KEGG   Ailuropoda melanoleuca (giant panda): 100473711
Entry
100473711         CDS       T01329                                 
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X10
  KO
K06753  roundabout, axon guidance receptor 1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:aml00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    100473711 (ROBO1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:aml04515]
    100473711 (ROBO1)
Cell adhesion molecules [BR:aml04515]
 Immunoglobulin superfamily
  ROBO family
   100473711 (ROBO1)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 V-set C2-set_2 Pur_ac_phosph_N Big_4
Other DBs
NCBI-GeneID: 100473711
NCBI-ProteinID: XP_002923471
Ensembl: ENSAMEG00000001345
LinkDB
Position
1:complement(30127352..31232850)
AA seq 1606 aa
MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT
IRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSA
EFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKA
EASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSTSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPV
IRQGPVNQTVAVDGTLVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLETGVLQIRYAK
LGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNT
VTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRA
ANAYGISDPSQISDPVKTQDVPPTSQGIDHKQVQRELGNVVLHLHNPTILSSSSIEVHWT
VDQQSQYIQGYKILYRPSGANHGESEWLVFEVRTPTKNSVVIPDLRKGVNYEIKARPFFN
EFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVTWQPPPEDTQNGMVQEYKVW
CLGNETRYHINKTVDGSTFSVVIPSLVPGIRYRVEVAASTGAGAGVKSEPQFIQLDSHGN
PVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIR
KVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSN
LTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFHSPNLKDGRFVN
PSGQPTPYATTQLIQSALSNNMNNGSGDSSEKHWKPPAQQKQEVAPIQYNIMEQNKLNKD
YRANDTVPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADL
LPPPPAHPPPLSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRG
AASSPAAVSYSHQSTATLTPSPQEELQPMLQDGPEETGHTQHQPDRRRQPVSPPPPPRPI
SPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESS
VTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQD
ASGRRHFHASQCPRPTSPVSTDSNMSTAVIQKARPAKKQKHQPGHLRREAYTDDLPPPPV
PPPAIKSPTVQSKAQLEVRPVMVPKLPSIEARTDRSSDRKVGSYKGREVLDGRQVTDMRT
NPGDTREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSS
SMSSRGSGSRQREQGNVGRRNIAEMQVLGGYERGEDNNEELEETES
NT seq 4821 nt   +upstreamnt  +downstreamnt
atgatcgcggagcctgctcacttttacctctttggattaatatgtctctgttcaggctcc
cgtcttcgtcaggaagattttccacctcgcattgttgaacacccttccgacctaattgtg
tcaaaaggagaacctgcaactttgaactgtaaagctgaaggccgccccacacccactatc
gaatggtacaaagggggggagagagtggagacagacaaagatgaccctcgctcacaccga
atgttgctgccaagtggatctttatttttcttacgcatagtacatggacgaaaaagcagg
cctgatgaaggggtctacgtctgtgtagcaaggaattacctcggagaggctgtgagccat
aatgcatcgctggaggtggctatcctacgggatgacttcagacaaaatccttccgatgtc
atggtggcagtgggggagcccgctgtgatggaatgccagccaccacgaggccatcctgag
cccaccatttcatggaagaaagatggctctccactggatgacaaagacgaaagaataact
atacgaggcggaaagctcatgattacttacacccgcaaaagtgatgctggcaagtacgtt
tgtgttggtaccaacatggttggggaacgtgagagtgaagtggcggagcttactgttttg
gagagaccatcgtttgtgaagagacctagtaacttggccgtaactgtggatgacagtgca
gaatttaaatgtgaggcccgaggtgaccctgtgcctacggtacgatggagaaaagacgat
ggagaactgcccaaatccagatacgagatcagagatgatcataccttgaagattcggaaa
gtgatggctggtgacatggggtcatacacttgtgttgcagaaaatatggttggaaaagct
gaagcatcagctactctgactgtccaagttgggtctgaacctccacactttgttgtgaaa
ccccgtgaccaggttgttgccttgggacgaactgtaacgttccagtgtgaagcaaccgga
aatcctcaaccagctattttttggagaagagaggggagtcagaatctgcttttctcatat
cagccaccacagtcaacaagccgcttttcagtctcccagactggtgatctcacaatcact
aacgtccaacgatctgatgttggttattatatctgccagactttaaatgttgccggaagt
atcatcacaaaagcctatttggaagttactgatgtgattgcggaccggcctccccccgtc
attcgacaaggtcctgtgaatcagaccgtagcagtggatggtactttagtgctcagctgt
gtggccacaggcagtccggtgcccacgattctgtggagaaaggatggagtccttgtttca
acccaagattctcgaatcaagcagctggagacgggagtcctgcagatccgatacgctaag
ctgggtgacacaggtcggtacacctgcattgcatcgacccccagtggtgaagcaacttgg
agtgcttacattgaagtccaagaatttggagttccagttcaacctccaagacccaccgac
ccaaatttaatcccaagtgccccctcaaaacccgaagttacagatgtcagcagaaataca
gttacgttgtcatggcaaccaaatttgaactcaggtgcaactccaacatcttacattata
gaagccttcagccatgcatctggtagcagctggcagaccgtagcagagaatgtgaaaaca
gaaacatttgccattaaaggactcaaacctaatgcaatttaccttttcctcgtgagggca
gcaaatgcatatggaattagtgatccaagccagatatcagatccagtgaaaacacaagat
gtccccccaacgagtcagggcatagatcacaagcaggtccagagagaactgggaaatgtt
gtactgcacctccacaaccctaccatcctttcttcctcttcgatcgaagtgcactggaca
gtggaccaacagtctcagtatattcaaggatataaaattctttaccggccatctggagcc
aaccatggtgaatcggagtggttagtttttgaagtgaggaccccaaccaaaaacagcgtg
gttatccctgatctcagaaagggagtcaactatgaaattaaggctcgtcctttttttaat
gaatttcaaggagccgatagtgaaattaaatttgccaaaaccttagaagaagcacccagt
gccccaccccaaagtgtaactgtatcaaagaatgatggaaatggaacagcaattcttgtt
acttggcagcctcctcccgaagacactcaaaatggaatggtccaagagtataaggtttgg
tgtctgggcaatgaaactcgctatcatataaacaagacggtggatggttccaccttttct
gtggtcattccttctctggttccggggatccgatacagagtggaggtggcagccagcacg
ggggccggggctggggtgaagagcgagccacagtttatccagttagattctcacggaaac
cccgtgtcgcctgaagaccaagtcagcctcgctcagcagatctcagacgtggtcaagcag
ccagccttcatcgcaggaattggcgcggcctgttggatcatcctcatggtctttagcatc
tggctctatcgacaccggaagaagagaaatggactgactagtacttacgcaggtatcaga
aaagtaacttatcagagaggaggtgaagctgtgagcagtggagggaggccaggccttctg
aacatcagcgaacctgccacgcagccatggctggcagacacgtggcccaatactggcaac
aaccacaatgactgctccatcaattgctgcacggcaggcaatggtaacagtgatagcaac
ctgaccacctacagtcgcccagctgattgtatagccaattataacaaccaactggataac
aaacaaacaaatctgatgctccctgagtcaactgtttatggtgatgtggaccttagtaac
aaaatcaatgagatgaaaaccttccatagcccaaatctgaaggacgggcgttttgtcaat
ccatcagggcagcccactccttacgccaccacccagctcatccagtcagccctcagcaac
aacatgaacaatggcagtggggactccagcgagaagcactggaaaccgccggcacagcag
aaacaggaagtggccccaattcagtataacatcatggagcaaaacaaactgaacaaagat
tatcgagcaaatgacacagttcctccaactatcccatacaaccaatcatacgaccagaac
acaggaggatcctacaacagttcagaccggggcagtagtacatcggggagtcaagggcac
aagaaaggggcacggacacccaaagtaccgaaacagggtggcatgaactgggcagacctg
cttcctcctcccccggcacaccctcctcctctcagcaatagtgaagagtacagtatttct
gtagatgaaagctacgaccaagaaatgccgtgtcccgtgccaccagcaagaatgtatttg
caacaggatgaactagaagaggaggaagatgaacgaggccccactccccctgtgcgggga
gcagcttcttctccagctgctgtgtcttacagccatcagtccactgccaccctgacccct
tccccacaagaagaactccagcccatgttacaggacggcccggaggagactggccacacg
cagcaccaacccgatcggagacggcagccggtgagcccccctccaccaccaagaccgatt
tccccaccacacacctatggctacatttcaggacctcttgtctcagacatggatacggat
gcaccagaagaggaagaagatgaagcagacatggaagttgccaagatgcagaccagacgg
cttttgctacgtggccttgagcagacccccgcctccagtgtgggggacctggagagctct
gtcactgggtccatgatcaatggctggggctcagcctcagaggaggacaacatttccagt
ggacgctccagcgtgagttcttctgatggctccttcttcaccgatgccgattttgcccag
gcagtcgcagcagccgcggagtatgctggtctgaaggtggcacgccgtcaaatgcaggac
gcttctggccgccgacattttcatgcgtcccagtgccctagacccacaagtcctgtttct
acagacagcaacatgagcactgctgtaatacagaaggccagaccagccaagaagcagaaa
catcagccaggacatctgcgcagagaagcctacacagatgatcttccaccccctccggtg
ccaccacctgctataaagtcacccactgtccaatccaaggcacagctggaggtgcgacct
gtaatggtgccaaaactcccttctatagaagcaagaacagacagatcatcagatagaaaa
gtaggcagttacaaggggagagaagtattggatggaagacaagttactgatatgagaacc
aatccgggtgatacgagagaagcacaggaacagcaaaatgatgggaaaggacgaggaaac
aaggcagcaaaacgagaccttccaccagcaaagactcacctcatccaagaggatattctg
ccttactgtagacctacttttccgacatcaaataatcccagagatcctagttcttcaagc
tcaatgtcgtcaagaggatcaggaagcagacaaagagaacaaggaaatgtaggtcgaaga
aatattgcagaaatgcaagttcttggaggatatgaaagaggagaagataataatgaagaa
ttagaggaaactgaaagctga

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