Ailuropoda melanoleuca (giant panda): 100474554
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Entry
100474554 CDS
T01329
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04390
Hippo signaling pathway
aml04530
Tight junction
aml05165
Human papillomavirus infection
aml05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
100474554 (SCRIB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100474554 (SCRIB)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100474554 (SCRIB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100474554 (SCRIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_4
PDZ_2
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
100474554
NCBI-ProteinID:
XP_034524624
Ensembl:
ENSAMEG00000006431
LinkDB
All DBs
Position
9:complement(102723077..102752550)
Genome browser
AA seq
1626 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESIKFCKALEIADFSGNPLSRL
PEGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLD
LGGNELEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELG
GLLLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELVLTENL
LTALPRSLGKLTKLTNLNVDRNRLEVLPPEIGGCVALSVLSLRDNRLATLPPELAHTAEL
HVLDVAGNRLRSLPFALTHLNLKALWLAENQAQPMLRFQTEDDAQTGEKVLTCYLLPQQA
PPSLEDLGPQSSPAESWSDAPPSRVSVIQFLEVPACGDDAEGAAAEKRGLQRRATPHPSE
LKVMKRGVEERRGEAYSCRPESGPPSPLEEDKRLSAESGLSEDSQASAGTASQGEPEGPP
TEAQGLSQQEATEETYEEPTVRFAEDTLLLPPGDDGESEEGQLEVPWPLPGGRQRLIRKD
TPHYKKHFKISKLPQPEAVVALLQGTQPDAEGPVGSAGWHNGPHTPWAPRAEEEAEEEAE
EEAEAEEEAAVAEEEKEEAVVSAPSIKGVSFDQANNLLIEPARIEEEELTLTIVRQTGGL
GISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGMALHSAEHQQAVE
ALRGAGATVHMRLWRERMVEPENAVTVTPLRPEDDYSPREWRGPGLRLPLLQPESAGPPR
QRHVACLVRSEKGLGFSIAGGKGSTPYRAGDGGIFISRIAEGGAAHRAGTLQVGDRVLSI
NGVDMTEARHDHAVSLLTAASPTIALLLEREAGGPLPPSPLPHSPPPPIAATTAVVTAIP
GESGPLRLAPSLLAAALEGPYPVEEICLPRAGGPLGLSIVGGSDHSSHPFGIQEPGVFIS
KVLPRGLAARSGLRVGDRILAVNGQDIREATHQEAVSALLRPCLELVLLVRRDPPPPGMR
ELCIQKAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRVGQRLLE
VNQQSLLGLTHGEAVQLLRAVGDSLTVLVCDGFDTSTAAPAEVSPGVIANPFAAGLGRRN
SLESISSIDRELSPEGSGKEKELPGQTPQWGLEAVGQSSESLKLDYRTLAAMPGTTSTQR
VLPGATGGKMAEGPCSPSCQQPSSPPSPDALPTNVKQAYRTFAAVPGPHPPQDTPTQPPT
PGPMASPEQLSFRERQKYFELEVRVPQAEGPPKRVSLVGADDLRKMQEEEARKLQQKRAQ
LLREAEDSGLTLDLDGEAPEEPRPWAGPAAGLSPQSPQPLGGGGAPVRTAKAERRHQERL
RVQSPELSAPVPDRALSPAERRALEAEKRALWRAARMKSLEQDALRAQMVLSKSQEGRSR
RGPLERLAEAPSPAPTPSPTPGEDLGPQTSISPGRLALSGRKFDYRVFAALPSSRPVYDM
QSPDFAEELRSLEPPPSPGLQEEDGEVAMVLLGRHSPGAVGPEEVTLCSSRRPMRPGRRG
LGPVPS
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgcatcccgctgtggcgctgcaaccggcacgtggagtcggtggacaagcgg
cactgttcgctgcaggccgtgcccgaggagatctaccgctacagccgcagcttggaggag
ctgctcctcgacgccaaccagctgcgcgagctgcccaagcccttcttccggctgctgaac
ctgcggaagctgggcctcagcgacaacgagatccagcggctgccccccgaggtggccaac
ttcatgcagctggtggagctggatgtgtcccgcaacgatatccctgagatccccgagagc
atcaagttctgcaaggctctggagattgcagacttcagcgggaaccccttgtctaggctc
cctgaaggcttcactcagctgcgaagcctggctcacctggcgcttaatgatgtgtccctg
caagcgctgcctggggatgtgggcaaccttgccaacctggtgaccctggagctgcgggag
aacctgctcaagtccttgcctgcgtctctttcctttctggtcaagctggaacagctggat
ctgggaggcaatgagctggaagtactgcctgacaccctcggggctctgcccaacctccga
gagctgtggctggaccggaaccagttgtcagcactgcccccggagttggggaacctgcgg
cgcctcgtatgcctggacgtgtcagaaaaccggctggaggagttgcctgcagagcttggc
ggtctgctgctgctcactgacctgctgctgtcccagaacctgctgcagcggcttccggat
ggcatcggtcagctgaagcagctgtccatcctgaaggtggaccagaaccggctgtgtgag
gtgacagaggctatcggcgactgtgagaacctctctgagctcgtgctcacggagaatctg
ctgacggctctgccccgctctctggggaaactgaccaagctgaccaatctcaacgtggac
cggaaccgtctagaggtgttgccaccggagatcggaggctgtgtggcgctcagcgtcctc
tccttaagggacaaccgcctggccaccctgcctcccgagctcgcccacacggctgagtta
catgtgctggacgtggccgggaaccggctgcggagtctgccatttgcgctcacccacctc
aacctcaaggccctatggttggccgagaaccaggcgcagccgatgctccggttccagacg
gaggacgacgctcagacgggcgagaaggtgctcacctgctacctattgccccagcaagcc
ccgcccagcctcgaggatctggggccgcagagcagccctgcggagagctggagcgacgcc
ccgcccagccgtgtcagcgtcatccagttcctggaggtcccagcgtgcggcgacgatgcc
gagggagctgctgctgagaagcggggcctgcagcgccgggccacgcctcaccctagcgag
ctgaaggtgatgaagaggggtgtcgaggaacgtcgaggcgaagcctactcctgcaggcct
gagtccgggccgccctcgcccctggaggaggacaagaggctgagcgccgagtctggtctg
agtgaggactcgcaggcatccgccggcacagcctcccagggtgaacccgaggggccaccg
acggaagcacaggggctgagccagcaggaggccacggaggagacttacgaggagcccaca
gtgcgctttgcggaggacacactgctgctgccccccggggacgatggcgagagcgaggaa
gggcagctggaggtgccctggcccctgcctggtgggagacagcgtctcatccgcaaggac
acacctcactataagaagcacttcaagatttctaagctaccccagcctgaggccgtggtg
gccttgctgcagggaacacagccagatgctgagggccctgtagggtccgcgggctggcac
aacggcccccacacgccctgggctcctcgagccgaggaggaggccgaggaggaggccgag
gaggaggcggaggccgaggaggaggcagcagtggccgaggaggaaaaggaggaagccgtg
gtgtccgcaccgtccatcaagggggtgtcgtttgaccaggccaataacctgctgatagaa
cccgcacgcatcgaggaagaagagctgacgctcaccatcgtgcggcagacggggggcctg
ggtatcagcatcgctggcggtaagggctctacgccctacaaaggggacgacgagggcata
ttcatctctcgggtgtccgaggagggccccgcagctcgggcgggcgtccgagtgggtgat
aagctccttgaggtgaacggcatggccttgcacagcgccgagcaccagcaggctgtggag
gcactgcggggggcgggtgccactgtgcacatgcggctgtggcgggagcgcatggtggag
ccagagaacgcggtcaccgtcacgcctctgcggcccgaggatgactacagtccgcgggag
tggcggggacctggcctgcgcctgcccctgctccagcctgagtccgcggggcccccgcgc
cagcgtcacgtggcctgcctggtgcgcagcgagaaggggctgggcttcagcatcgcgggc
gggaaaggctccacgccttaccgggctggcgatgggggcatcttcatctcccgcatcgca
gaggggggcgctgcccaccgggcgggcactctgcaggtcggcgaccgtgtcctctcgatc
aacggggtggacatgactgaggccaggcacgaccacgccgtctccctgctgaccgccgct
tcccccaccatcgccctgctgctggagcgggaggccggggggccccttccccccagccct
ctgccacactcccccccaccccccattgcagccaccaccgccgtggtcactgccatccct
ggggaatctgggccactgaggctggcccctagcctgctggctgctgccttggaggggcca
taccccgtggaggagatctgcctgccgagagccgggggccccctggggctcagcatcgtt
gggggctctgatcactccagccacccgtttggtatccaggagcctggcgtgttcatctcc
aaggtgctcccacggggcctggctgcacgcagcggcctccgggttggggaccgcatcctg
gcggtgaacgggcaggacatccgggaggccacgcaccaggaggcagtcagtgccctgctt
cggccctgcctggagctggtcttgctcgtgaggagggacccgccacccccgggcatgcgg
gaactctgtatccagaaggcccccggggagaagctgggcatcagcattcgagggggcgcc
aagggccacgcagggaacccctgcgaccccacagatgagggcatcttcatttccaaggtg
agccccacgggagcggccgggcgcgacggccggctgcgggtagggcaacggctgctggag
gtgaaccagcagagcctgttgggcctgacgcacggcgaggccgtgcagctgctgcgtgcg
gtcggcgactccctcaccgtgctcgtctgtgacggcttcgataccagcaccgctgccccc
gctgaggtatccccgggcgtcattgccaacccctttgcggcgggcctcggccgccggaac
agcctggagagcatctcctccatcgaccgggagctgagccccgagggctctggcaaggag
aaggagctgccgggacagaccccacagtggggactggaggccgtgggtcagagctcggag
agcctcaagctggattaccgcaccctagccgccatgcccggcaccaccagcacgcagagg
gtactgcctggggcgacaggagggaagatggctgagggcccctgctcccccagctgccag
cagccctcgtccccaccctctcccgacgcactgcccaccaacgtgaagcaggcctacagg
accttcgctgctgtgcctggcccacaccccccgcaggacacccccacccagccccccacc
cctgggcccatggcctccccggagcagctgtctttccgtgagcggcagaaatattttgag
ctagaggtgcgggtgccccaggccgagggcccccccaagcgcgtgtcgctggtgggtgcc
gacgacctgcgcaagatgcaggaggaggaagcgcggaagctgcagcagaagagggcacag
ttgctgcgggaggccgaggacagcgggctcaccctggacctggacggggaggcccccgag
gagccacggccctgggccggccctgccgcagggctcagcccccagtccccccagcccctc
ggaggaggcggcgccccggtgcgcacggccaaagccgagcggcgccatcaggagcggctg
cgcgttcagagcccggagctgtcggcgcctgtgcccgatcgggctctgtcccctgccgag
cggcgggccctggaggccgagaagcgcgcgctgtggagggcagccaggatgaagtccctg
gagcaggacgccctccgtgcgcagatggtcctcagcaagtcccaggagggccggagcagg
cgtgggcccctggagcggctggccgaggccccctcgcccgcgcccaccccatcgcccaca
cccggggaagacctcgggccccagaccagcatctcccccggacgcctggccttgtctggg
aggaagtttgactacagggtgtttgcagccctcccttcttccagacctgtctatgacatg
cagtccccagattttgctgaggagctgaggtccctagaaccgcctcccagccccggcctg
caggaggaggacggagaggtggccatggtgcttctgggcaggcactcgccaggcgccgtg
ggccccgaggaggtgaccctgtgcagcagccgccgcccaatgcggcccgggcgccggggc
cttgggccagtgccctcctag
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