KEGG   Ailuropoda melanoleuca (giant panda): 100482250Help
Entry
100482250         CDS       T01329                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml00310  Lysine degradation
aml04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:aml00001]
 Metabolism
  Amino acid metabolism
   00310 Lysine degradation
    100482250 (SETDB1)
 Cellular Processes
  Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    100482250 (SETDB1)
Enzymes [BR:aml01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     100482250 (SETDB1)
Chromosome [BR:aml03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     100482250 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100482250 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Pre-SET MBD DUF4537 53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID: 100482250
NCBI-ProteinID: XP_019655337
Ensembl: ENSAMEG00000001160
LinkDB All DBs
Position
Un
AA seq 1288 aa AA seqDB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASQPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTGTGTQFKPMEPXAPPVPPAPPAPPLSPQAGDNDSLESQLA
QSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVPAGKLGSNQTYRSPLGSTASAPAAPP
APAAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSAQYRGKNPLLVP
LLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDPY
VLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTGP
EFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYECNK
RCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFAD
KEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESND
DSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSRPPDLGPPHIPVPPVI
PVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEGRAGGGRGEAEK
ASTSGPGFKDEGDIKQAKKEDPDDRNKMAIVTESSRNYGYNPSPMKLEGLRRPPSKTSMH
QSRRLMASAQSNTDDVLTLSSSTESEGESGTSRKPTTGQTSATAVDSDDIQTISSGSEAD
DFEDKKNMSGPTKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNTRQFYDG
EESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTW
DYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3867 nt NT seq  +upstreamnt  +downstreamnt
atgtcctccctccctgggtgcattggtttggatgcagcaacagctgcagtggagtctgaa
gagattgcagagctgcaacaagctgtggttgaggagctgggtatctcgatggaggaactt
cggcagttcatcgatgaagaactagaaaagatggactgtgtacaacagcgtaagaagcaa
ctagcagagttggaaacgtgggtaatacagaaggaatctgaggtggcccatgttgaccag
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggtctgcaataccgggacagtagctctgaggatgaagcttcccagcctaca
gaaataatcgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactcccaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaggatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggatcta
cataaaggaaccttgagtcagatgtctggagaactgagcaaagatggtgacctgatagtc
agcatgcgcatcctgggcaagaagagaactaagacatggcacaaaggcacccttattgcc
atccagacggttggaccaggaaagaagtacaaggtgaaatttgacaacaaaggaaagagt
ctactgtcggggaaccatattgcctatgattaccaccctcctgctgacaagctgttcgtg
ggcagtcgagtggtggccaaatacaaggatgggaaccaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgacggc
tatgcttcctacgtcacacagtctgaactatatcccatttgtcggccactgaaaaagact
tgggaggacatagaagacatctcctgccgggacttcatagaagagtatatcacggcttac
cccaaccgtcccatggtgctgctcaagagtggccagcttatcaagactgagtgggaaggc
acatggtggaagtctcgggtcgaagaggtggacggcagcctagtcaggattctcttcctg
gatgacaaaagatgtgaatggatctatcgaggctctacacggctagagcccatgttcagc
atgaagacttcctcagcctctgcattggagaagaagcaagggggacagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggccctgtggtccaatacacccaggatctgacc
ggtactgggacccagttcaagccaatggagccnnctgcgccccctgtcccacctgcccca
cctgctccccctctgtccccacaggcaggtgacaatgacagcttggaaagtcagcttgcc
caatctcggaagcaggtagccaaaaagagcacatccttccggccaggatctgtgggctct
ggtcattcctcccctacatctcctgcactcagtgaaaatgtccctgctgggaaacttggc
agcaaccagacgtacaggtcacctttaggttcaacagcctctgccccagcagcaccccca
gcacccgcagcaccgcccgccttccacggcatgctggagcgggccccagcagagccctcc
taccgcgcccccatggagaagctcttctacttacctcatgtgtgcagctatacgtgtctg
tcccgagtcagacctatgagaagtgcgcagtaccggggcaagaatcctctgcttgtccca
cttctctatgacttccggcggatgacggcccgccgccgagttaaccgcaagatgggcttt
catgttatctataagacaccctgtggcctctgccttcggacaatgcaggagatcgaacgc
tatctttttgagactggctgtgacttcctcttcctggagatgttctgtttggatccatat
gttcttgtggaccgaaagtttcagccctataaacctttttactatattttggacatcact
tacgggaaggaagatgttcccctctcctgtgtcaatgagattgacacaacccccccaccc
caggtggcctacagtaaggaacgaatcccgggcaagggtgttttcattaacacaggccca
gaatttctggttggttgtgactgcaaggacgggtgccgtgacaagtccaaatgtgcctgt
catcagctaactatccaggccacagcctgcaccccgggcggtcagatcaaccctaactct
ggctaccagtataagagactagaagagtgtctgcccacaggagtttatgagtgtaacaaa
cgctgcaaatgtgacccaaacatgtgcacaaaccggctggtgcagcatggactccaggtt
cggctacagctattcaagacgcagaacaagggctggggtatccgctgcttggatgacatt
gccaaaggctcctttgtctgtatttatgcaggcaagatcctgacagatgactttgcagac
aaggagggcctggagatgggtgatgagtactttgccaatctggaccatatcgagagcgtg
gagaacttcaaggaaggatatgagagtgatgccccctgttcctctgacagcagcggggtg
gacttgaaagaccaggaagatggcaacagtggtacagaggatcccgaggagtccaatgac
gacagctctgatgataacttctgtaaagatgaggacttcagcaccagctccgtgtggcgc
agctatgctacccggcggcagacccggggccaaaaggagaacggactgtctgagacagct
tccaaggactcccgccccccagaccttggccccccacatattcctgtccctccagtgatc
cctgtaggtggctgcaatccaccctcctctgaagagacacccaagaacaaggtggcctcg
tggttgagctgcaatagtgtcagtgaaggtggctttgccgactctgatagccgttcatcc
ttcaagactagcgaaggtggggaaggccgggctgggggaggccgaggggaggctgagaag
gcctccacttcagggccgggcttcaaggatgagggagacatcaagcaggcaaagaaagag
gaccccgatgaccgaaacaagatggcaatagttactgaaagctctcgaaattatggttac
aatccttctcccatgaagcttgaaggacttcgccgcccacctagtaagactagtatgcat
cagagccgacgactcatggcctctgctcagtccaacactgatgatgtcctaacattgtcc
agcagcacagaaagcgagggggagagtgggaccagccggaagcccaccactggtcagact
tcagccacggcagtggatagcgatgatatccagaccatctcctctggctccgaagcagat
gactttgaggacaagaagaacatgtctggtccgacaaagcgccaggtggcggtaaaatca
acccgaggctttgctcttaagtcaacccatgggattgccattaaatcaaccaacatggca
tccgtggaaaagggggagagtgcacctgttcgtaagaacacacgccagttctacgatggg
gaagagtcttgctacatcattgatgccaagctcgaaggcaacctgggccgctacctcaat
catagctgcagccccaacctgtttgtccagaatgtcttcgtggacactcacgatcttcgc
ttcccctgggtggccttctttgccagcaagaggatccgggctgggacagagctcacttgg
gactacaactacgaggtgggcagcgtggaaggcaaggagctgctctgctgctgcggggcc
atcgaatgcagagggcgtcttctttag

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