Alligator mississippiensis (American alligator): 102572234
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Entry
102572234 CDS
T03087
Symbol
NUP153
Name
(RefSeq) nucleoporin 153
KO
K14296
nuclear pore complex protein Nup153
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
amj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102572234 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102572234 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102572234 (NUP153)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102572234 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
zf-RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
102572234
NCBI-ProteinID:
XP_006262042
LinkDB
All DBs
Position
Un
AA seq
1456 aa
AA seq
DB search
MASGSGGGKIRTRRYHLGASTPYSRGKQGIISRVTESVKNIVPGWLQKYFNKSEEEHVDT
SEPRNQVENPLSYHHDYTEEDTTVIDGRVTPESTRIILEEPSTSRSALNFSDVLTRPSLH
RSHLNCTMLDSTAPHCQPSTSSALGIGSSGLSLVKEIKDSTSQHDDDNISTTSGFSSRAS
DKDIAVSKNTVPPLWSAEAERSHSLSQHTPTSSKKPAFNLTAFGALSPSLGNTSVLKTSQ
LGDSPFYPGKTTYGGAAAAARQSKARITPYQMPVRRQMKAKQANVQSYGVTSSTARRILQ
SLEKMSSPLADAKRIPSSVSSPHCSPVDRSVLDITGFHSKRKRVESQLPPVQKLVTPKTV
SLSMSRSQYFKPSLTPTAESGKARQRVDIKHKGMREKNLAIELRTEPPESNSTYPKFSSP
ASNGLSSGGGGGGGKMRRERGLHYISKPGQEQEVEEPVLPKISLPISTMSLPQFSFGSLA
ATTTVSSSSITPTQPVINKVLPASNDSSPVFRFSSPIVKSTEAEVLPPLSIGFTFSVPVV
KSTEPSGSSDSPMPHLFSPGTTTLNSTSNKKKGNDEYDGPFKPAKVLKEGSVLDVLKGPG
FTSLKAHSLAAEQPVTTSTVVYTRPAISSFSAGASGAKETSKPTSSYWQSDACNSCLLQN
KTADNKCITCPAPTVSAVDTTKQTGTAPLSSTVKSAASATGTLGFGDKFKPAAGTWDCDT
CLVHNKPDATKCVACETPKPGTGVMPVMTLPVVIENAVAVTSSSSCTETTVTLGFGDKFK
KPKGSWDCTVCLVSNKAEDSKCVACQSEKPGGSVPVTSSSTSSFSVPSGGFMGLDKFKKP
EGSWDCDICLVQNKAEATKCVACESAKPGTKAELKGFDTAAVSSAVTDPSFTFGIQTSSS
ESLQTLGSTGGFKLGEQGGFKFGIASEVGSSSIVTGGFKFPKTSGDFTFGVSSSDSKSEE
SKKDSKSNNNNFTFGLPSGTSNPSTSAFQFGTSALGQQEKDEPTLGGFSFGTSSTASLAP
AENKTGASGFGFGTKEDKDVAATPFAFKKSDEKKDESPSTKGGFSFGNVESVPAPASQFV
LGRTEEKPDSVTSTVPSLVFGKKVENEETKAQPMFSFGKSEQTKEESTAKPTFSFSLAKP
AEKETEQTKPTFAFGAQASTADQGAAKPTFSFLSSGSSSTAVPSTSANSTSVFGSSTSAS
NPPPVPTPFVFGQASNTVSNSAFGSSAESTASQSFGFSQENKPATSSSTGAAVAPFVFGS
GASSNNTANPGFAFGATTTSSSTGSTSSFVFGSGSSAPAAGPAFGVSQTPAFGQSQGSSQ
PNAPTFGSLSSTSLFSAGSQPAAPAFGSGSSSSQAPAFGQQANQQPGFGSGTPNSGSIFQ
FGSNPNFNFGNSNPGVFTFGANPSAPAAPAQPSGSSGFSFNQPPTFTVGSNGKNVFSASG
SSVSGRKIKTAVRRRK
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggcagcggtggcggcaagatccggacgcggcgctaccacctgggcgcctcc
acgccctactcacggggcaagcagggaatcattagtagagtgacagagtcggtgaagaac
attgtaccagggtggttacaaaagtacttcaataaaagtgaagaggagcatgtagataca
agtgaacctagaaaccaggttgagaatccattaagctaccatcatgattatacagaggaa
gacaccactgtgattgatggaagagtcactcctgagtcgaccagaattattttggaagaa
ccatccacaagtagatctgcattaaacttctcggatgtgttgacaaggccttctcttcat
cgaagtcatctgaattgcaccatgttggattccacagcaccacactgtcaaccctccaca
tcctctgctcttggcattggcagttctggactctccttagttaaagaaataaaagattct
acctctcagcatgatgatgataacatctcaactaccagtggcttctcttctagagcatct
gataaagatatagcagtttcaaaaaatactgtaccacctctctggtctgcagaagcagaa
cggtctcattccctctcacaacatacgcctaccagctctaaaaaacctgcattcaactta
acagcttttggagctctctccccttcacttggtaacacttctgtccttaagacaagccag
cttggggattctccattttatcctggaaaaaccacttacggtggggcagctgcagcagca
aggcagtctaaagcacgaattactccttatcagatgccagtaagaagacaaatgaaagca
aagcaagcaaatgtgcagtcctatggagtgacaagttccacagcacggcgcatcttgcag
tctttggagaagatgtcaagtcctttagcggatgctaaaaggattccatcctctgtttct
tctccacactgttctcctgtggacaggagtgtgctggatattactggcttccattcaaaa
agaaaacgggtggaatcccaactcccaccggttcagaaacttgtaacaccaaagaccgtt
tctttgtcaatgagccggtcccagtattttaaaccatctctgactcctactgctgagtca
ggcaaagctcgacagagagtagacataaagcacaaaggaatgagggagaaaaatctagct
atagaactgcgaacagaaccacccgaaagcaattctacgtaccccaaattcagtagtcct
gcctctaatggactgtcttcaggagggggaggcggcggtggcaaaatgagaagagaaaga
ggcctacactatatatcaaaacctggacaagaacaggaggtagaggagccagtacttcca
aaaatatctttacccatcagtactatgtcattgcctcagttcagctttggttcccttgct
gctactactacggtctcatcatcatcaatcactccaacacaaccagtgattaacaaggtg
ctgccagcaagtaatgatagcagccctgtgttcagattttcatctccaattgtaaaatct
actgaggcagaagtgctacctccgttgtctattgggtttacatttagtgttcctgttgtg
aaatcaacagagccttctggatccagtgatagtccaatgccacatctgtttagcccaggt
accaccactttaaatagcaccagcaataagaagaaaggaaatgatgaatatgatggcccc
ttcaagcctgcaaaagtcttgaaagaggggagtgtgctggatgttttgaaaggccctgga
tttacttctctgaaagcccactctcttgcagctgagcagccagttacaacaagcacagtg
gtttatacaaggcctgcaataagtagtttttctgcaggtgcttcaggagctaaagagacc
tctaagccgacttcatcgtattggcagtctgacgcgtgcaactcgtgtcttctacaaaac
aagactgcagacaacaaatgtataacttgtccagctccaacagtgtcagcagtagatact
actaaacagactggaactgcacctctaagcagcactgttaagtcagctgcatctgcaaca
gggacactgggcttcggagacaaatttaaaccagcagcaggaacgtgggattgtgatacg
tgtctagtccataataaacctgatgctaccaaatgtgtggcctgtgagacaccaaagcct
ggaacaggagtcatgcctgttatgacgttgccagtagtcatagaaaatgcagtagcagtg
acttcctcttctagctgcactgaaacaacagtcactttggggtttggagacaaattcaaa
aagccgaagggttcttgggactgtacagtgtgccttgtgtcaaataaggcagaggacagc
aaatgcgtagcctgtcagtctgagaagccagggggttcagtgcctgtgaccagtagcagt
acttcctcgttctctgttccttctggaggatttatgggattagataaattcaagaagccg
gaaggaagctgggactgtgacatctgcttggtacaaaacaaagcagaggccacaaagtgt
gtagcttgtgagagtgcaaaaccaggtaccaaagctgagctcaaaggttttgatactgca
gccgtgtcctcagctgttactgacccatcatttacatttggtattcagacgtcgtcctca
gagtctttgcagacgttaggaagcacaggaggttttaagctcggagagcaggggggtttc
aagtttggcattgcatcagaagtgggatcctcaagcattgtaacaggggggtttaagttt
cctaaaacttcaggggacttcacatttggagtttcttcttcagactctaaatcagaggag
agtaaaaaagacagtaagagtaacaacaacaattttacctttggacttccctcgggtaca
agcaatccatctacttcagcttttcagtttgggacgtcagccctgggacagcaggaaaag
gacgagccgaccttaggaggtttcagtttcggcacaagttccactgcctccttagctcca
gctgagaataaaactggagcaagtggcttcggttttggaaccaaggaggacaaagacgtt
gcagcaactccctttgcatttaagaaatcggatgagaaaaaagatgagagtccttctaca
aagggaggcttctcttttggcaatgtggagtctgtacctgcacctgcctcacagtttgtt
ttgggaaggacagaagagaagccagactctgtcacctccactgttccttcattagtgttt
gggaagaaagtggagaatgaggaaaccaaggcacaacccatgttttcgtttggaaagtct
gagcaaaccaaagaagagagtacagcgaaacccactttcagttttagtttggcaaagcca
gcagagaaggaaactgaacaaacaaagccaacatttgcatttggggcacaagccagtact
gcagatcaaggagcagcaaagccaactttcagtttcttaagttctggttcctccagtaca
gctgtaccaagcacttcagcaaacagcaccagtgtgttcggaagctccacctctgcctcg
aatccaccaccagttcccactccctttgtgtttggacaagccagcaacactgtgagcaac
tctgcttttggcagttctgcagagtctactgcatcgcagtcatttgggttctctcaagaa
aacaagccagcaacatcctccagcacaggggcagctgttgctccatttgtctttggttca
ggagctagcagtaacaatacagcaaaccctggttttgcctttggagccacaactacatca
agctctacaggttccacctcttcatttgtatttggctccgggtcttcagcacctgctgct
ggtccagcatttggtgtcagccagacaccagcatttggtcagagtcaaggctccagccag
ccaaatgctccaacctttggatccttatcatcaacctctttattttcagctggctctcag
cctgctgctccagcctttgggtctggatcaagtagtagtcaagctcctgcatttggacag
caagcaaatcaacagcctggctttggctctggtacacccaattctggttcgatattccag
tttggaagtaatcctaatttcaacttcggaaatagcaacccgggagtatttacctttggt
gcaaatcccagtgcaccagcagcaccagcccaaccctctggctcttcaggattttcattt
aaccagcctccaacttttacagtggggagtaatgggaaaaatgttttctctgcttcggga
tcttcagtttctggtcggaagataaagactgcggttagacgtagaaaataa
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integrated database retrieval system
