KEGG   Ailuropoda melanoleuca (giant panda): 100466106
Entry
100466106         CDS       T01329                                 
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
  KO
K24355  collagen type XXIII alpha
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:aml00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100466106 (COL23A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:aml00536]
    100466106 (COL23A1)
Glycosaminoglycan binding proteins [BR:aml00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100466106 (COL23A1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 100466106
NCBI-ProteinID: XP_034511613
LinkDB
Position
3:4847177..5157121
AA seq 480 aa
MGTCSNVNTVSGRPAVLSGSQGTWAGGAAEVRARQRGAARHPGQKLEGLAKHRTVREAPT
SCVCPPGPPGRRGKAGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDLGPR
GDQGRDGAAGPPGPPGPPGARGPPGDTGKDGPRGAQGPAGPKGEAGRDGEMGLKGPPGPK
GDDGTPSQPGLPGPPGPKGEPGNVGPRGENGVDGAPGPKGEPGQRGADGASGLRGPQGLK
GEQGDTVVIDYDGRILDALRGPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGAKG
DPGEAGPTGPKGEAGEMGLSGLPGTDGPKGEKGESASDSLRESLAQIIVAPGPPGPPGPP
GPMGLQGIQGPKGLDGAKGEKGVSGERGPSGPPGPAGPPGLIGLPGTKGEKGRPGEPGLD
GFPGPRGEKGDRSERGEKGERGVPGRKGVKGQKGEPGPPGLDQPCPVGPDGLPVPGCWHQ
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggggacgtgcagtaacgttaacacagtgtccgggcgccccgcagtcctctcgggatcg
cagggaacctgggccgggggagccgccgaggtgcgcgcgcgacagcggggtgcagcccgg
caccccggacagaagttggagggactggccaagcaccggacagttcgggaagcgccgacc
tcatgcgtctgcccaccaggccctcccggacggcgtggcaaggctggaagaagaggcgac
cccggtcctcccgggcaatcaggacgagatggctacccggggccgctgggtctggatggc
aagcccggacttccaggccccaaaggggaaaagggtgccccaggagacctcggccctcgg
ggagaccaagggcgagatggagctgcggggcctccgggaccccctggaccccctggggcc
cggggccctcctggcgacactgggaaagatggccccaggggggcacaaggcccagcgggt
cccaaaggagaggctggacgagacggcgagatgggcctgaagggacccccgggccccaag
ggggatgacgggacgccaagccagccagggctccctggacccccaggccccaagggcgag
ccagggaacgtggggcctcgaggagaaaatggtgtggacggcgccccagggccaaaggga
gagcctggccagcgaggtgcggatggagcctcgggactgcggggtccccagggcctcaag
ggcgagcaaggagacacagtggtgattgactacgacggcaggatcctggatgccctcagg
ggtcctcccgggccacaggggcccccagggccaccagggatccccggagccaagggcgag
ctgggattgcctggtgccccaggaatcgatggagagaagggtcccaaaggagctaaagga
gacccaggagaggctgggccgacaggacccaaaggggaggcaggcgagatgggcctgtcg
ggcctcccgggcaccgatggccccaagggggagaagggagagtcggcatctgacagccta
cgggagagcctggcccagatcatagtggcgccggggccccccggcccccctggtccccca
ggccccatgggccttcagggaatccagggtcccaagggcttggacggagcaaagggagag
aagggtgtgtcgggtgagagaggccccagcggcccacctgggccagctggcccgccaggc
ctcatcgggctgccaggaaccaaaggagagaagggaagacccggggagccaggactagac
gggttccctggaccccgaggagagaaaggtgaccggagcgaacgtggagagaagggggag
cgaggtgtcccaggccggaaaggtgtgaagggccagaagggcgagccgggaccgccgggc
ttggaccagccatgtcctgtgggccccgatgggctgcccgtgccgggctgctggcatcag
tga

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