgacatcaatgataatgtcccggagctgctgccaaaggaggcgcagatc
tgcgaaaagcccaacctgaatgtcatcaacataacagccgcggatgctgacatcgatcca
aacgtggggcccttcgtcttcgagctgccaagcgtgccatctgcagtgaggaagaactgg
accatcacccggctaaatggtgactacgcccagctcagtttgcgaatcatgtacctggag
gccggcgtctacgacgtcccaatcaccgtgacagattcggggaaccctcccttgtacaag
acatctatcattaaagtgaaagtgtgtccctgtgatgagaatggagactgcacaaccatc
ggggccgttgcggcagctggactgggcacaggtgccatcattgccatcttgatatgcatc
attattttgctgaccatggttttgctgtttgtggtgtggatgaagcgcagggaaaaggaa
cggcatacgaagcagctgctaatcgaccccgaggacgacgtcagggacaacattctgaaa
tacgacgaggaaggaggcggagaggaagaccaggattatgatttaagccaacttcagcag
ccagagaccatggatcacgtcttgaacaaagcagctggagtcagacgggtagatgagaga
cccgtcggtgctgaaccccagtatcctataagaccagtaatcccccatcctggggatatt
ggtgactttattaatgagggcctgagagcagctgataacgaccccaccgccccaccctac
gattctctcctggtctttgactatgagggcagtggttctaccgcgggctctgtcagctcc
ctcaactcctccagttccggtgatcaggattatgactaccttaacgactgggggcccagg
ttcaagaaactggcagacatgtacgggggaggagaggaagattaa
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