Ailuropoda melanoleuca (giant panda): 100466106
Help
Entry
100466106 CDS
T01329
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100466106 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aml00536
]
100466106 (COL23A1)
Glycosaminoglycan binding proteins [BR:
aml00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100466106 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100466106
NCBI-ProteinID:
XP_034511613
LinkDB
All DBs
Position
3:4847177..5157121
Genome browser
AA seq
480 aa
AA seq
DB search
MGTCSNVNTVSGRPAVLSGSQGTWAGGAAEVRARQRGAARHPGQKLEGLAKHRTVREAPT
SCVCPPGPPGRRGKAGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDLGPR
GDQGRDGAAGPPGPPGPPGARGPPGDTGKDGPRGAQGPAGPKGEAGRDGEMGLKGPPGPK
GDDGTPSQPGLPGPPGPKGEPGNVGPRGENGVDGAPGPKGEPGQRGADGASGLRGPQGLK
GEQGDTVVIDYDGRILDALRGPPGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGAKG
DPGEAGPTGPKGEAGEMGLSGLPGTDGPKGEKGESASDSLRESLAQIIVAPGPPGPPGPP
GPMGLQGIQGPKGLDGAKGEKGVSGERGPSGPPGPAGPPGLIGLPGTKGEKGRPGEPGLD
GFPGPRGEKGDRSERGEKGERGVPGRKGVKGQKGEPGPPGLDQPCPVGPDGLPVPGCWHQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggggacgtgcagtaacgttaacacagtgtccgggcgccccgcagtcctctcgggatcg
cagggaacctgggccgggggagccgccgaggtgcgcgcgcgacagcggggtgcagcccgg
caccccggacagaagttggagggactggccaagcaccggacagttcgggaagcgccgacc
tcatgcgtctgcccaccaggccctcccggacggcgtggcaaggctggaagaagaggcgac
cccggtcctcccgggcaatcaggacgagatggctacccggggccgctgggtctggatggc
aagcccggacttccaggccccaaaggggaaaagggtgccccaggagacctcggccctcgg
ggagaccaagggcgagatggagctgcggggcctccgggaccccctggaccccctggggcc
cggggccctcctggcgacactgggaaagatggccccaggggggcacaaggcccagcgggt
cccaaaggagaggctggacgagacggcgagatgggcctgaagggacccccgggccccaag
ggggatgacgggacgccaagccagccagggctccctggacccccaggccccaagggcgag
ccagggaacgtggggcctcgaggagaaaatggtgtggacggcgccccagggccaaaggga
gagcctggccagcgaggtgcggatggagcctcgggactgcggggtccccagggcctcaag
ggcgagcaaggagacacagtggtgattgactacgacggcaggatcctggatgccctcagg
ggtcctcccgggccacaggggcccccagggccaccagggatccccggagccaagggcgag
ctgggattgcctggtgccccaggaatcgatggagagaagggtcccaaaggagctaaagga
gacccaggagaggctgggccgacaggacccaaaggggaggcaggcgagatgggcctgtcg
ggcctcccgggcaccgatggccccaagggggagaagggagagtcggcatctgacagccta
cgggagagcctggcccagatcatagtggcgccggggccccccggcccccctggtccccca
ggccccatgggccttcagggaatccagggtcccaagggcttggacggagcaaagggagag
aagggtgtgtcgggtgagagaggccccagcggcccacctgggccagctggcccgccaggc
ctcatcgggctgccaggaaccaaaggagagaagggaagacccggggagccaggactagac
gggttccctggaccccgaggagagaaaggtgaccggagcgaacgtggagagaagggggag
cgaggtgtcccaggccggaaaggtgtgaagggccagaagggcgagccgggaccgccgggc
ttggaccagccatgtcctgtgggccccgatgggctgcccgtgccgggctgctggcatcag
tga
DBGET
integrated database retrieval system