Ailuropoda melanoleuca (giant panda): 100478037
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Entry
100478037 CDS
T01329
Symbol
PCGF6
Name
(RefSeq) polycomb group RING finger protein 6 isoform X1
KO
K11470
polycomb group RING finger protein 6
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03083
Polycomb repressive complex
aml04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100478037 (PCGF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100478037 (PCGF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100478037 (PCGF6)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100478037 (PCGF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
RAWUL
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-RING_6
zf-RING_10
TRAF3_RING
zf-C3HC4_4
BUD22
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
100478037
NCBI-ProteinID:
XP_002913942
Ensembl:
ENSAMEG00000017916
LinkDB
All DBs
Position
6:complement(104276919..104308934)
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AA seq
349 aa
AA seq
DB search
MERVSVVAGSAGAAKAEGAAAMPPPPAVSPPALTPAPAAGEEGPPPLPEAGAPGCSGSRP
PELEPERSLGRMRGRFEDEDDELEEDEELEEEEEEEEEEMSHFSLRLEGGRPDSEDEEER
LINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQP
LYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKERGLEVPKPAVPQPVPSSKGRSKKVL
ESVFRIPPELDMSLLLEFIGANEGTGHFKPLEKKFVRVSGEATIGHVEKFLRRKMGLDPA
CQVDIICGDHLLEQYQTLREIRRAIGDAAMQDGLLVLHYGLVVSPLKIT
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtctcggtggtcgcggggagtgcgggcgccgccaaggccgagggagctgca
gccatgccgcccccgcctgccgtctccccccccgctctcaccccggcaccagcagccggt
gaggagggcccgccgcctttgcccgaggcgggggctccaggctgctccggctcccggccc
cctgagttggagcccgagcgcagcctgggccgcatgaggggccgtttcgaggacgaggac
gacgagttggaagaggatgaggagctggaggaggaagaggaggaggaggaggaagagatg
agccacttctcgctgaggctggaggggggtcggccggactcggaggacgaggaggagcgc
ctcattaatctctctgagctgacaccatacatcttgtgttccatatgcaaaggttactta
atagatgcaactaccattacagaatgtcttcatacgttttgtaaaagctgcatagtaaga
catttttactatagcaacagatgtccaaaatgcaacatagtggtacatcagacacaacct
ctttataacataaggttggaccgacaattacaagacatagtgtacaaattagtgatcaat
ctagaggaaagagaaaaaaagcaaatgcatgatttctataaagaaagaggtctagaagta
cctaaacctgctgttccacagccagtcccttcgagcaaaggaagatctaagaaagtccta
gaatcagtgtttcgtattccacctgaacttgatatgtctttattactagagttcattggt
gctaatgaaggcacgggacattttaagccgttggagaagaagtttgtccgagtttcagga
gaagcaactattgggcatgtagaaaaattcctcagaagaaaaatgggtcttgatccagct
tgtcaggtagatatcatctgtggtgatcacttgttggagcagtatcaaactctaagggaa
attcgacgtgcgatcggtgatgcagcaatgcaggatggtctgctggtccttcattatggt
cttgtagtttcccccttaaaaattacttga
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