Ailuropoda melanoleuca (giant panda): 100473711
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Entry
100473711 CDS
T01329
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X10
KO
K06753
roundabout, axon guidance receptor 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100473711 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aml04515
]
100473711 (ROBO1)
Cell adhesion molecules [BR:
aml04515
]
Immunoglobulin superfamily
ROBO family
100473711 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Big_4
Motif
Other DBs
NCBI-GeneID:
100473711
NCBI-ProteinID:
XP_002923471
Ensembl:
ENSAMEG00000001345
LinkDB
All DBs
Position
1:complement(30127352..31232850)
Genome browser
AA seq
1606 aa
AA seq
DB search
MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTI
EWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH
NASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT
IRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSA
EFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKA
EASATLTVQVGSEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSY
QPPQSTSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPV
IRQGPVNQTVAVDGTLVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLETGVLQIRYAK
LGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNT
VTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRA
ANAYGISDPSQISDPVKTQDVPPTSQGIDHKQVQRELGNVVLHLHNPTILSSSSIEVHWT
VDQQSQYIQGYKILYRPSGANHGESEWLVFEVRTPTKNSVVIPDLRKGVNYEIKARPFFN
EFQGADSEIKFAKTLEEAPSAPPQSVTVSKNDGNGTAILVTWQPPPEDTQNGMVQEYKVW
CLGNETRYHINKTVDGSTFSVVIPSLVPGIRYRVEVAASTGAGAGVKSEPQFIQLDSHGN
PVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIR
KVTYQRGGEAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDSN
LTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFHSPNLKDGRFVN
PSGQPTPYATTQLIQSALSNNMNNGSGDSSEKHWKPPAQQKQEVAPIQYNIMEQNKLNKD
YRANDTVPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADL
LPPPPAHPPPLSNSEEYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRG
AASSPAAVSYSHQSTATLTPSPQEELQPMLQDGPEETGHTQHQPDRRRQPVSPPPPPRPI
SPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESS
VTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQD
ASGRRHFHASQCPRPTSPVSTDSNMSTAVIQKARPAKKQKHQPGHLRREAYTDDLPPPPV
PPPAIKSPTVQSKAQLEVRPVMVPKLPSIEARTDRSSDRKVGSYKGREVLDGRQVTDMRT
NPGDTREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSS
SMSSRGSGSRQREQGNVGRRNIAEMQVLGGYERGEDNNEELEETES
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggagcctgctcacttttacctctttggattaatatgtctctgttcaggctcc
cgtcttcgtcaggaagattttccacctcgcattgttgaacacccttccgacctaattgtg
tcaaaaggagaacctgcaactttgaactgtaaagctgaaggccgccccacacccactatc
gaatggtacaaagggggggagagagtggagacagacaaagatgaccctcgctcacaccga
atgttgctgccaagtggatctttatttttcttacgcatagtacatggacgaaaaagcagg
cctgatgaaggggtctacgtctgtgtagcaaggaattacctcggagaggctgtgagccat
aatgcatcgctggaggtggctatcctacgggatgacttcagacaaaatccttccgatgtc
atggtggcagtgggggagcccgctgtgatggaatgccagccaccacgaggccatcctgag
cccaccatttcatggaagaaagatggctctccactggatgacaaagacgaaagaataact
atacgaggcggaaagctcatgattacttacacccgcaaaagtgatgctggcaagtacgtt
tgtgttggtaccaacatggttggggaacgtgagagtgaagtggcggagcttactgttttg
gagagaccatcgtttgtgaagagacctagtaacttggccgtaactgtggatgacagtgca
gaatttaaatgtgaggcccgaggtgaccctgtgcctacggtacgatggagaaaagacgat
ggagaactgcccaaatccagatacgagatcagagatgatcataccttgaagattcggaaa
gtgatggctggtgacatggggtcatacacttgtgttgcagaaaatatggttggaaaagct
gaagcatcagctactctgactgtccaagttgggtctgaacctccacactttgttgtgaaa
ccccgtgaccaggttgttgccttgggacgaactgtaacgttccagtgtgaagcaaccgga
aatcctcaaccagctattttttggagaagagaggggagtcagaatctgcttttctcatat
cagccaccacagtcaacaagccgcttttcagtctcccagactggtgatctcacaatcact
aacgtccaacgatctgatgttggttattatatctgccagactttaaatgttgccggaagt
atcatcacaaaagcctatttggaagttactgatgtgattgcggaccggcctccccccgtc
attcgacaaggtcctgtgaatcagaccgtagcagtggatggtactttagtgctcagctgt
gtggccacaggcagtccggtgcccacgattctgtggagaaaggatggagtccttgtttca
acccaagattctcgaatcaagcagctggagacgggagtcctgcagatccgatacgctaag
ctgggtgacacaggtcggtacacctgcattgcatcgacccccagtggtgaagcaacttgg
agtgcttacattgaagtccaagaatttggagttccagttcaacctccaagacccaccgac
ccaaatttaatcccaagtgccccctcaaaacccgaagttacagatgtcagcagaaataca
gttacgttgtcatggcaaccaaatttgaactcaggtgcaactccaacatcttacattata
gaagccttcagccatgcatctggtagcagctggcagaccgtagcagagaatgtgaaaaca
gaaacatttgccattaaaggactcaaacctaatgcaatttaccttttcctcgtgagggca
gcaaatgcatatggaattagtgatccaagccagatatcagatccagtgaaaacacaagat
gtccccccaacgagtcagggcatagatcacaagcaggtccagagagaactgggaaatgtt
gtactgcacctccacaaccctaccatcctttcttcctcttcgatcgaagtgcactggaca
gtggaccaacagtctcagtatattcaaggatataaaattctttaccggccatctggagcc
aaccatggtgaatcggagtggttagtttttgaagtgaggaccccaaccaaaaacagcgtg
gttatccctgatctcagaaagggagtcaactatgaaattaaggctcgtcctttttttaat
gaatttcaaggagccgatagtgaaattaaatttgccaaaaccttagaagaagcacccagt
gccccaccccaaagtgtaactgtatcaaagaatgatggaaatggaacagcaattcttgtt
acttggcagcctcctcccgaagacactcaaaatggaatggtccaagagtataaggtttgg
tgtctgggcaatgaaactcgctatcatataaacaagacggtggatggttccaccttttct
gtggtcattccttctctggttccggggatccgatacagagtggaggtggcagccagcacg
ggggccggggctggggtgaagagcgagccacagtttatccagttagattctcacggaaac
cccgtgtcgcctgaagaccaagtcagcctcgctcagcagatctcagacgtggtcaagcag
ccagccttcatcgcaggaattggcgcggcctgttggatcatcctcatggtctttagcatc
tggctctatcgacaccggaagaagagaaatggactgactagtacttacgcaggtatcaga
aaagtaacttatcagagaggaggtgaagctgtgagcagtggagggaggccaggccttctg
aacatcagcgaacctgccacgcagccatggctggcagacacgtggcccaatactggcaac
aaccacaatgactgctccatcaattgctgcacggcaggcaatggtaacagtgatagcaac
ctgaccacctacagtcgcccagctgattgtatagccaattataacaaccaactggataac
aaacaaacaaatctgatgctccctgagtcaactgtttatggtgatgtggaccttagtaac
aaaatcaatgagatgaaaaccttccatagcccaaatctgaaggacgggcgttttgtcaat
ccatcagggcagcccactccttacgccaccacccagctcatccagtcagccctcagcaac
aacatgaacaatggcagtggggactccagcgagaagcactggaaaccgccggcacagcag
aaacaggaagtggccccaattcagtataacatcatggagcaaaacaaactgaacaaagat
tatcgagcaaatgacacagttcctccaactatcccatacaaccaatcatacgaccagaac
acaggaggatcctacaacagttcagaccggggcagtagtacatcggggagtcaagggcac
aagaaaggggcacggacacccaaagtaccgaaacagggtggcatgaactgggcagacctg
cttcctcctcccccggcacaccctcctcctctcagcaatagtgaagagtacagtatttct
gtagatgaaagctacgaccaagaaatgccgtgtcccgtgccaccagcaagaatgtatttg
caacaggatgaactagaagaggaggaagatgaacgaggccccactccccctgtgcgggga
gcagcttcttctccagctgctgtgtcttacagccatcagtccactgccaccctgacccct
tccccacaagaagaactccagcccatgttacaggacggcccggaggagactggccacacg
cagcaccaacccgatcggagacggcagccggtgagcccccctccaccaccaagaccgatt
tccccaccacacacctatggctacatttcaggacctcttgtctcagacatggatacggat
gcaccagaagaggaagaagatgaagcagacatggaagttgccaagatgcagaccagacgg
cttttgctacgtggccttgagcagacccccgcctccagtgtgggggacctggagagctct
gtcactgggtccatgatcaatggctggggctcagcctcagaggaggacaacatttccagt
ggacgctccagcgtgagttcttctgatggctccttcttcaccgatgccgattttgcccag
gcagtcgcagcagccgcggagtatgctggtctgaaggtggcacgccgtcaaatgcaggac
gcttctggccgccgacattttcatgcgtcccagtgccctagacccacaagtcctgtttct
acagacagcaacatgagcactgctgtaatacagaaggccagaccagccaagaagcagaaa
catcagccaggacatctgcgcagagaagcctacacagatgatcttccaccccctccggtg
ccaccacctgctataaagtcacccactgtccaatccaaggcacagctggaggtgcgacct
gtaatggtgccaaaactcccttctatagaagcaagaacagacagatcatcagatagaaaa
gtaggcagttacaaggggagagaagtattggatggaagacaagttactgatatgagaacc
aatccgggtgatacgagagaagcacaggaacagcaaaatgatgggaaaggacgaggaaac
aaggcagcaaaacgagaccttccaccagcaaagactcacctcatccaagaggatattctg
ccttactgtagacctacttttccgacatcaaataatcccagagatcctagttcttcaagc
tcaatgtcgtcaagaggatcaggaagcagacaaagagaacaaggaaatgtaggtcgaaga
aatattgcagaaatgcaagttcttggaggatatgaaagaggagaagataataatgaagaa
ttagaggaaactgaaagctga
DBGET
integrated database retrieval system