Ailuropoda melanoleuca (giant panda): 100483517
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Entry
100483517 CDS
T01329
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100483517 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100483517 (CNOT2)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100483517 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100483517 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
100483517
NCBI-ProteinID:
XP_002922230
Ensembl:
ENSAMEG00000011938
UniProt:
G1LZS8
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All DBs
Position
15:44988617..45106996
Genome browser
AA seq
540 aa
AA seq
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MVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDMLA
SPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMS
LHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQ
PSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRRE
GSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKDPTSSNDDSKS
NLNTSGKTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGL
LTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSE
YLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWIT
RAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggactgatggacatacattatctgagaaaagaaactaccaggtgacaaacagc
atgtttggtgcttcaagaaagaagtttgtagagggggtcgacagtgactaccatgacgaa
aacatgtactacagccagtcttctatgtttccacatcggtcagaaaaagatatgctggct
tcaccatctacatcaggtcagctgtctcagtttggggcaagtttatacgggcaacaaagt
gcactaggccttccaatgagggggatgagcaacaatacccctcaattaaatcgcagctta
tcacaaggcactcagttaccgagccacgtcacgccaacaacaggggtaccaacaatgtca
cttcacacgcctccatctccaagcaggggtattttgcctatgaatcctaggaatatgatg
aaccactcccaggttggtcagggcattggaattcctagcaggacaaatagcatgagcagt
tcagggttaggtagccccaacagaagctcgccaagcataatatgtatgccaaagcagcag
ccttctcgacagccttttactgtgaacagtatgtctggatttggaatgaacaggaatcag
gcatttggaatgaataactccttatcaagtaacatttttaatggaacagatggaagcgaa
aatgtgacaggattggacctttcagattttccagcattagcagaccgaaacagaagggaa
ggaagtggtaacccaactccattaataaaccccttggctggaagagctccttatgttgga
atggtaacaaaaccagcaaatgagcaatcccaggacttctcaatacacaacgaagatttt
ccagcattacctggttccagctataaagatccaacatcaagtaatgatgacagtaaatct
aatttgaatacatctggcaagacaacttcaagtacagatggacccaaattccctggagat
aaaagttcaacaacacaaaataataaccagcagaaaaaagggatccaggtgttacctgat
ggtcgggttactaacattcctcaagggatggtgacggaccaatttggaatgattggcctg
ttaacgtttatcagggcagcagagacagacccaggaatggtacatcttgcattaggaagt
gacttaacaacattaggcctcaatctgaattctcctgaaaatctctaccccaagtttgca
tcaccctgggcatcttcaccttgtcgacctcaagacatagacttccatgttccatctgag
tacttaacgaacattcacattagggataagctggctgcaataaaacttggccgatatgga
gaagacctgctcttctatctctattatatgaatggaggagacgtattacaacttttagct
gcagtagagctttttaaccgtgattggagataccacaaagaagaacgagtatggattacc
agggcaccaggcatggagccaacaatgaaaaccaatacatatgagaggggaacatattac
ttctttgactgtcttaactggaggaaagtagctaaggagtttcatctggaatatgacaaa
ttagaagaacggcctcacctgccatccaccttcaactacaaccctgctcagcaagccttc
taa
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