KEGG   Alligator mississippiensis (American alligator): 102565627
Entry
102565627         CDS       T03087                                 
Symbol
CDH4
Name
(RefSeq) cadherin 4
  KO
K06797  cadherin 4, type 1, R-cadherin
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102565627 (CDH4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:amj04515]
    102565627 (CDH4)
Cell adhesion molecules [BR:amj04515]
 Cadherins
  Major cadherins
   102565627 (CDH4)
SSDB
Motif
Pfam: Cadherin Cadherin_pro CADH_Y-type_LIR Cadherin_3 Cadherin_4 Stevor Big_9 DUF5527
Other DBs
NCBI-GeneID: 102565627
NCBI-ProteinID: XP_014465019
LinkDB
Position
Un
AA seq 914 aa
MCGMLLLLLLLLPVWGAARAHAGDLTVRPTCKPGFSEEDYTASVSPNIAEGQKLLKVKFN
GCVGNKGVRYETNNLDFKVRTDGTVYAAHPVHTPSKQTMFVVTAWDHQTLERWETMVRLL
VGEKSQHSGHKQKGKKNASADLIQQQSDTLLPWRQNQNSNGLRRQKRDWVIPPINVPENS
RGPFPQQLVRIRSDKDSEIHIRYSITGVGADQPPMEVFSIDPVSGRMYVTRPMDREERAS
YHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFINQVYNGSVDEGSKPGTYVMTVTAN
DADDSTTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYIVIVQAT
DMEGNLNYGLSNTATAIITVTDVNDNPPEFTTSTYSGEVPENRVEVVVANLTVMDRDQPH
SPNWNAVYRIISGDPSGHFTIRTDPITNEGMVTVVKAVDYEMNRAFMLTVMVSNQAPLAS
GIQMSFQSTAGVTISVTDVNEAPYFPTNQKLIRLEEGVPAGTVLTTFSAVDPDRFMQQAV
RYSKLSDPANWLNINATNGQITTAAVLDRESAYIKNNVYEATFLAADNGIPPASGTGTLQ
IYLIDINDNVPELLPKEAQICEKPNLNVINITAADADIDPNVGPFVFELPSVPSAVRKNW
TITRLNGDYAQLSLRIMYLEAGVYDVPITVTDSGNPPLYKTSIIKVKVCPCDENGDCTTI
GAVAAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDNILK
YDEEGGGEEDQDYDLSQLQQPETMDHVLNKAAGVRRVDERPVGAEPQYPIRPVIPHPGDI
GDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDWGPR
FKKLADMYGGGEED
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgtgcgggatgctgctgctgctgctgctgctcctgcccgtgtggggcgcggcgcgggca
cacgctggggatcttacagtgagacccacttgcaagcctggcttttcagaagaagattac
accgcctcggtttccccgaacatcgcggaagggcagaagttactcaaagtaaaatttaat
ggctgtgtcgggaacaagggagttcggtacgaaaccaacaacttggacttcaaggtgagg
acagatgggactgtctatgctgcccatccggtgcataccccttcaaagcagacaatgttt
gtggtgactgcatgggaccaccaaaccctagagagatgggaaacaatggtcagactgctg
gtgggagagaagtctcaacacagtggtcacaagcaaaaaggaaagaagaatgcatctgct
gacctcatacagcaacagagtgacactttattgccatggcgccagaaccaaaattcgaac
gggctgagacggcaaaagagagactgggtcattccaccaatcaatgtaccggaaaactcg
agaggtccttttccacaacagttggttcggattcgttctgataaagacagtgagatccac
atcagatacagcatcactggagtaggagccgaccagcctcctatggaagtcttcagcatc
gatcccgtatctggcaggatgtacgtcacccgcccaatggacagagaagaaagggcttcc
taccatctcagggctcatgcagtcgatatgaatggaaacaaggtggagaaccccattgac
ctctacatctatgtgattgatatgaatgacaacagacctgagtttataaaccaagtctat
aatggatctgttgatgaaggatctaaaccaggtacctatgtgatgacagtgactgcaaac
gatgcagatgatagtactacagccaatgggatggtgagataccgaattgtaactcaaacc
ccacagagtccatcgcagaatatgtttaccattaacagtgaaacgggagacattgtcaca
gtggctgctggactggacagagagaaagttcagcaatacatagtcatcgttcaagctaca
gatatggaaggaaatcttaactatggtctctcaaacacagcaactgcaatcattacggtg
acagatgtgaatgacaatccaccagaattcactaccagcacttattcgggggaggtgccc
gaaaaccgcgtggaagttgtagtcgcaaatttgacggtgatggaccgggaccagccccac
tcgcccaactggaacgccgtgtaccgcatcatcagcggagacccctctggccacttcacc
atccggacggaccccatcaccaacgaaggcatggtaactgtggtgaaggcagtggattat
gagatgaacagagctttcatgctgacggtgatggtatcaaaccaagctccgctggcaagt
ggaatccagatgtccttccagtctacggcgggagtcaccatttcggtcacggacgtcaac
gaggcaccgtatttcccaaccaaccaaaagttaatccgactggaggaaggggtgcccgcg
gggacggtgttgacaacattttcagccgtggatcccgaccgcttcatgcagcaagcagta
agatactcgaagctgtcagatcctgcaaactggctgaacattaatgccacaaacggtcag
atcactactgctgctgtccttgatcgagagtcagcctacattaagaataatgtctacgag
gccacattcttggcggctgacaacggtatccccccagcgagcggcactggcacactgcag
atctacctaattgacatcaatgataatgtcccggagctgctgccaaaggaggcgcagatc
tgcgaaaagcccaacctgaatgtcatcaacataacagccgcggatgctgacatcgatcca
aacgtggggcccttcgtcttcgagctgccaagcgtgccatctgcagtgaggaagaactgg
accatcacccggctaaatggtgactacgcccagctcagtttgcgaatcatgtacctggag
gccggcgtctacgacgtcccaatcaccgtgacagattcggggaaccctcccttgtacaag
acatctatcattaaagtgaaagtgtgtccctgtgatgagaatggagactgcacaaccatc
ggggccgttgcggcagctggactgggcacaggtgccatcattgccatcttgatatgcatc
attattttgctgaccatggttttgctgtttgtggtgtggatgaagcgcagggaaaaggaa
cggcatacgaagcagctgctaatcgaccccgaggacgacgtcagggacaacattctgaaa
tacgacgaggaaggaggcggagaggaagaccaggattatgatttaagccaacttcagcag
ccagagaccatggatcacgtcttgaacaaagcagctggagtcagacgggtagatgagaga
cccgtcggtgctgaaccccagtatcctataagaccagtaatcccccatcctggggatatt
ggtgactttattaatgagggcctgagagcagctgataacgaccccaccgccccaccctac
gattctctcctggtctttgactatgagggcagtggttctaccgcgggctctgtcagctcc
ctcaactcctccagttccggtgatcaggattatgactaccttaacgactgggggcccagg
ttcaagaaactggcagacatgtacgggggaggagaggaagattaa

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