Ailuropoda melanoleuca (giant panda): 100464278
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Entry
100464278 CDS
T01329
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100464278 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100464278 (CNOT3)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100464278 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100464278 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
100464278
NCBI-ProteinID:
XP_034528443
Ensembl:
ENSAMEG00000004528
LinkDB
All DBs
Position
12:complement(27172938..27186874)
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AA seq
749 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPSYPPGPPPAASALSTTPGNNGASAPAAPSALGPKASPA
PSHSAGTPAPYAQAVAPPAPSGSSTAQPRPPSVQPGGGGGGGSGGGSGSSNSSGGAGKQN
GATSYSSVVADSPAEVALSSSGGNSASSQALGPPSGPHNPPPSTSKEPSVAAPAGAGGVA
PCSGNNTGGPSLLVPLPVNPPSSPTPSFSEAKAAGALLNGPPQFSAAPEIKAPEPLSSLK
SMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVCPLGP
VALTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQ
RLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTY
IYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgaa
ggcgtggagcagtttgaagatatttggcagaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagcttcaacggctgagggac
cagatcaagacatgggtagcgtccaacgaaatcaaggataagaggcagctcgtagacaac
cgcaagctcattgagacgcaaatggaacggttcaaagttgtggagcgagagaccaagact
aaagcctacagcaaggagggcctgggcctggcacagaaggtggaccctgcccagaaggag
aaggaggaggttggccagtggctcacaaacaccatcgacaccctgaacatgcaggtggac
cagtttgagagtgaagtggagtccctgtccgtgcagacacgcaagaagaagggtgacaag
gatcagaagcaggaccggatcgagggcctgaagcggcacatcgagaagcaccgctaccac
gtgcgtatgctggagaccatcctgcgcatgctggacaacgactccatcctcgtcgacgcc
atccgcaagatcaaggacgacgtggagtactacgtcgactcgtcccaggaccccgacttc
gaggagaatgagttcctctatgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagtcacatggaggatgagatcttcaaccagtcaagcagc
acacccacctcgaccacctccagctctcccatcccgcccagcccggccaactgcaccacg
gaaaactctgaagacgacaagaagaggggacgctcaacggatagcgaagtcagccagtct
ccagccaaaaacggctccaagcctgtccacagcaaccagcaccctcagtccccggctgtg
ccgcccagctacccgcccggccccccgcctgccgcctctgccctcagcaccacccctggc
aacaacggggcctccgccccagcagcgccaagtgccctgggccccaaggccagcccagct
cccagccacagtgcaggcacccctgccccctatgcccaggccgtggccccgccagccccc
agcgggtccagcaccgcccagccccggcctcccagcgtccagcctggtgggggcggggga
ggcggcagcggtggaggcagtggcagcagtaacagcagcggaggcgctggcaagcagaac
ggcgccaccagttacagctctgtggtggcagacagcccggcagaggtggctctcagcagc
agtgggggcaacagcgccagcagccaggctctgggccccccgtcgggcccccacaaccca
cctcccagcacctcgaaggaacccagtgtggcggccccagcaggggctggaggtgtggct
ccatgctcagggaacaacacagggggacccagcctcctggtgccacttcctgtgaaccct
cccagctccccgacacccagcttcagcgaggccaaggcagctggtgccctgctcaacgga
cctccgcagttcagcgctgccccagagatcaaggccccggagcctctgagctctctgaag
tccatggcggagcgggcggccatcagctctggcatcgaggaccccgtgcccacgctgcac
ctgaccgagcgagacatcatcctgagcagcacgtctgccccgccggcctcagcgcagcct
cccctgcagctgtcggaggtgaacatcccgctgtcactgggcgtgtgtcccttggggccc
gtggccctcaccaaggagcagctctaccagcaggccatggaggaggccgcctggcaccac
atgccccacccctcagactccgagcgcatccggcagtacctcccccggaacccctgcccg
acgcccccctaccaccaccagatgccacccccacactcggacaccgtggagttctaccag
cgcctgtcaacggagacgctcttcttcatcttctactatctggagggcacgaaggcgcag
tacctggcagccaaggctctaaagaagcagtcgtggcgattccacaccaagtacatgatg
tggttccaaaggcacgaggagcccaagaccatcacggatgagtttgagcagggcacctac
atctactttgactacgagaagtggggccagcggaagaaggaaggcttcacctttgaatac
cgctacctggaggaccgggacctccagtga
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