Alligator mississippiensis (American alligator): 102574619
Help
Entry
102574619 CDS
T03087
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04110
Cell cycle
amj04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102574619 (SMC3)
04114 Oocyte meiosis
102574619 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102574619 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
amj00535
]
102574619 (SMC3)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102574619 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
102574619 (SMC3)
Proteoglycans [BR:
amj00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
102574619 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
102574619
NCBI-ProteinID:
XP_014450166
LinkDB
All DBs
Position
Un
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSAESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtgatcatccaggggtttcgaagttacagagatcagacaattgtg
gatcctttcagttcgaagcataacgtcatagtgggaagaaatggatctggaaaaagtaac
tttttctatgcaattcagttcgtcctcagtgatgagtttagtcaccttcgcccagaacag
agactggctttattgcatgaaggcacaggaccacgcgttatttcggcttttgtggaaatc
atttttgacaactctgacaacagattaccaatcgataaagaagaagtgtcacttcgcaga
gtcattggagccaaaaaggaccaatattttttagacaagaaaatggtgacgaaaaacgat
gtgatgaatcttcttgagagtgctggtttttctcgcagcaatccctactatattgtcaag
caaggaaagatcaatcagatggcaacagcaccagactctcagaggttgaagctgttaaga
gaagtagctggtactagagtatatgatgaacgtaaagaagagagtatttcattaatgaaa
gaaacagagggtaaacgagagaaaatcaatgagttgctgaagtacattgaagagcgatta
catacactagaagaggagaaagaagagcttgctcaatatcaaaagtgggataaaatgagg
agagcactagaatacaccatttataaccaggagcttaatgaaacccgtgctaagctggat
gagctttctgccaaacgagagacgagcggagagaaatcaaggcagctgagagatgcacaa
caagatgccagagataagatggaggaaatagaacgacaggttcgagaactaaaaacaaag
atttcagcaatgaaagaagaaaaggaacagcttagtgctgaaagacaggagcagattaaa
cagaggactaaactggagcttaaagctaaagacttgcaagacgagctggctggcaacagt
gaacaacggaaaaggctgttaaaggagagacagaagcttcttgaaaaaattgaggagaag
cagaaagaactagcagaaacagaacccaaattcaacagcgtaaaagagaaggaagagcga
ggaattgctagattagcacaagctacccaggaaagaacagatctttatgcaaaacaaggt
cgtggaagtcagtttacgtccaaggaagaaagagataagtggattaaaaaagaactgaag
tctctagatcaggccatcaatgacaagaaacgacagattgcagctatccacaaggattta
gaggatacagaggctaataaagagaagaatctggagcagtacagtaaattggaccaggat
cttaatgaagtgaaggctcgtgttgaagaactggacagaaaatattatgaagtgaaaaac
aaaaaagatgaactacagagtgaaagaaattatctgtggagagaggagaatgcagaacaa
caagctctagctgcaaaacgagaggacttggaaaaaaaacagcagcttcttagagcagca
acaggaaaggcaattctaaatggtatagacagcataaataaggttttggagcacttccgt
cgaaaaggcataaaccagcatgttctaaatggctatcatggaattgtgatgaataacttc
gagtgcgaacctgctttctacacttgtgttgaagttactgcggggaacaggttattttat
catattgtggattctgatgaagtcagtacaaagattttaatggagtttaataaaatgaac
cttcctggagaagtaacttttctgcctcttaacaagctggatgttagagatactgcttac
cctgagacgaatgatgctattcctatgatcagtaaactgagatacaatccaagatttgac
aaagccttcaaacatgtttttggaaagactctaatctgtcgtagcatggaggtatctacc
cagttggctagagctttcactatggattgtattactttggaaggcgatcaagtcagccat
cgtggtgctttaactggaggttattatgatacaagaaagtctcgacttgaactgcagaaa
gatgttagaaaggcagaagaagaacttggtgaacttgaggcaaaacttaatgaaaatttg
cgcagaaacattgaaaggattaacaatgaaattgaccaactgatgaaccagatgcaacag
attgagacccagcagagaaaattcaaagcttccagagacagtatcttgtcagagatgaaa
atgctgaaagagaagaggcagcagtctgaaaaaacctttatgcccaagcaacgcagcttg
caaagcttggaggcaagtctacatgccatggaatcaactcgggaatcattaaaagcagaa
cttggaacagacttgctatctcagctcagcctagaggatcagaaacgtgtggatgctctt
aatgatgagattcgacagttgcaacaagaaaacaggcagcttctgaatgagaggataaaa
ttggaaggcatcatcacaagagttgaaacgtacctcaatgaaaatctgagaaaacgatta
gaccaagtggagcaagagctgaacgagctacgtgaaacagaagggggcacagttcttact
gccacaacatcagaacttgaggctatcaacaaacgagtgaaagataccctggcacgatca
gatgatctggataattcaattgacaaaacagaagcggggattaaagaacttcaaaaaagt
atggagcgctggaagaacatggaaaaggaacacatggatgccattaaccatgacacgaaa
gaacttgagaagatgactaaccggcaaggcatgcttcttaagaagaaagaggaatgcatg
aagaagatcagggagttgggctctctcccacaggaggcctttgaaaaatatcagacattg
agtttgaagcagttgttccgtaaattagagcaatgcaacacagaactgaaaaaatacagt
catgtcaataaaaaagctctggaccagtttgtcaacttctcagaacagaaggaaaagttg
ataaaacgacaggaggagctggataggggctacaaatctatcatggagctgatgaatgtg
cttgaactcagaaaatatgaagccatccagctgactttcaaacaggtgtcaaaaaatttc
agtgaagtgttccagaagctagtacctggcggcaaagccacactggtaatgaagaaagga
gatgtggaaggcagtcagtcccaggatgagggagaaggcagtgccgagagcgagagggga
tctggatcacagagtagcgtgccatctgtcgaccagttcactggagttggaattcgggtg
tcatttacaggaaaacagggtgagatgagagaaatgcagcaactttcaggtggacagaaa
tcgttagtggccctagctctgatttttgctatccagaaatgtgatccggctcccttttac
ctctttgatgaaatcgaccaagctctagatgctcaacacagaaaggctgtttcggatatg
attatggaactagctgaacacgcccagttcattacgacaacttttaggcctgaacttctc
gagtccgctgacaagttctacggtgtaaaattcagaaacaaggttagtcatattgatgtg
atcacagcagagatggccaaagattttgtggaagatgataccactcatggttaa
DBGET
integrated database retrieval system
